KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4332742
Entry
4332742           CDS       T01015                                 
Name
(RefSeq) ribosome biogenesis protein bms1
  KO
K14569  ribosome biogenesis protein BMS1
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    4332742
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:osa03009]
    4332742
Ribosome biogenesis [BR:osa03009]
 Eukaryotic type
  90S particles
   GTPase
    4332742
SSDB
Motif
Pfam: RIBIOP_C AARP2CN GTP_EFTU AAA_16 AAA MMR_HSR1 AAA_22
Other DBs
NCBI-GeneID: 4332742
NCBI-ProteinID: XP_015632337
UniProt: Q0DS53 A0A0N7KH77
Position
3:12297052..12307635
AA seq 1180 aa
MAPADGGGEQPHKAHRQHKSGAKARKKKGKGKGGGGDDDGGERKNPKAFAFQSAAKAKRL
QARSAEIEQRRLHVPIMDRSIGEPPPFVVVVQGPPQVGKSLLIKCLVKHYTKQNLSEVRG
PITVVSGKSRRVQFLECPNDINGMIDAAKIADLALLLIDGSYGFEMDTFEFLNIMQVHGF
PKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWAEIKEGAKLFYLSGLIHGKYTKREVHNLA
RFISVIKPIPLSWRMAHPYLLVDRFEDVTPPESVRLNRKCDRKITLYGYLRGCNMKRGTK
VHITGAGDFSLSGVTSLADPCPLPSAAKKRGLRDKEKLFYAPMSGLGDLLYDTDAVYINI
NPHLVQFSKTGENDASKKQGKGQDVGVTLVKTLQNPRYSLNEKLDQSFINLFGRKPAAQS
EDISGNQNDQGDANILEEADGNNICNANTLESNDHSYSECSSDSEHDNDEATQQNDHEVG
LREEVEFCNGRMRRKAVSANFKDDDDDEGAEEDDVDSENSGDDQLSEGSADDSEESLDSD
DETENNSKWKESLLARTLSRRSANLMQLVYGQASKKLDEGNDSSAEESSDEEFFVPKGQK
KQAKNESTSFDDMDAEDYSKFFKTELRDWSDEDLIKSIRDRFVTGNWSKAALRGQEINEN
DVDDEEVDGDFEDLETGEVHTSKAYENTSGNGGTHKQDDLAMEERRLKKLALKAKFDAEY
DGSDLSGEEVDNDTKKSKREETNGGGYFDKLKEEIEIRKQMNISELNDLDEDTRVEIEGF
RTGSYIRLEVHGVPFELVEYFDPCHPILVGGIGLGEENTGYMQASLKRHRWHRKVLKTKD
PIIVSIGWRRFQTTPVYAIEDRNGRHRMLKYTPEHMHCFAMFWGPLAPPKSGVLAVQHLS
NSQVPFRITATGFVQEFNNTARIMKKIKLTGVPCKIFKKTALVKGMFTSDLEVARFEGAT
IRTVSGIRGQVKKAAKIEPGDMPRRKGESIDGIARCTFEDRILMSDIVFMRAWVNVEVPT
YCNLVTTALQPQDETWQGMRTTAELRRAHNIPIPHNTDSVYKPIERKVRKFNPIEIPAKL
QHLLPFKSKPKDTPKHRKTPVENRVPVLMQPSEKKTHAAIQQLRLLKHEKARKKKLQDEK
KKKAYEAEKAKSELLTKKRQREERRVRYREEDKQKKRARR
NT seq 3543 nt   +upstreamnt  +downstreamnt
atggcccccgcggacggcgggggagagcagccgcacaaggcgcaccggcagcacaagtcc
ggcgcgaaggcgaggaagaagaaggggaaggggaagggcggcggcggcgacgatgacggt
ggcgagaggaagaacccgaaggcttttgcctttcagtcagctgcaaaggccaagcgtcta
caagcacgatcggctgagattgaacaacgtcgtcttcatgtgccaattatggatcgctca
attggtgaaccaccaccttttgttgttgtagttcaagggcctcctcaggttgggaagtcg
ctgctgataaaatgtctagtaaagcactacacgaaacaaaatttgtctgaagtccgtggt
ccaatcactgttgtgtcaggtaaaagcaggcgcgtacagttcttggagtgtccaaatgat
atcaacggaatgattgatgctgctaaaatagctgatcttgctctgctgcttattgatgga
agctatggatttgaaatggatacatttgagttcctaaatattatgcaagtgcacggattc
cccaaggtgatgggagtccttacacatcttgataagtttaaagatgtaaaaaagcttagg
aaaaccaagcagcgcctgaagcatcgattttgggctgagataaaggagggagcaaaactt
ttctacttgtctggtctcattcatggaaagtacacgaaaagagaagtccataatcttgca
aggttcatctctgttatcaagcctatcccactgagttggaggatggcacatccttatctg
ctagtcgatagatttgaagatgtaactcctccagaaagtgtgcgcttgaacagaaagtgt
gacaggaaaataacattgtatggctaccttcgtggctgtaacatgaaaagagggacaaag
gtacatatcacaggggcaggtgattttagcttgtctggggtaacaagtttggcagatcct
tgcccattgccatcagctgcaaagaagagaggactacgtgacaaggaaaagctgttctac
gcgccaatgtctggccttggtgatctactgtatgacacagatgcagtttatataaacatc
aatcctcatcttgttcagttctcaaagactggtgagaatgatgcatctaaaaagcaaggg
aaaggacaggatgttggtgtaaccctagtaaaaacacttcagaaccccagatattccctt
aatgaaaagttggatcagagttttataaatttatttggtagaaagcctgctgctcagtcc
gaagacatctctggcaaccagaatgatcagggagatgctaatattttggaagaagcagat
ggtaataacatatgcaacgcaaacacattggagagcaatgatcattcttattctgagtgc
tccagcgatagtgaacatgataatgatgaagcaactcagcaaaatgaccatgaagttggc
ttgagagaagaggtggaattttgcaatggaaggatgaggagaaaagctgtatcagctaat
tttaaagatgatgacgatgatgagggtgcggaagaagatgacgttgacagtgaaaattct
ggtgatgaccagttatctgaaggttccgcagatgacagtgaagaatcacttgattcagat
gatgaaactgagaacaattcaaagtggaaagagtccttgcttgctagaacactgtccaga
cggagtgccaatctaatgcaacttgtatatggccaagcttcaaagaagctggatgaagga
aatgacagtagtgcagaagagagttcagatgaagaattttttgtaccaaaaggacaaaag
aagcaagcaaagaatgaatcaacaagctttgatgatatggatgctgaggattactccaag
ttttttaaaactgagctaagagattggtctgacgaagatctcatcaagagcattcgtgac
cgtttcgtgactggaaattggtcaaaagcagctctaagaggacaggaaataaatgaaaac
gatgtggatgacgaagaagtcgatggagattttgaagatctggagactggtgaggtgcat
acaagcaaggcatatgaaaatacttcaggaaatggaggtactcacaagcaagatgacctt
gctatggaagaaagaagactcaagaagctcgcacttaaggcaaaatttgatgcagaatat
gatggatctgatctctccggtgaggaagttgataatgacacaaagaaatcgaaacgagaa
gaaactaatggagggggctatttcgataagttaaaggaggaaattgaaattcgcaagcaa
atgaatatttccgaactcaatgatttagatgaagataccagggtagaaattgaagggttt
aggactggttcttacatcagattagaggtacatggtgtgccgtttgagctagttgaatat
tttgatccttgccatcccattctcgttggaggcattggccttggtgaggagaatactgga
tatatgcaggctagcctgaaacgacacaggtggcacaggaaagtactgaagacaaaagac
ccaattattgtctctattggttggaggcgtttccaaacaactcctgtatatgcaatagag
gatcgaaatggtcggcaccgcatgctcaaatatacacctgagcatatgcattgctttgct
atgttttggggaccgcttgctccaccaaaaagtggtgtactggcagtccagcatctctcc
aacagtcaggtaccatttagaattactgcaacaggctttgttcaagaattcaacaatact
gcccgaatcatgaagaaaatcaagctcacaggtgtaccgtgcaagatatttaagaaaact
gccctagtcaaaggcatgttcacatctgacttagaggttgctaggtttgagggtgcaact
attcggacagtaagtggaatccgagggcaagttaaaaaggcagcaaagattgaaccagga
gatatgccaaggagaaaaggggaaagtatagacgggattgcaaggtgcacatttgaagac
agaattcttatgagtgacattgtcttcatgcgtgcatgggtcaatgttgaagttcccacc
tactgtaaccttgtgacaactgctcttcaaccccaagatgagacttggcaaggcatgaga
actactgctgagctgcggagggcacataatattcctataccgcacaacacagattcagtt
tataagcccattgagcggaaagtgcggaagtttaatcctatagagatccctgcaaaactg
cagcatctacttccttttaaatctaaaccgaaggatacgcccaagcatagaaaaacacca
gtggagaacagggtccctgtccttatgcagcccagtgagaagaagacacatgcagccatt
caacagttaaggctgctaaaacatgagaaggcaaggaagaagaaattgcaggatgagaag
aagaagaaagcatatgaggcggagaaagcaaagtctgaacttctaacgaagaagcggcag
agagaggagaggcgtgtgaggtaccgagaggaagataagcaaaagaagcgagcccgcaga
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (48)   

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