Dictyostelium discoideum (cellular slime mold): DDB_G0282739
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Entry
DDB_G0282739 CDS
T00245
Symbol
rpb4
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03020
RNA polymerase
ddi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DDB_G0282739 (rpb4)
09124 Replication and repair
03420 Nucleotide excision repair
DDB_G0282739 (rpb4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddi03021
]
DDB_G0282739 (rpb4)
03400 DNA repair and recombination proteins [BR:
ddi03400
]
DDB_G0282739 (rpb4)
Transcription machinery [BR:
ddi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
DDB_G0282739 (rpb4)
DNA repair and recombination proteins [BR:
ddi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
DDB_G0282739 (rpb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
DUF3007
AMPKBI
Motif
Other DBs
NCBI-GeneID:
8623774
NCBI-ProteinID:
XP_640235
dictyBase:
DDB_G0282739
UniProt:
Q54S04
LinkDB
All DBs
Position
3:complement(6226742..6227440)
Genome browser
AA seq
155 aa
AA seq
DB search
MTDPLIKRSGIQEEEDLTTLKFPRDLKDAKFLLNSEVAILLEHRKGISESEGTEFPQNTL
LIHLYYNSINDIIRTFHKTLAYAEKFSRYKNKTSIKQVRTALSKQNLEEFEIASLANLCP
EISDEAKSLIPSLKKMEDDELQAILDELSNLRKFN
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccattaataaaaagatcaggaattcaagaagaagaagatttaacaacatta
aaattcccaagagatttaaaagatgcaaaattcttattaaattcagaagttgcaatttta
ttagaacatagaaaaggaatttctgaatcagaaggtacagagtttccacaaaatacacta
ttaatacatttgtattataattcaattaatgatatcattagaacatttcataaaacatta
gcatatgcagagaaatttagtagatataagaataaaacatcaattaaacaggttagaaca
gcattatcaaaacaaaatttagaagaatttgagattgcaagtttagcaaatctttgtcct
gaaatttctgatgaagctaaaagtttaattccaagtttaaaaaaaatggaagatgatgaa
cttcaagcaattttagatgaattatcaaatcttagaaagttcaattaa
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