Escherichia coli K-12 MG1655: b1440
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Entry
b1440 CDS
T00007
Symbol
ydcS
Name
(RefSeq) putative ABC transporter periplasmic binding protein/polyhydroxybutyrate synthase
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
eco
Escherichia coli K-12 MG1655
Pathway
eco02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
eco00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
b1440 (ydcS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eco02000
]
b1440 (ydcS)
Transporters [BR:
eco02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
b1440 (ydcS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Phosphonate-bd
Glyco_hydro_62
Motif
Other DBs
NCBI-GeneID:
946005
NCBI-ProteinID:
NP_415957
Pasteur:
ydcS
RegulonDB:
ECK120003340
ECOCYC:
G6751
ASAP:
ABE-0004803
UniProt:
P76108
LinkDB
All DBs
Position
1511654..1512799
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AA seq
381 aa
AA seq
DB search
MSKTFARSSLCALSMTIMTAHAAEPPTNLDKPEGRLDIIAWPGYIERGQTDKQYDWVTQF
EKETGCAVNVKTAATSDEMVSLMTKGGYDLVTASGDASLRLIMGKRVQPINTALIPNWKT
LDPRVVKGDWFNVGGKVYGTPYQWGPNLLMYNTKTFPTPPDSWQVVFVEQNLPDGKSNKG
RVQAYDGPIYIADAALFVKATQPQLGISDPYQLTEEQYQAVLKVLRAQHSLIHRYWHDTT
VQMSDFKNEGVVASSAWPYQANALKAEGQPVATVFPKEGVTGWADTTMLHSEAKHPVCAY
KWMNWSLTPKVQGDVAAWFGSLPVVPEGCKASPLLGEKGCETNGFNYFDKIAFWKTPIAE
GGKFVPYSRWTQDYIAIMGGR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagacatttgcccgcagcagcctgtgtgcgctcagcatgacaataatgaccgct
cacgccgccgaaccgcctaccaatttagataaaccggaagggcgactggatattatcgcc
tggccgggatacatcgaacgcggacaaactgataaacaatacgactgggtaacgcagttc
gaaaaagagacaggctgcgcggtgaatgtgaaaaccgccgcgacttccgatgaaatggtc
agtctgatgaccaaagggggttacgatctggttacggcatccggcgatgcctcgctgcgt
ttgattatgggtaaacgcgtgcagccgattaataccgcattgattcccaactggaaaacg
ctcgatccgcgcgtggttaaaggcgactggtttaatgttggcggcaaagtttacggcaca
ccttaccaatgggggccgaacctgctgatgtacaacactaaaaccttcccgacgccgccg
gatagctggcaagtggtttttgttgagcaaaatctgccggacggcaagagcaataaaggc
cgcgttcaggcttatgatggccctatctatattgcggacgctgcgttgttcgttaaagcc
actcagccgcagttgggcatcagcgatccgtatcaactcaccgaagaacagtaccaggcg
gtgctgaaagtgctgcgcgctcaacacagtttgatccatcgctactggcatgacactacc
gtgcaaatgagcgatttcaaaaacgagggtgtggttgcttccagtgcctggccctatcag
gccaacgccctgaaagccgaaggccagcctgttgctaccgttttcccgaaggagggtgtt
accggttgggctgataccaccatgctgcatagcgaagcgaaacatccggtttgcgcctac
aaatggatgaactggtcattaacgccaaaagtgcagggcgatgtggcggcctggtttggc
tcgttaccggtagtgccggaagggtgtaaagccagtccgttattaggcgaaaaaggttgt
gaaaccaacggttttaactatttcgacaaaatcgccttctggaaaacgcctatagcagaa
gggggcaagtttgttccctacagtcgctggacgcaggattacattgccattatgggcggt
cgctaa
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