Caenorhabditis elegans (nematode): CELE_F43E2.2
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Entry
CELE_F43E2.2 CDS
T00019
Symbol
rpb-4
Name
(RefSeq) RNA polymerase Rpb4/RPC9 core domain-containing protein
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03020
RNA polymerase
cel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CELE_F43E2.2 (rpb-4)
09124 Replication and repair
03420 Nucleotide excision repair
CELE_F43E2.2 (rpb-4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cel03021
]
CELE_F43E2.2 (rpb-4)
03400 DNA repair and recombination proteins [BR:
cel03400
]
CELE_F43E2.2 (rpb-4)
Transcription machinery [BR:
cel03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
CELE_F43E2.2 (rpb-4)
DNA repair and recombination proteins [BR:
cel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CELE_F43E2.2 (rpb-4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
DUF6377
TetR_C_36
Motif
Other DBs
NCBI-GeneID:
174208
NCBI-ProteinID:
NP_001370397
WormBase:
WBGene00018391
Ensembl:
WBGene00018391
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All DBs
Position
II:7374495..7375237
Genome browser
AA seq
144 aa
AA seq
DB search
MSSGGGNQKSDGQVEEDAAECKFPKEFETTTCDALLTAEVYLLLEHRRQSSESKDEIEEM
SEVFIKTLNYARRMSRFKNRETIRAVRAIFSEKHLHKFEVAQIANLCPENAEEAKALVPS
LENKIEESELEEVLKDLQSKRTFQ
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccggtggaggaaatcaaaagtcagatggacaagtcgaggaagatgccgctgaa
tgcaaatttccgaaagaattcgaaacaacaacatgcgacgctcttctgaccgctgaggtt
tacttgcttctggagcatcgtcgtcaatcgagtgaaagcaaagacgaaattgaagagatg
agcgaggtcttcatcaaaactctcaactacgctcgccgcatgtctcgattcaaaaatcgc
gaaactatccgtgcagttcgagcgattttctccgagaagcatcttcacaaattcgaagtt
gcgcagattgccaatctctgccctgaaaatgccgaagaagccaaagcactagttccttct
ttggaaaacaaaatcgaggagtctgaactagaggaagttctcaaggatctgcaatccaaa
agaacattccaataa
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integrated database retrieval system