KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4328420
Entry
4328420           CDS       T01015                                 
Name
(RefSeq) tubulin beta-5 chain
  KO
K07375  tubulin beta
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04145  Phagosome
osa04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:osa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    4328420
  09142 Cell motility
   04814 Motor proteins
    4328420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:osa03036]
    4328420
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:osa04812]
    4328420
   04147 Exosome [BR:osa04147]
    4328420
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     4328420
Cytoskeleton proteins [BR:osa04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    4328420
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   4328420
  Exosomal proteins of colorectal cancer cells
   4328420
  Exosomal proteins of bladder cancer cells
   4328420
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 4328420
NCBI-ProteinID: XP_015625553
UniProt: P46265
Position
2:3619836..3622738
AA seq 447 aa
MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFV
PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPNG
LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA
EYQQYQDATADDEEEDYGDEEEDEVAA
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgagggagatcctgcacatccagggggggcaatgcgggaaccagatcggggccaagttc
tgggaggtgatctgcgacgagcacgggatcgaccacaccggcaagtactcgggcgactcc
gacctccagctcgagcggatcaacgtctactacaacgaggccagcggcggcaggttcgtt
ccgcgcgccgtgctcatggacctcgagccgggcaccatggactcggtgcgctccggtccc
ttcggccagatcttccgccccgacaacttcgtcttcggccagtccggcgccggcaacaac
tgggccaaggggcactacaccgagggcgccgagctcatcgactccgtcctcgacgtcgtc
cgcaaggaggccgagaactgcgactgcctccaaggatttcaagtctgccactctctagga
ggaggaactggttctggtatgggtaccctgctcatctcaaagatcagggaggagtacccg
gacaggatgatgttgacattctcagttttcccctcaccaaaggtttctgataccgtggtg
gaaccttacaatgccacactatctgtccatcagcttgttgagaatgccgatgagtgcatg
gtacttgacaatgaagctctatatgacatctgcttccgcactctgaagctcgccacaccc
acttttggtgatctgaaccatcttatttctgcaaccatgagtggtgttacatgctgcctg
cgcttcccgggacagctgaactctgacctccgcaagctggcggttaacttgatccccttc
cctcgtctccatttcttcatggtcggctttgcaccgctgacctcgaggggatcccagcag
taccgcgccctcactgtcccggagctgacccagcagatgtgggacgccaagaacatgatg
tgcgccgccgaccccaggcacggacgctacctcacggcgtcagccatgttccgcgggaag
atgagcaccaaggaggtggacgagcagatgctcaacgtccagaacaagaactcgtcctac
ttcgtggagtggatcccgaataacgtgaagtcgagcgtgtgcgacatccctcccaacggc
ctgaagatggcgtccaccttcatcggcaactcgacgtcgatccaggagatgttccgccgc
gtgagcgagcagttcacggccatgttcaggaggaaggccttcttgcactggtacaccggg
gaggggatggacgagatggagttcaccgaggccgagagcaacatgaacgacctggtggcc
gagtaccagcagtaccaggacgcgacagccgacgacgaggaagaggactacggcgacgag
gaggaagacgaggttgctgcctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (89)   
   KEGG ORTHOLOGY (1)   
   RefGene (84)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (24)   
   RefSeq(nuc) (2)   
   GenBank (11)   
   EMBL (11)   
Protein domain (5)   
   Pfam (5)   
All databases (129)   

Download RDF
DBGET integrated database retrieval system