Arabidopsis thaliana (thale cress): AT1G20480
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Entry
AT1G20480 CDS
T00041
Name
(RefSeq) AMP-dependent synthetase and ligase family protein
KO
K10526
OPC-8:0 CoA ligase 1 [EC:6.2.1.-]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00592
alpha-Linolenic acid metabolism
ath01100
Metabolic pathways
ath01110
Biosynthesis of secondary metabolites
Module
ath_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
AT1G20480
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
838636
NCBI-ProteinID:
NP_173472
TAIR:
AT1G20480
UniProt:
Q84P25
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Position
1:complement(7094833..7097147)
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AA seq
565 aa
AA seq
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MAVKHGVDGDGSEIESRTLAVDRKSGFCESTSIFYSKREPMALPPNQFLDVTSFIASQPH
RGKTVFVDAVTGRRLSFPELWLGVERVAGCLYALGVRKGNVVIILSPNSILFPIVSLSVM
SLGAIITTANPINTSDEISKQIGDSRPVLAFTTCKLVSKLAAASNFNLPVVLMDDYHVPS
QSYGDRVKLVGRLETMIETEPSESRVKQRVNQDDTAALLYSSGTTGTSKGVMLSHRNLIA
LVQAYRARFGLEQRTICTIPMCHIFGFGGFATGLIALGWTIVVLPKFDMAKLLSAVETHR
SSYLSLVPPIVVAMVNGANEINSKYDLSSLHTVVAGGAPLSREVTEKFVENYPKVKILQG
YGLTESTAIAASMFNKEETKRYGASGLLAPNVEGKIVDPDTGRVLGVNQTGELWIRSPTV
MKGYFKNKEATASTIDSEGWLKTGDLCYIDGDGFVFVVDRLKELIKCNGYQVAPAELEAL
LLAHPEIADAAVIPIPDMKAGQYPMAYIVRKVGSNLSESEIMGFVAKQVSPYKKIRKVTF
LASIPKNPSGKILRRELTKLTTSKL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcggttaagcacggcgtcgacggcgacggcagcgaaatcgaatcgagaactctggcg
gtagatcgaaaaagcggtttctgcgaatcaacatcgatattctacagcaaacgtgagcca
atggctctcccgccaaaccaatttctcgacgtcacgtctttcattgcatcacagcctcat
cgcggcaaaaccgtattcgtcgacgccgtaaccggtcgtcgactaagcttccctgagctc
tggctcggtgtcgaaagagtcgcgggttgtctttacgcattaggtgtacgcaaaggaaat
gtcgtcattatactctctccaaactcaatcctcttcccgatcgtctccctctccgtaatg
tcactcggcgcaatcataaccaccgctaatccgatcaacacgtccgacgaaatctccaaa
cagataggcgattcgcgtcctgttctcgccttcaccacatgcaaactcgtctccaaactc
gccgccgcgtcgaattttaatctcccggtggttctcatggacgactaccacgttccttcg
caaagttacggtgaccgcgtgaaactagtcgggaggttagagacgatgattgaaacagaa
ccgagtgagtcacgagttaagcaacgagtcaaccaggacgacacggcggctctgttatac
tcatcaggtacgacggggacgagtaaaggagtaatgctgagtcaccgtaacctaatcgca
ttggtacaagcataccgggcccggttcggtttagagcagcgaaccatttgcacaatccca
atgtgtcacatcttcggattcggtggtttcgcgacggggctaatcgcgttaggatggaca
atcgttgttcttcctaaattcgacatggctaagcttctctcggcggtggagactcatcgt
tcttcgtacctttctcttgtaccgccgattgtagtagctatggttaacggagcaaatgag
attaattccaagtatgatctgagctcgttgcacactgtggtggctggaggagctccgttg
agtagagaggtgacggagaagttcgttgagaattatcccaaggttaagatcctacaaggg
tatggtttgactgagtcaacggctatagctgcttctatgtttaataaagaggagactaag
aggtatggagcttctggcttactggctccgaatgtggaaggtaagattgtggatccggat
acgggtcgggttttgggtgtgaatcaaacgggtgagctgtggattcgaagtcctactgtg
atgaaaggttatttcaagaataaagaagctactgcttctaccattgattcagaaggatgg
ttgaaaactggagatttgtgttacattgacggtgatgggtttgtctttgttgttgataga
ttaaaggagctcatcaaatgcaatggttatcaggttgctccagctgaactagaggcattg
ttgcttgctcatccagagattgctgatgcagcagtaatacccatccctgacatgaaagct
gggcaatatccaatggcatatatcgtaagaaaagttggaagtaacttatccgagagcgaa
atcatgggatttgtcgcaaaacaggtatcaccgtacaagaagattcgcaaagtcacattt
ttggcttcaatccccaaaaatccttcgggcaagattttaagaagagaacttacaaagctc
acaacttcaaaactctag
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