KEGG   Arabidopsis thaliana (thale cress): AT1G20010
Entry
AT1G20010         CDS       T00041                                 
Symbol
TUB5
Name
(RefSeq) tubulin beta-5 chain
  KO
K07375  tubulin beta
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04145  Phagosome
ath04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:ath00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    AT1G20010 (TUB5)
  09142 Cell motility
   04814 Motor proteins
    AT1G20010 (TUB5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ath03036]
    AT1G20010 (TUB5)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ath04812]
    AT1G20010 (TUB5)
   04147 Exosome [BR:ath04147]
    AT1G20010 (TUB5)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     AT1G20010 (TUB5)
Cytoskeleton proteins [BR:ath04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    AT1G20010 (TUB5)
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   AT1G20010 (TUB5)
  Exosomal proteins of colorectal cancer cells
   AT1G20010 (TUB5)
  Exosomal proteins of bladder cancer cells
   AT1G20010 (TUB5)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 Misat_Tub_SegII Tubulin_2 DUF6684
Other DBs
NCBI-GeneID: 838590
NCBI-ProteinID: NP_564101
TAIR: AT1G20010
UniProt: P29513 A0A178W9M8
LinkDB
Position
1:complement(6937719..6940832)
AA seq 449 aa
MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY
VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV
VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV
VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCS
LRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNM
MCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPPK
GLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
AEYQQYQDATADEEGEYDVEEEEEGDYET
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgagagagatccttcacattcaaggtggtcaatgcggtaaccagattggttccaagttc
tgggaagtcatctgcgacgagcacggcatcgattccaccggacgttacagtggagacact
gcagatctccagcttgaacgtatcaatgtctattacaatgaagcttcaggtggaagatac
gttcctcgtgctgttcttatggatcttgagcctggtactatggatagtatcagatccgga
ccgtttggtcagatcttccgtcctgataactttgtctttggtcagtctggtgctggtaat
aattgggctaaaggtcattacactgaaggtgctgaacttattgatgctgttcttgatgtt
gttcgtaaagaagctgagaactgcgattgccttcaagggtttcaggtgtgccattcgttg
ggaggaggcacaggttcaggaatgggaacactattgatatcgaagatccgagaggagtat
ccagacagaatgatgctcactttctctgttttcccatctcctaaagtctctgacacagtc
gttgagccttacaatgcaactctctctgtccatcagcttgtagagaacgctgatgaatgc
atggtcctcgacaatgaagctctctacgatatctgcttccgtaccctcaaactcagcact
cctagctttggagacttgaaccatttgatctccgcaacaatgagcggtgtgacttgctcc
ttaaggttccccggacaactaaactctgacctcaggaaactcgcggtgaacctaatccca
ttccctcgtctccatttcttcatggtgggttttgcgcccctcacttcccgtggctcgcaa
caatacatctcactcaccgttcctgagctgactcaacaaatgtgggactccaaaaacatg
atgtgtgcagctgatccacgtcacggacgttacctcacagcctctgctattttcagagga
cagatgagcacaaaagaagtcgacgagcaaatcctaaacatacagaacaagaactcgtct
tacttcgttgagtggatcccaaacaacgtgaaatccagcgtttgtgatatcccaccaaag
gggctcaaaatggcggcgacgtttgtgggtaactcgacgtcgattcaagaaatgttcagg
agagtgagtgagcagttcacggctatgtttaggcgtaaagcgtttctgcattggtacaca
ggagaaggaatggacgaaatggagtttacggaagctgagagcaatatgaatgatttggtc
gctgaataccaacagtaccaagatgctactgctgatgaggaaggtgagtatgatgttgaa
gaagaagaggagggagattatgagacttga

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