KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4343694
Entry
4343694           CDS       T01015                                 
Name
(RefSeq) tubulin alpha-1 chain
  KO
K07374  tubulin alpha
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04145  Phagosome
osa04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:osa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    4343694
  09142 Cell motility
   04814 Motor proteins
    4343694
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4343694
   03036 Chromosome and associated proteins [BR:osa03036]
    4343694
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:osa04812]
    4343694
   04147 Exosome [BR:osa04147]
    4343694
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     4343694
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     4343694
Cytoskeleton proteins [BR:osa04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    4343694
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   4343694
  Exosomal proteins of other body fluids (saliva and urine)
   4343694
  Exosomal proteins of colorectal cancer cells
   4343694
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 4343694
NCBI-ProteinID: XP_015647082
UniProt: P28752 Q0PVB0 A0A8J8XPU3
Position
7:23243797..23247220
AA seq 450 aa
MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK
HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT
SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP
SVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGADDENDDGEDY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgagagagatcatcagcatccacatcggccaggccgggatccaggtcggcaacgcgtgc
tgggagctctactgcctcgagcacggcatcgagcccgatggcaccatgcccagtgataca
acggttggcgtcgcacacgatgcgttcaacactttcttcagcgagacgggcgctggcaag
catgtgcccagggccatctttgtcgacctggagcccactgtcatcgacgaggtgcgcact
gggtcgtaccgtcagctcttccaccctgagcagctcatctctgggaaggaggatgccgct
aacaactttgcccgtggccattacactgttggaaaggagatcgtagatctatgcctggac
cgtgtgcgcaagttggcagacaactgcactgggctgcagggattcttggtgttcaatgct
gttggtggtggaactggatcaggacttggttctcttctgttggagcgtctctctgttgat
tatggaaagaagtccaagcttggcttcacaatttacccttccccccaggtctcaacagct
gttgtagaaccatacaacagtgtcctctccacccactccttgcttgagcacactgatgtg
gcagttctcctagacaatgaggctatctatgacatatgccggagatcccttgacatcgag
aggccaacctacaccaacttgaacaggctcatctcacagatcatatcttcactcaccacc
tctctgaggtttgatggcgctatcaatgtggatgtcactgagttccagaccaaccttgtc
ccataccctcgcatccatttcatgctttcatcctatgcccctgttatctctgctgagaag
gcttaccatgagcagctttctgtgcctgaaatcaccaatgctgtttttgagccctcaagc
atgatggctaagtgtgaccctaggcacgggaaatacatggcttgctgcttgatgtaccgt
ggtgatgttgttcccaaggacgtcaatgccgcagttgcaaccatcaagacgaagagaact
gtccagtttgttgactggtgccctactggattcaagtgtggcatcaactaccagccaccc
tctgttgtccctggtggtgacctggctaaggttcagcgtgcagtgtgcatgatcagcaac
aacactgctgttgctgaggttttctcgcgcatcgaccacaagttcgacttgatgtatgct
aagcgtgcgtttgtgcactggtacgttggtgagggaatggaagaaggtgaattctcagaa
gcccgtgaggacttggctgcccttgagaaggactatgaggaagtcggcgccgagggtgca
gacgacgagaacgacgatggagaagactattag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (479)   
   KEGG ORTHOLOGY (1)   
   RefGene (474)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (6)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (24)   
   RefSeq(nuc) (2)   
   GenBank (11)   
   EMBL (11)   
Protein domain (3)   
   Pfam (3)   
All databases (520)   

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