KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4347727
Entry
4347727           CDS       T01015                                 
Name
(RefSeq) histone-binding protein MSI1 homolog isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03082  ATP-dependent chromatin remodeling
osa03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    4347727
   03083 Polycomb repressive complex
    4347727
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:osa03036]
    4347727
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     4347727
  Histone modification proteins
   HAT complexes
    HATB complex
     4347727
   HDAC complexes
    Sin3A-HDAC complex
     4347727
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     4347727
    PRC2.2
     4347727
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     4347727
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    4347727
  Chromatin remodeling factors
   NuRD complex
    4347727
   NuRF complex
    4347727
   NuRF complex (fruit fly)
    4347727
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd
Other DBs
NCBI-GeneID: 4347727
NCBI-ProteinID: XP_015612432
UniProt: Q0IZZ1 Q651E0
Position
9:21276412..21280620
AA seq 410 aa
MDGGSSTAARSSAAEMEEHQNWKKNAPVLYDLVISQPLEWPSLTVQWLPSHSRSPGSARS
HRLVLGTHTSDETPNHLLLADAALPLPPRLAAAAAAAGGAVPAPSVSISRSVPHKGEVNR
ARCMPQRPYTVATKTCVDEVHVYHLGDGGEKGGADVVLRGHEAEGYGLAWSPMKEGLLLS
GSYDKKICLWDLAAGSGASSLDAHHVFEAHDDVVEDVAWHLKDENLFGSAGDDCKLMMWD
LRTNKPGQSIVAHQKEVNSLSFNPFNEWILASASGDATIKLFDLRKLSRSLHVFDSHDSC
RGEVFQVEWNPNLETVLASSAADKRVMIWDVSRIGDEQAEEDANDGPPELLFVHGGHTAK
ISELSWNPTQKWVMASVAEDNILQIWEMAESIYCDDNYLHDNDDDSCPAT
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggacggcgggtcctccacggcggcgaggtcgtcggcggcggagatggaggagcaccag
aactggaagaagaacgcgccggtgctctacgacctcgtcatctcccagccgctcgagtgg
ccgtcgctcaccgtccagtggctcccctcccactcccggtcgccgggctccgcccgctcc
caccgcctcgtcctcggcacccacacctccgacgagacgcccaaccacctcctactcgcc
gacgccgccctcccgctcccgccccgcctggcggcggcggccgcggcggcgggcggtgcc
gtcccggccccgtccgtgtccatctcccgctcggtgccgcacaagggcgaggtcaaccgc
gcccgctgcatgccgcagaggccgtacacggtggctaccaagacctgcgtggatgaggtg
cacgtgtaccatcttggcgacggcggcgagaagggcggcgccgatgtggtgctcaggggg
catgaagcggaggggtatgggctggcgtggagtccgatgaaggaggggttgctgctgagc
ggctcgtatgataagaagatttgcctttgggatctcgctgctgggagtggagcttcgtct
ctggatgcacatcatgtgttcgaggctcatgacgatgttgttgaagatgttgcatggcac
ctgaaagatgaaaacctatttggatctgctggggatgactgcaagctgatgatgtgggac
ttgcgtactaataaaccaggacaatctatagtagcacaccaaaaagaagtaaactctttg
tccttcaatccgtttaatgagtggatcttggcttcagcatctggagatgcaactattaag
ctatttgacttgcgaaaactgtcaagaagcctgcatgtattcgacagccatgactcctgt
aggggagaggtttttcaggttgagtggaatcctaatttggagactgtgttagcatcctca
gctgcagacaaaagggtgatgatatgggatgttagcaggatcggagacgagcaggcagag
gaggatgcaaacgatggtccaccggagctgctgttcgtgcatggaggccacacagccaag
atatcagagttgtcgtggaaccccacccagaaatgggtcatggccagcgtggccgaggat
aacatcctgcagatctgggagatggcagaaagcatatactgtgatgacaattatctccat
gacaatgatgatgactcgtgcccagccacataa

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