Caenorhabditis elegans (nematode): CELE_F38B2.1
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Entry
CELE_F38B2.1 CDS
T00019
Symbol
ifa-1
Name
(RefSeq) Intermediate filament protein ifa-1
KO
K18585
intermediate filament protein if
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cel04812
]
CELE_F38B2.1 (ifa-1)
Cytoskeleton proteins [BR:
cel04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
CELE_F38B2.1 (ifa-1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
LTD
TPR_MLP1_2
Uso1_p115_C
Myosin_tail_1
CENP-F_leu_zip
CC149
APG6_N
CortBP2
GAS
DUF948
CENP-H
bZIP_1
Rx_N
KASH_CCD
PEARLI-4
Crescentin
Leu_zip
WD40_alt
ATG16
ATG17_like
FlaC_arch
SOGA
DUF1664
MAD
Prominin
Fez1
Occludin_ELL
Motif
Other DBs
NCBI-GeneID:
181316
NCBI-ProteinID:
NP_001257139
WormBase:
WBGene00002050
UniProt:
P90901
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All DBs
Position
X:<11271182..>11275498
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AA seq
592 aa
AA seq
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MMEITRESEFLHFNYLNYSDDFPGAMSFTSTTPSARAPLGGRTTGNVTSQDRMLKIVTEM
RSGAGSGLSPFGQNAASTIRDSREREKKEMSDLNDRLASYIEKVRFLEAQNRKLAADLDA
LRSKWGKDTHNIRNMYEGELVDAQKLIDETNKQRKDMEGQLKKMQDELAEMRRKLEDATK
GREQDRAKIDALLVTLSNLEAEISLLKRRIAQLEDEVKRIKQENQRLLSELQRARTDLDQ
ETLNRIDYQNQVQTLLEEIDFLRRVHDNEIKELQTLASRDTTPENREFFKNELSSAIRDI
REEYDQVNNVHRNDMESWYRLKVQEIQTQSARQNMEQGYAKEEVKRLRTQLSDLRGKLAD
LESRNSLLEKQIQELNYQLEDDQRSYEAALNDRDSQIRKMREECQALMVELQMLLDTKQT
LDAEIAIYRKMLEGEENRAGLKQLVEQVVKTHAITQETDTETMRVVKGETASRQSFQRSA
KGNVSIHEASPDGKFIVLQNTHRAKDEAIGEWKLKRRIDGKRENVYTLPRDFVLRAGKTL
KIFARNQGVASPPDQLVYDAEDSFGSGNNVQTILFNKEGEERATHIQRQSTA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgatggagattaccagagaaagtgagtttcttcattttaactacttaaattattccgat
gactttccaggagcgatgtctttcacttccacaacaccttcagctagagctccgctcgga
gggcgtacaaccggaaacgttacttcccaagatcgtatgctcaaaattgtgaccgagatg
cgctcaggtgctggatccggcttgtcgccatttggacaaaatgctgcatcaaccatccgt
gactctcgtgaacgtgagaagaaagaaatgagcgatttgaacgatcgacttgctagctac
atcgaaaaggtccgtttcctagaagcccagaatagaaaattggcagccgatcttgacgca
cttcgttccaaatggggaaaagacacgcacaacattcgtaatatgtatgagggagaactt
gtggatgctcaaaagctgattgatgaaaccaataagcaacgcaaggatatggaaggtcaa
ctcaagaagatgcaagatgaactcgctgagatgcgcagaaaattggaagatgccaccaag
ggccgtgaacaggatcgcgctaagatcgacgcacttctagtaaccctttctaatcttgaa
gctgaaattagccttctgaaacgtcgtattgctcagcttgaggatgaggtgaagcggatc
aagcaagagaatcagcgtttgctttctgagcttcaaagagcccgtaccgacttggatcaa
gaaaccctcaatcgtattgactaccaaaaccaagttcaaactcttcttgaggagattgat
ttcttgcgtcgtgtccatgacaatgagatcaaggagcttcaaactttggcttctcgtgat
actactccagaaaaccgcgagttcttcaagaacgaactctcctcggctattcgtgacatc
cgtgaggaatatgaccaagtcaacaacgttcaccgtaatgacatggaatcctggtatcgt
cttaaggtccaagagatccaaacgcagtctgccagacagaacatggaacaagggtatgcc
aaagaagaagtcaaaagactccgcacccaactcagcgatttgcgtggaaagctcgctgat
cttgaaagccgcaactctctcctcgagaaacaaattcaagagctcaactaccaattggaa
gatgatcagagatcttatgaagcagccctcaacgacagagattcccaaatccgcaaaatg
cgtgaggaatgccaagcccttatggtcgaattgcaaatgctcctggataccaaacaaact
ttggatgccgaaatcgccatctacagaaagatgctcgaaggagaagagaaccgtgctgga
ctcaagcaacttgtcgaacaggttgtcaagacccatgctatcacacaggaaaccgatacc
gagacgatgagagtcgtcaagggcgaaactgcatcccgtcaatcgttccagcgttctgca
aagggaaatgtttctatccacgaggcatcgccggatggaaagttcatcgtcctccagaac
acacatcgtgccaaggacgaggctatcggtgagtggaagttgaagagacgtatcgacgga
aaacgtgagaatgtctacacgcttccaagagactttgtccttcgtgccggaaagaccctc
aaaatcttcgcccgtaaccaaggagttgcctcaccaccagatcaattggtctatgatgct
gaagactcgttcggaagcggaaacaacgtccaaaccatcctcttcaacaaagaaggagag
gaacgtgctacccacatccaacgccagagcactgcctaa
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