Caenorhabditis elegans (nematode): CELE_Y39A1B.2
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Entry
CELE_Y39A1B.2 CDS
T00019
Symbol
ptr-19
Name
(RefSeq) SSD domain-containing protein
Organism
cel
Caenorhabditis elegans (nematode)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
ACR_tran
DUF4834
Motif
Other DBs
NCBI-GeneID:
191751
NCBI-ProteinID:
NP_001255085
WormBase:
WBGene00004233
Ensembl:
WBGene00004233
UniProt:
Q9XXR9
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All DBs
Position
III:<10781853..>10791176
Genome browser
AA seq
1003 aa
AA seq
DB search
MRFDCIEKRFAHAFGAYSGVVVRHPFPFFIIPILITAGLSTGLLRHEQAFMKDELELYTP
TDAQARKELSQLDHLFHINDSDPFYATRRYDIRRAGYIIVTNQEEDGDILNPLVMHSAMQ
LWSIVQSLTVEDEDDRRINYPSICVKFPIPPEFSKALHSLFAPNMTTPEEICVSNPLVEI
FKLLLVSDRSFLNRSIDEMTLSQISDAIQFDSGGMTHLLGGVTLDDDKRIAGAKAMLLPY
ALRHSSDDEDWVAEKWEVRLADFLLQYDSPIIRASWWTYETLAAESARDRLQLIHMLLPC
FVCVSIFTIACCCVFSWRRSRPWLAIGGVISAAMAIASAVGILLLAGYGMTSVAYSMPFI
VFSVGVDNVFILLSAWRSTSSTETLEHRMKETFADAAVSITVTSLTDLISFGVGCATPFP
SVQMFCAYAVAAVIFTYIYQLTFFAAVMVYTNRREINNRHCIFFHKLKKDTLPEKIAAQG
DRSFEKNTILAQFFRTTYSDFLLNPLVRIVILVTFCVYLGVASYGCTKVKLGLEPNDLLP
ENSYGKRTLMMAEKYFSDYGSSLHVWMYNLSEVDVAPRKIWNVLEKEVELYEHTEFTASS
DSWLRTFLAFVKQAGLLITPENFVYILKNVFLSQPQFAKYNRDVVLTEDGEHLEASRIPV
QLRHVGSANQSRAMRLFRRLAETSELQTGVYADFFQFAEQYNAVLPGTLSSIAYAGVAVV
AVSLILIPEPVASLWVSFSIVSINIGILGFMTFWSVRLDFISMVTIVMSIGFCVDFAAHL
AYNFAKGQNMDGSERMRNALYAVGAPILMSATSTIIGVSFMASAESYVFRSFLKTIMLVI
LLGALHGLVILPVLLSMFYCGGSSKKAKEHIDAVDQKLQAQYNNPARTASIQFLSNPDLY
TMPPPPSVEYSLSTLEFNRTQSRPLGAPPALTGSPKRELSGLSGPPEYEEHDPTGLSTFG
VSPAVVANTTGMIPMRAKLKYPSSMTQRRDSESRSTPELYYPS
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttgactgtatcgaaaaacgatttgctcacgcatttggagcatattctggtgtc
gttgtacggcatccgttcccattttttataattcccatactgatcactgctggcttatcg
actggacttttaagacatgaacaagcatttatgaaagatgaacttgagctgtatacaccg
acagatgctcaagctagaaaggaattaagccaacttgatcacttgtttcatattaatgat
tctgatccgttttacgcgacgagaagatacgacattcgaagagccggttatataatagtg
acgaatcaagaagaagatggtgatattttgaatcctttggttatgcattcagctatgcaa
ctttggagtattgtacagtctctgaccgtagaagacgaggacgatcgtcgcatcaactac
ccatcaatctgcgtgaaatttccaattcctccagaattcagcaaggctctgcattccctg
ttcgcgccaaatatgaccacacccgaagaaatatgtgtctcaaatccactcgttgagatt
ttcaagctgcttctcgtctcggatcgatcgtttttgaatcgatcaattgacgaaatgact
ctatcccaaatctccgatgcaattcaattcgatagtggaggaatgactcatttattagga
ggtgtcactttagatgatgataagagaattgctggtgcaaaagcgatgcttcttccctat
gcacttcgtcactcatctgacgatgaagattgggtagccgagaaatgggaagttcgtctc
gccgactttttgttgcagtacgactccccaataattcgagcaagttggtggacctatgag
acattggccgccgaatcagcaagagatcgtctacagcttatacatatgcttctgccatgt
tttgtgtgtgtatccatctttacaatagcatgttgctgtgtattctcatggcgtcgttct
cgtccttggctagcaatcggtggagtcatttcggcggcaatggcaattgcgtcagcagtc
ggaatactattactggctggttatggaatgactagtgtcgcctattcgatgcctttcatt
gtgttttctgtcggtgtcgataacgtgttcattcttctatcggcatggagatccacatca
tcaacggaaacattggaacatcgaatgaaagaaacatttgctgatgcagcagttagtatt
acagtaacctcattaactgatttaatatcattcggtgtcggttgtgcaaccccatttcca
agtgttcaaatgttttgtgcatatgctgttgcagctgttatcttcacttatatctatcaa
ttgacattttttgctgctgtaatggtttacacgaatcgacgagaaatcaataatcgacat
tgcatcttttttcataaattgaaaaaagatacacttcccgagaaaattgccgctcaagga
gatcgaagtttcgagaagaatacgattttggcgcagttttttagaacgacatattccgat
tttctgttgaatccgttggttcggattgtgattttggtcacgttttgtgtgtatttagga
gtagcttcttacggttgcacaaaagtgaaactaggcctcgagccgaatgacttgctccca
gagaattcatatggtaaacggaccctcatgatggcagaaaagtacttttcggattacggt
agctccctccacgtttggatgtataacctgtcagaagtcgacgtagcacctcgaaagatc
tggaatgttctggagaaagaagtggagctctatgagcacacagaattcacggcgagcagc
gactcatggctccgcacttttttggcttttgtgaagcaagcggggcttttgataactcct
gagaactttgtgtatatcttgaaaaatgtatttctatcacaaccacaatttgcgaaatat
aatcgagacgttgttctgacggaagatggtgagcatctggaagcttcgagaattccagtc
cagctccgtcatgtgggctccgcaaaccagtcgagagcgatgaggttgtttagaagattg
gcagagactagtgaattgcagactggagtttatgctgatttttttcagttcgctgaacaa
tacaatgcagttcttccgggtaccctttcctcgatcgcatatgcaggtgtcgctgttgtt
gcagtttcccttatcctcattccagaacctgtcgcctctctatgggtatccttctcgata
gtgtctattaatatcggaattctcggattcatgacgttctggtcggttcgactggatttt
atttcaatggttactattgttatgtcaattggattttgtgtcgattttgcggcccatttg
gcatataattttgcgaagggtcaaaacatggatggctcggaaagaatgagaaatgctctt
tacgctgtcggtgctccaatcctcatgtcggccacctcaacaatcatcggagtgtcgttt
atggcatcagccgagtcttacgttttccgaagtttcctgaaaactattatgctcgttatt
ctactcggagctttacatggactcgtaattctgccggttttattatccatgttttattgt
ggaggatcgtcgaaaaaggcaaaggagcatattgatgctgtggaccaaaagctacaagcc
cagtacaacaacccagctcgaacagcttcaatacagttcctgagcaaccctgatctctac
acaatgccaccacctccaagcgttgaatactctctttcaacactggaattcaatcgaacc
cagtcgagacctctcggtgctccgccagcgctcaccggaagcccaaaacgagaattatcg
gggctctcggggccgcccgaatacgaggaacacgatccgacggggctcagcacattcggt
gtatcgcctgcagttgtcgcgaacactacgggaatgataccgatgcgtgccaagttgaaa
tatccgagcagcatgacacagcgacgggatagtgagagtagaagtactcctgagctttat
tatccctcttaa
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integrated database retrieval system
