KEGG   Caenorhabditis elegans (nematode): CELE_F57B9.3
Entry
CELE_F57B9.3      CDS       T00019                                 
Symbol
F57B9.3
Name
(RefSeq) RNA helicase
  KO
K03257  translation initiation factor 4A
Organism
cel  Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cel03019]
    CELE_F57B9.3 (F57B9.3)
   03012 Translation factors [BR:cel03012]
    CELE_F57B9.3 (F57B9.3)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cel04147]
    CELE_F57B9.3 (F57B9.3)
Messenger RNA biogenesis [BR:cel03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     CELE_F57B9.3 (F57B9.3)
   mRNA cycle factors
    Stress granule specific factors
     CELE_F57B9.3 (F57B9.3)
Translation factors [BR:cel03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    CELE_F57B9.3 (F57B9.3)
Exosome [BR:cel04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CELE_F57B9.3 (F57B9.3)
  Exosomal proteins of bladder cancer cells
   CELE_F57B9.3 (F57B9.3)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Flavi_DEAD AAA_30 SLFN-g3_helicase NACHT UvrD-helicase
Other DBs
NCBI-GeneID: 186440
NCBI-ProteinID: NP_498514
WormBase: WBGene00018997
Ensembl: WBGene00018997
UniProt: Q20935
LinkDB
Position
III:6939823..6941906
AA seq 394 aa
MTDTKVTISVVDSSSSSKEGNYDEVVESFDDMELKEELLRGIYGFGFEKPSAIQKSAVAP
CTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRGMAQRAHEQLKSLGR
NLNVNATCLGFDTTAENDKISHVLMGTPKDFLSNIPSDTSRIKMFVLDEADEMLSKGFKD
QIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRDPIRILVKKDELTLEGIRQFYINVQ
KDEWKFNCLCDLLKTSRETQALIFCNTRRRVTQLTEQLMSIPIKVSCFHGNMEHNEREDM
VKDFNSRNTRVLVTTDLMARGMNIRKSLIINYDVSGNMENYMLRNGRQGNFGSKGLPISF
FTENDISDLKKIENHYSTRIEEMPESFLEYLDEN
NT seq 1185 nt   +upstreamnt  +downstreamnt
atgacagatactaaggttacgatatcggtggtcgactcttcgagcagttcaaaagaggga
aactatgatgaagtcgtcgaatctttcgacgacatggagctcaaggaggagcttcttcgc
ggaatctacggattcggtttcgaaaagccatctgccatccaaaagagcgcagttgctcca
tgcacaactggtaaagatgtcactattcagtctcaagctgggagcgggaaaactgtaatt
tctctaattgatattcttcaaggaattgactgtgaagatgcacacttacaggtcattcta
ttggctcctcaaagggggatggctcaacgagcgcatgagcaattgaaatctctgggcaga
aatctgaatgtaaatgctacttgtttgggatttgatacaactgctgaaaacgacaaaata
agtcatgtcttgatgggaactcccaaagattttcttagcaatatcccttccgatacatcc
agaattaagatgttcgttcttgacgaggctgacgaaatgctttctaaaggtttcaaagat
cagatctacgaggttttccgttccatgccacaagacgttcaagtagtccttctttcggct
actatgccatctgaagttcttgatgtcactaatcgtttcatgcgtgatccaatccgtatt
cttgtcaagaaggacgagctcacccttgaaggtatcagacagttctacatcaacgttcaa
aaggatgaatggaagtttaattgcctttgtgatcttcttaagacatccagagaaacgcag
gctttaattttctgtaacactcggagaagggtcacccagctcaccgagcagttgatgtcc
ataccaataaaagtatcatgttttcatggaaatatggaacacaatgaacgcgaggatatg
gtaaaagatttcaattcgagaaatactcgtgtactcgtcaccactgatcttatggcacgt
ggtatgaatattcgtaaatcactcattatcaactacgatgtatctggaaatatggagaac
tacatgttacgaaatggaagacaaggaaattttggttcgaaaggacttcccatcagtttt
ttcacagaaaacgatattagtgatctcaagaaaattgaaaatcactattcgactcgaatc
gaagagatgccagaatcattccttgaatatctcgatgaaaactga

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