My plasmodium targets

Posted by Fernan Aguero on 2007-05-31 06:34:32

WARNING: This list was made prior to the version 4 release of TDR Targets (Aug, 2010). Some queries included in this list may not work properly. Most likely reasons for this are changes in parameters, and/or data updates. If you experience any problem, please try re-running each search from the search page. You can also access the previous version of the database at v3.tdrtargets.org

This is a set of public queries intented to illustrate how to
share lists of targets and query sets.

This set contains 4 queries that return different lists of Plasmodium
genes: enzymes (genes with any EC number); genes absent in human/mouse;
genes that orthologs in Mycobacterium that are essential; and genes
that have orthologs in E. coli that are essential.

Finally, a fifth query is also included in the published set that
is the result of ranking all the genes retrieved by these 4 queries.

The UNION of queries 1-4 has been ranked according to the following
scoring scheme:
Plasmodium enzymes: 20
Plasmodium absent in human/mouse: 50
Plasmodium essential in Mycobacterium: 30
Plasmodium essential in E. coli: 30

All the scores are additive.

Feel free to use these queries for your own good.

Queries in this set

Click on the links below to browse the contents of each query. You can also use the checkboxes to select queries you would like to import into your history.
Import ranked queries into your history to redo the scoring strategy

Select: All, None.

  Ranked list of the genes in this set (3974 records). Show parameters.

  Plasmodium enzymes (574 records). Show parameters.

  Plasmodium genes absent in mammals (3468 records). Show parameters.

  3: Plasmodium genes essential in Mycobacterium (236 records). Show parameters.

  Plasmodium genes essential in E. coli (174 records). Show parameters.