Caenorhabditis elegans (nematode): CELE_E01B7.1
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Entry
CELE_E01B7.1 CDS
T00019
Symbol
usp-50
Name
(RefSeq) USP domain-containing protein
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04137
Mitophagy - animal
cel04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
CELE_E01B7.1 (usp-50)
04137 Mitophagy - animal
CELE_E01B7.1 (usp-50)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cel01002
]
CELE_E01B7.1 (usp-50)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cel04131
]
CELE_E01B7.1 (usp-50)
04121 Ubiquitin system [BR:
cel04121
]
CELE_E01B7.1 (usp-50)
Enzymes [BR:
cel01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
CELE_E01B7.1 (usp-50)
Peptidases and inhibitors [BR:
cel01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
CELE_E01B7.1 (usp-50)
Membrane trafficking [BR:
cel04131
]
Endosome - Lysosome transport
Others
Others
CELE_E01B7.1 (usp-50)
Ubiquitin system [BR:
cel04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
CELE_E01B7.1 (usp-50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
USP8_dimer
DpnII
Motif
Other DBs
NCBI-GeneID:
180175
NCBI-ProteinID:
NP_507513
WormBase:
WBGene00008441
Ensembl:
WBGene00008441
UniProt:
G5EBW2
LinkDB
All DBs
Position
V:17924985..17934218
Genome browser
AA seq
811 aa
AA seq
DB search
MNSSGLQFTSMTELLATCSLTEQQTRQFEQKSLDVVYQSLKNLQGSAEKARGDLEQQYRL
LMKAGELGNIITKSSKFARWKQNTANAALFYADFEKVVREASNLQSVLNIKYENLVRRAD
TQKRAEQEAADKRAATITVDSTMRAVRAKITPRELVRKVENDTPKKSALIFDIRQNQSDA
IFYNRSEMITVIQVPYDMIDSSLTFASFRTNLAVTQRALLARLSTSDYVVLMDDDGPELV
NTSPLPKSKMSFLFKALTQYNQSERLRERPMFMEGGFKMWKAQYPTYTKNEQPVTPRSIP
SDELDDVISAYHRNYPMISEIRYPDLNTMRPEPTAQTPPAPAAPPAAPALNRQSTIPPVA
MTQRPMIPPSLPSSTPPAPLKPVAPPTPPIFPLLDRTSKPSTLPERPIDPSPTRQNGGGE
VKRPPLLDRATKPNAQNAQTSKQHEAQLLSIYDQMDMAIHRVVDDSTRNKGRGVPGAVGL
FNMGNTCFMSATLQCLFQTPGLAEVFTKKVFVSKVNTQSRLGSKGVISAGFASLSDMIWN
GTFTAIRPSRFLQLFSDTVYQPLSDGRQHDASEFQIFLLDALHEDTNQAQRISFEQNYHG
GAGIAKEAADFLKKHYQFSLSPVNRLLGSITVSEIRCLTCGASSATFEENTIISVEIPSN
SSCSLDMCLRSHFSQTKLDGDSRWNCPKCKEPRASTRTSKLWQPPPVMIIHLKRFALFNG
DFEKNTAAVTFETARFDVRPYLHEMAPAEKPVYKLYAATLHNGRLNSGHYTAVASHLRSD
KWLRFDDSVVTPCENFKVDPSLAYILFYKRC
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaactcatccggacttcaattcacaagtatgacggagcttcttgccacatgctcactt
acagagcagcaaacacgacaatttgagcaaaaatcgcttgatgtagtatatcaatctttg
aaaaatttgcaaggatctgctgaaaaagcccgtggagatttggagcaacaataccgatta
ttgatgaaagccggtgaactcggaaatattatcacgaaaagctcgaaatttgcgagatgg
aagcaaaatacagcaaatgcggcacttttctatgcggatttcgagaaagtcgttcgagaa
gcttcaaatttgcaatctgtgctgaatattaaatacgaaaatctggtccgacgtgctgac
acacaaaaacgtgccgaacaagaggctgcggataaacgtgcggcgacgattactgtagat
tcgacgatgcgggcggttcgggcaaagatcacaccgcgggaacttgtacgaaaagtggaa
aatgatacgccaaagaaaagcgcactgatttttgatattcgccaaaaccaatcggacgcg
attttctacaaccgaagcgagatgatcacagtgattcaggtgccatacgacatgatagac
agctccctaacattcgcttcgttccgcacgaatttggctgtaactcagcgagcactgctt
gctcggctctcaacgtctgattacgtagttctgatggatgatgatgggcctgaactcgtg
aacacgtcacctctgccgaaatccaaaatgtcgttccttttcaaggcgttgacgcagtac
aatcaatcggagcgtctacgcgaacggccaatgttcatggaaggtggattcaaaatgtgg
aaggctcaatatccgacgtacacgaagaatgagcagcccgtaacaccccgttcaatccca
tccgatgagcttgatgacgtcatttcggcctatcatcggaactatccgatgatctcggag
attcggtaccccgacttgaatacgatgcgtccagagccgacggctcagaccccacctgct
ccagcggctccaccagcggctccagcactcaatcggcagtcgacaataccgcccgtcgcg
atgactcaacgcccaatgattccgccttcattgccttcgagcacgcctcctgcaccttta
aaacctgtcgcaccgcccacgccgcccatcttcccgttgctggatcgaacatcaaagccc
tcgacacttccagaacgaccaatagatccatcgccgacacgtcagaatggaggtggagag
gtcaaacggccgccattgttggatagagcaactaagccgaatgctcagaatgctcagaca
tcaaaacagcatgaagctcagttgctctcgatctacgatcaaatggatatggcgattcac
cgtgtcgtcgacgattccacccgaaataagggtcgtggcgttccgggtgcagttgggctc
ttcaatatgggcaacacgtgcttcatgtctgccacgttgcagtgccttttccaaacgccg
ggactcgctgaagtgttcaccaagaaggttttcgtgtcaaaagtcaatacacagtcacgt
ctcggatcgaaaggtgtcatctctgctggttttgcgtcactttctgatatgatttggaat
ggaacgttcactgcgatcaggccttccaggtttttgcaactcttctcggataccgtctac
caaccactgagcgatggccggcaacacgatgcctctgaatttcagattttcttgttagac
gcgcttcacgaggacactaatcaggcacaacggatcagtttcgagcaaaactaccatggt
ggagccggaattgcaaaggaagcggcggattttctcaaaaaacactatcaattctcgtta
tcgccggttaatcggcttcttgggagcattaccgtgtcagaaatcagatgcctgacgtgc
ggagcttcttcggcgactttcgaggagaatacgataatttctgtggaaataccatccaat
tcgtcgtgctcactggatatgtgccttcgatcacacttttcgcaaactaaattggacgga
gattctcgttggaattgtccaaaatgcaaggagccacgtgcaagtacacggacatcaaaa
ctgtggcaaccaccaccggttatgatcatccatctgaagcgtttcgcgctgttcaacggg
gatttcgagaaaaacacggccgccgtgacatttgagaccgcccgattcgacgttcgaccg
tatttacatgagatggcgcctgccgagaagcccgtctacaagctttatgcggctacgctt
cacaacggtcgcctcaattcgggacactatacggctgtggcttcacatcttcgctctgac
aaatggcttcgtttcgatgattctgtcgtgacaccgtgtgaaaatttcaaagttgatcca
tcgctcgcctacattctcttctacaaacggtgctaa
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