KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4326917
Entry
4326917           CDS       T01015                                 
Name
(RefSeq) tubulin beta-1 chain
  KO
K07375  tubulin beta
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04145  Phagosome
osa04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:osa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    4326917
  09142 Cell motility
   04814 Motor proteins
    4326917
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:osa03036]
    4326917
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:osa04812]
    4326917
   04147 Exosome [BR:osa04147]
    4326917
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     4326917
Cytoskeleton proteins [BR:osa04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    4326917
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   4326917
  Exosomal proteins of colorectal cancer cells
   4326917
  Exosomal proteins of bladder cancer cells
   4326917
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 Tubulin_2 Misat_Tub_SegII
Other DBs
NCBI-GeneID: 4326917
NCBI-ProteinID: XP_015620877
UniProt: Q43594
Position
1:complement(10099386..10103029)
AA seq 447 aa
MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV
PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG
LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATADEEGDYEDEEEQVPEDE
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgagggagatcctgcacatccagggcgggcagtgtggcaaccagatcggctccaagttc
tgggaggtggtctgcgacgagcacggcatcgaccccaccggccgctacgtcggcacctcc
gacctccagctcgagcgcgtcaacgtctactacaatgaggcctcctgcggccgcttcgtg
ccccgcgccgtgctcatggacctcgagccgggtaccatggacagcgtccgcaccggcccc
tatggccagatcttccgccccgacaacttcgtcttcggccagtccggcgccggcaacaac
tgggccaaggggcactacaccgagggcgcggagctcatcgactctgtgctcgatgtcgtc
aggaaggaggctgagaactgcgactgcctccaaggtttccaagtttgccattcccttgga
ggaggcactggatctggaatgggcacactcctgatctccaagatcagagaggagtaccct
gaccggatgatgctcacattttctgtcttcccttcaccaaaggtctcagacacagttgtt
gagccttacaatgcaactctctctgtccatcagttggtggagaatgctgatgagtgcatg
gttcttgacaatgaggcactttatgacatctgcttccgcaccctcaagctgaccactcct
agctttggcgacctgaaccacttgatcagtgctacaatgagtggagttacttgctgcctt
cgcttccctggtcaattgaactctgacctccgcaagctggccgtgaacttgatccctttc
cctcgcctgcacttcttcatggtgggctttgcgccactcacctcgcgtggctcgcagcag
tatcgcgccctcactgtccctgagctcacccagcaaatgtgggacgccaagaacatgatg
tgtgccgctgacccgcgccatggccgctacctcacggcctccgccatgttccgtggcaag
atgagcaccaaggaggtggacgagcagatgatcaacgtccagaacaagaactcgtcctac
ttcgtcgagtggatccccaacaacgtgaagtccagcgtgtgcgacatcccgccgcgcggc
ctctccatggcgtccaccttcatcggcaactccacctccatccaggagatgttccgccgc
gtgagcgagcagttcaccgccatgttcaggaggaaggccttcttgcattggtacaccggc
gagggcatggacgagatggagttcaccgaggccgagagcaacatgaacgaccttgtctcc
gagtaccagcagtaccaggatgccaccgccgacgaggagggcgactacgaggacgaagag
gagcaggtccccgaagacgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (16)   
   RefSeq(nuc) (2)   
   GenBank (7)   
   EMBL (7)   
Protein domain (5)   
   Pfam (5)   
All databases (60)   

Download RDF
DBGET integrated database retrieval system