Caenorhabditis elegans (nematode): CELE_T27A3.2
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Entry
CELE_T27A3.2 CDS
T00019
Symbol
usp-5
Name
(RefSeq) Ubiquitin carboxyl-terminal hydrolase
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cel01002
]
CELE_T27A3.2 (usp-5)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cel04121
]
CELE_T27A3.2 (usp-5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cel04147
]
CELE_T27A3.2 (usp-5)
Enzymes [BR:
cel01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
CELE_T27A3.2 (usp-5)
Peptidases and inhibitors [BR:
cel01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
CELE_T27A3.2 (usp-5)
Ubiquitin system [BR:
cel04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
CELE_T27A3.2 (usp-5)
Exosome [BR:
cel04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CELE_T27A3.2 (usp-5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
zf-UBP
UBA
UCH_1
Motif
Other DBs
NCBI-GeneID:
172296
NCBI-ProteinID:
NP_001391078
WormBase:
WBGene00020839
LinkDB
All DBs
Position
I:6110134..6114549
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AA seq
791 aa
AA seq
DB search
MDVETAVRSAVDAGAFIRPTFDQKIFKDQCAYCFKDPHGKDGLYISLKNYHAFCREHAEI
YGTTSGNTLFVQFESTKKIIEERTDGEPTSKMTKLTIDSDPKFEFEDKYCVVVHPEYSQQ
VKNVQNLPEIAEAIAQIANTTSAERLSLLSSTSNAWDAEIKLITKHQNLEQQDNGKHLAL
TGWTCEVEGCGLNDNLWLNLTDGAVRCGRSQFLSDGKKTNGNGHMQDYFDSTRFPLVVKL
GTISSNLELIDVYSYDEDDAVIDPNLEKHLKHFGLDPTKMEKTAKSTMEMELDMNEKWEW
SKCTEDGLLLEPIFGPGYTGLVNTGSSCYMNSVLQALVTVDSFQTRYGEQGLETLVNCPL
DKLHNDFNAQFSKVVRAMLSGDYSSEMDPTNNHIKPLQFKRVAAGNHRDFSTSKQQDVEE
YIRFLFEKIAENSRTEVIDPTDSFKFKAINRFEDRGTRRVRYTDQEEMLIRLPISGVKDL
LRPIPDTENRYSVDMKAAIHAYFDVQKIDDYISPITGEPKGATNTISMKTFPDYLFFQVS
KFAYNVDGTQKKLDMELEIEEELDLSGYRGHGKLEHEIALPDEEPTAPRTTPDIPASVRF
VAGELMLMGFCENACYRAAYYSNGNVEIASNWLMEHMDDSDINDLFVIPSGTPSARGEVD
PNLVASIVEMGFSNHQAKYALKQVPTVAEAVEWLFANMDSIPVESAAVGLSSDAPEPSVT
ESATQKTFKDGGEKYKLIGMISHMGSRPDSGHYVAHMLKEGKWVLFNDEKVALSQDPPKK
LAYVYLYKRIA
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgaaaccgccgttcgttctgctgttgatgccggcgcgttcattcgtccaact
ttcgaccagaaaatcttcaaggatcagtgcgcgtactgtttcaaagacccacacggaaaa
gatggtctctacattagtctgaagaactatcacgctttttgccgcgagcacgcagaaatc
tacggaacaacctctggaaacactctttttgtacaatttgagtccacaaagaaaataatt
gaagaaagaaccgatggggagccaacgagcaagatgaccaagctcacaatcgattcagat
ccaaagtttgaatttgaggacaaatactgtgttgttgttcacccagaatactcgcagcag
gtgaaaaatgtgcagaatcttccggaaattgctgaagcaattgcacaaattgccaacacg
acaagtgccgaacgcctgtcacttctctcatcaaccagtaatgcgtgggatgccgagatc
aagcttatcactaagcatcaaaatctcgagcaacaagacaacggaaagcacctcgctctt
actggatggacttgtgaagttgagggatgcggacttaatgataatctgtggctcaatttg
accgatggagctgtacggtgtgggcggagccaatttttgtccgatgggaagaagacgaat
ggaaatggacatatgcaagattatttcgattctacgagattcccacttgtggtaaagctc
gggacaatctcctcaaaccttgaattgattgatgtctacagttatgatgaagacgatgca
gttattgatccaaatttggagaagcatctgaaacatttcggacttgacccaacaaaaatg
gagaaaactgcgaaaagtacgatggagatggaattggatatgaatgagaagtgggaatgg
tcaaaatgcacagaggatggtcttttattggaaccaatatttggaccaggatatacggga
cttgtgaatactggaagcagttgttatatgaattcagttcttcaagctcttgtcacagtc
gactcattccaaactcgttacggtgagcagggtctcgagacgcttgtcaactgtccactt
gacaaacttcacaatgatttcaacgctcaattttcaaaagttgtccgcgcgatgctcagt
ggtgactattcatccgaaatggatccgactaataatcacatcaaaccgcttcaattcaaa
cgagttgctgctggaaatcatcgagatttctccacttcgaagcaacaagatgttgaggaa
tatattcgtttcctcttcgagaaaatcgccgaaaactcgagaaccgaagtgattgaccca
accgattcgttcaaattcaaagcaatcaatcgcttcgaggatagaggaactcgtagagtc
agatacactgatcaggaggaaatgctcattcgtcttccaatttctggggttaaggatctt
ctacgcccgattccggacactgaaaatcgttattcggtcgacatgaaagctgcaattcat
gcatattttgatgttcaaaagattgatgactatatatcaccaatcactggagaaccaaaa
ggagccaccaacactatttctatgaagactttccccgattatttgttcttccaagtttcg
aaattcgcttacaacgtcgacggaactcaaaagaaacttgacatggagctggaaatcgaa
gaggaattggatctcagtggatatcgaggacatggaaagttggaacatgagattgctctt
ccagatgaggaaccaactgctccacgaacaactccagatattccagcaagtgttcgtttt
gttgctggagagcttatgttgatgggattctgtgagaatgcgtgctacagagcagcttat
tattccaatggaaatgtggagattgcatcaaactggctcatggagcatatggacgactct
gatatcaatgatttgtttgtgattccatctggaactccatcagctcgtggagaagtcgat
ccgaatcttgtcgcgtcgattgttgaaatgggattctctaatcatcaagcaaagtatgct
ttgaagcaggtgccgactgttgcagaggctgttgaatggctttttgccaatatggatagt
atcccagtagagtcagccgccgtcggtctaagctcggatgctccagagccgtctgtcaca
gaatcggcaactcaaaagacattcaaggatggtggagagaaatataagttgattgggatg
atttctcatatgggatcacgtcctgattctggtcattacgtagctcacatgctcaaagag
ggaaaatgggttctcttcaatgacgaaaaagttgcactctcccaggatccaccaaaaaag
ttggcctatgtctacctgtacaagcgaatcgcctaa
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