KEGG   Caenorhabditis elegans (nematode): CELE_T27A3.2
Entry
CELE_T27A3.2      CDS       T00019                                 
Symbol
usp-5
Name
(RefSeq) Ubiquitin carboxyl-terminal hydrolase
  KO
K11836  ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12]
Organism
cel  Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cel01002]
    CELE_T27A3.2 (usp-5)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cel04121]
    CELE_T27A3.2 (usp-5)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cel04147]
    CELE_T27A3.2 (usp-5)
Enzymes [BR:cel01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     CELE_T27A3.2 (usp-5)
Peptidases and inhibitors [BR:cel01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   CELE_T27A3.2 (usp-5)
Ubiquitin system [BR:cel04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    CELE_T27A3.2 (usp-5)
Exosome [BR:cel04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CELE_T27A3.2 (usp-5)
SSDB
Motif
Pfam: UCH zf-UBP_var zf-UBP UBA UCH_1
Other DBs
NCBI-GeneID: 172296
NCBI-ProteinID: NP_001391078
WormBase: WBGene00020839
LinkDB
Position
I:6110134..6114549
AA seq 791 aa
MDVETAVRSAVDAGAFIRPTFDQKIFKDQCAYCFKDPHGKDGLYISLKNYHAFCREHAEI
YGTTSGNTLFVQFESTKKIIEERTDGEPTSKMTKLTIDSDPKFEFEDKYCVVVHPEYSQQ
VKNVQNLPEIAEAIAQIANTTSAERLSLLSSTSNAWDAEIKLITKHQNLEQQDNGKHLAL
TGWTCEVEGCGLNDNLWLNLTDGAVRCGRSQFLSDGKKTNGNGHMQDYFDSTRFPLVVKL
GTISSNLELIDVYSYDEDDAVIDPNLEKHLKHFGLDPTKMEKTAKSTMEMELDMNEKWEW
SKCTEDGLLLEPIFGPGYTGLVNTGSSCYMNSVLQALVTVDSFQTRYGEQGLETLVNCPL
DKLHNDFNAQFSKVVRAMLSGDYSSEMDPTNNHIKPLQFKRVAAGNHRDFSTSKQQDVEE
YIRFLFEKIAENSRTEVIDPTDSFKFKAINRFEDRGTRRVRYTDQEEMLIRLPISGVKDL
LRPIPDTENRYSVDMKAAIHAYFDVQKIDDYISPITGEPKGATNTISMKTFPDYLFFQVS
KFAYNVDGTQKKLDMELEIEEELDLSGYRGHGKLEHEIALPDEEPTAPRTTPDIPASVRF
VAGELMLMGFCENACYRAAYYSNGNVEIASNWLMEHMDDSDINDLFVIPSGTPSARGEVD
PNLVASIVEMGFSNHQAKYALKQVPTVAEAVEWLFANMDSIPVESAAVGLSSDAPEPSVT
ESATQKTFKDGGEKYKLIGMISHMGSRPDSGHYVAHMLKEGKWVLFNDEKVALSQDPPKK
LAYVYLYKRIA
NT seq 2376 nt   +upstreamnt  +downstreamnt
atggacgtcgaaaccgccgttcgttctgctgttgatgccggcgcgttcattcgtccaact
ttcgaccagaaaatcttcaaggatcagtgcgcgtactgtttcaaagacccacacggaaaa
gatggtctctacattagtctgaagaactatcacgctttttgccgcgagcacgcagaaatc
tacggaacaacctctggaaacactctttttgtacaatttgagtccacaaagaaaataatt
gaagaaagaaccgatggggagccaacgagcaagatgaccaagctcacaatcgattcagat
ccaaagtttgaatttgaggacaaatactgtgttgttgttcacccagaatactcgcagcag
gtgaaaaatgtgcagaatcttccggaaattgctgaagcaattgcacaaattgccaacacg
acaagtgccgaacgcctgtcacttctctcatcaaccagtaatgcgtgggatgccgagatc
aagcttatcactaagcatcaaaatctcgagcaacaagacaacggaaagcacctcgctctt
actggatggacttgtgaagttgagggatgcggacttaatgataatctgtggctcaatttg
accgatggagctgtacggtgtgggcggagccaatttttgtccgatgggaagaagacgaat
ggaaatggacatatgcaagattatttcgattctacgagattcccacttgtggtaaagctc
gggacaatctcctcaaaccttgaattgattgatgtctacagttatgatgaagacgatgca
gttattgatccaaatttggagaagcatctgaaacatttcggacttgacccaacaaaaatg
gagaaaactgcgaaaagtacgatggagatggaattggatatgaatgagaagtgggaatgg
tcaaaatgcacagaggatggtcttttattggaaccaatatttggaccaggatatacggga
cttgtgaatactggaagcagttgttatatgaattcagttcttcaagctcttgtcacagtc
gactcattccaaactcgttacggtgagcagggtctcgagacgcttgtcaactgtccactt
gacaaacttcacaatgatttcaacgctcaattttcaaaagttgtccgcgcgatgctcagt
ggtgactattcatccgaaatggatccgactaataatcacatcaaaccgcttcaattcaaa
cgagttgctgctggaaatcatcgagatttctccacttcgaagcaacaagatgttgaggaa
tatattcgtttcctcttcgagaaaatcgccgaaaactcgagaaccgaagtgattgaccca
accgattcgttcaaattcaaagcaatcaatcgcttcgaggatagaggaactcgtagagtc
agatacactgatcaggaggaaatgctcattcgtcttccaatttctggggttaaggatctt
ctacgcccgattccggacactgaaaatcgttattcggtcgacatgaaagctgcaattcat
gcatattttgatgttcaaaagattgatgactatatatcaccaatcactggagaaccaaaa
ggagccaccaacactatttctatgaagactttccccgattatttgttcttccaagtttcg
aaattcgcttacaacgtcgacggaactcaaaagaaacttgacatggagctggaaatcgaa
gaggaattggatctcagtggatatcgaggacatggaaagttggaacatgagattgctctt
ccagatgaggaaccaactgctccacgaacaactccagatattccagcaagtgttcgtttt
gttgctggagagcttatgttgatgggattctgtgagaatgcgtgctacagagcagcttat
tattccaatggaaatgtggagattgcatcaaactggctcatggagcatatggacgactct
gatatcaatgatttgtttgtgattccatctggaactccatcagctcgtggagaagtcgat
ccgaatcttgtcgcgtcgattgttgaaatgggattctctaatcatcaagcaaagtatgct
ttgaagcaggtgccgactgttgcagaggctgttgaatggctttttgccaatatggatagt
atcccagtagagtcagccgccgtcggtctaagctcggatgctccagagccgtctgtcaca
gaatcggcaactcaaaagacattcaaggatggtggagagaaatataagttgattgggatg
atttctcatatgggatcacgtcctgattctggtcattacgtagctcacatgctcaaagag
ggaaaatgggttctcttcaatgacgaaaaagttgcactctcccaggatccaccaaaaaag
ttggcctatgtctacctgtacaagcgaatcgcctaa

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