KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4333540
Entry
4333540           CDS       T01015                                 
Name
(RefSeq) histone-binding protein MSI1 homolog
  KO
K10752  histone-binding protein RBBP4
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03082  ATP-dependent chromatin remodeling
osa03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    4333540
   03083 Polycomb repressive complex
    4333540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:osa03036]
    4333540
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     4333540
  Histone modification proteins
   HAT complexes
    HATB complex
     4333540
   HDAC complexes
    Sin3A-HDAC complex
     4333540
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     4333540
    PRC2.2
     4333540
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     4333540
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    4333540
  Chromatin remodeling factors
   NuRD complex
    4333540
   NuRF complex
    4333540
   NuRF complex (fruit fly)
    4333540
SSDB
Motif
Pfam: CAF1C_H4-bd WD40 ANAPC4_WD40 eIF2A MIOS_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 4333540
NCBI-ProteinID: XP_015632366
UniProt: Q10G81
Position
3:complement(24621276..24629514)
AA seq 428 aa
MPKATAAEEEEFRAEVEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLPDRAEP
AGKDHSVQKMVLGTHTSDNEPNYLMLAQVQLPLDDAEADARHYDDDHAEIGGFGAASGKV
QIVQQINHDGEVNRARYMPQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLKG
HNSEGYGLSWSIFKEGHLLSGSDDAQICLWDIKANSKNKTLDALQIFKYHDGVVEDVAWH
LRHEYLFGSVGDDHNLLIWDLRSPVSTKPVQSVAAHQGEVNCLAFNPFNEWVVATGSTDK
TVKLFDLRKIDTSLHTFDCHKEEVFQVGWSPKNETILASCCLGRRLMVWDLSRIDQEQTP
EDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIYHDEDDVP
TDDPAKAP
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgccgaaggctacggcggcggaggaggaggagttccgggcggaggtggaggagcggctg
atcaacgaggagtacaagatctggaagaagaacaccccgttcctgtacgacctcgtcatc
acccatgccctggagtggccgtccctcaccgtgcagtggctccccgaccgcgctgagccc
gctgggaaggaccactccgtccagaagatggtgctcggcacccacacctccgacaacgag
cccaactacctcatgctcgcccaggtccagctccccctcgacgacgccgaggccgacgcg
cgccactacgacgacgaccacgccgagatcgggggcttcggcgccgcctccggcaaggtg
caaatagttcaacagataaatcatgatggagaggttaatcgagctcggtatatgccccag
aattcatttataattgctaccaagacagtcagtgcagaagtatatgtctttgattatagc
aagcacccatcaaagcctccattggatggtgcatgcaatcctgacttacggctgaaggga
cataactctgaaggatatggactgtcttggagtatatttaaggagggccatttgttgagt
ggatctgatgatgctcaaatttgcttatgggacatcaaagcaaatagtaaaaacaaaacc
cttgacgctcttcagatttttaagtatcatgatggtgtcgttgaagatgttgcctggcat
ttgaggcatgaatacttgtttggctcagttggtgatgatcacaatttgctaatttgggat
ttacgttctcctgtgtctactaagcctgtacagtctgtggcggcacaccagggtgaggtg
aattgtctggctttcaaccccttcaatgaatgggttgttgcaactggttcaactgacaag
accgtgaaactatttgatcttcggaagattgatacttccctacacacctttgattgccac
aaggaggaagtatttcaagttggatggagcccaaagaatgagactatacttgcatcttgt
tgtcttggcagaaggttaatggtctgggatttaagcaggattgaccaggaacagacaccg
gaggatgcggaagatggtcctccggagctcctgttcattcatggaggccatacaagcaag
atctccgacttctcctggaacccgtgcgaggactgggtgattgctagcgtcgctgaggac
aacatccttcagatatggcaaatggcagagaacatctaccatgacgaggatgatgtgccg
actgatgacccggccaaggctccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (11)   
   RefSeq(nuc) (3)   
   GenBank (4)   
   EMBL (4)   
Protein domain (6)   
   Pfam (6)   
All databases (40)   

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