Arabidopsis thaliana (thale cress): AT3G16980
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Entry
AT3G16980 CDS
T00041
Symbol
NRPB9A
Name
(RefSeq) RNA polymerases M/15 Kd subunit
KO
K03017
DNA-directed RNA polymerase II subunit RPB9
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03020
RNA polymerase
ath03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AT3G16980 (NRPB9A)
09124 Replication and repair
03420 Nucleotide excision repair
AT3G16980 (NRPB9A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT3G16980 (NRPB9A)
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT3G16980 (NRPB9A)
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
AT3G16980 (NRPB9A)
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
AT3G16980 (NRPB9A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_C
RNA_POL_M_15KD
zinc_ribbon_4
DNA_RNApol_7kD
Motif
Other DBs
NCBI-GeneID:
820954
NCBI-ProteinID:
NP_188323
TAIR:
AT3G16980
UniProt:
Q6NLH0
A0A178VJH2
Structure
PDB
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All DBs
Position
3:5794392..5795827
Genome browser
AA seq
114 aa
AA seq
DB search
MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHSVSERTQILT
DVASDPTLPRTKAVRCSKCQHREAVFFQATARGEEGMTLFFVCCNPNCGHRWRE
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgagtactatgaaattttgccgcgaatgtaataacattctgtatcctaaggaggacaaa
gaacagaagatcctcctctatgcttgccgtaattgtgatcaccaggaggtagctgataac
agctgtgtgtacagaaacgaggttcatcactctgtaagtgagcgaactcagatcttaaca
gacgtggcttctgaccctactcttccccgaaccaaggctgtgcgttgctctaagtgtcag
catagggaggccgttttcttccaggctacggctagaggtgaagaaggaatgacactgttc
tttgtctgttgcaacccgaattgtggtcatcgctggagagaataa
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