KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4333966
Entry
4333966           CDS       T01015                                 
Name
(RefSeq) tubulin alpha-1 chain
  KO
K07374  tubulin alpha
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04145  Phagosome
osa04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:osa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    4333966
  09142 Cell motility
   04814 Motor proteins
    4333966
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4333966
   03036 Chromosome and associated proteins [BR:osa03036]
    4333966
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:osa04812]
    4333966
   04147 Exosome [BR:osa04147]
    4333966
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     4333966
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     4333966
Cytoskeleton proteins [BR:osa04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    4333966
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   4333966
  Exosomal proteins of other body fluids (saliva and urine)
   4333966
  Exosomal proteins of colorectal cancer cells
   4333966
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 4333966
NCBI-ProteinID: XP_015630335
UniProt: Q75GI3 Q6AU01
Position
3:29526097..29528991
AA seq 451 aa
MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA
SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
SVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAESDENEDGDDGDEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagggagtgcatctcgatccacatcggccaggccggtatccaggtcgggaacgcgtgc
tgggagctctactgcctcgagcatggcatccaggctgatggtcagatgcccagtgacagg
actgttggtggaggtgatgatgctttcaacaccttcttcagtgagactggtgctgggaag
catgttccccgtgctgtatttgttgatcttgagcctactgtgattgatgaggtgaggact
ggttgctaccgccagctcttccaccctgagcagctcatcaatggcaaggaggatgcagct
aacaactttgcccgtggtcactacaccattggcaaggagattgttgatctgtgccttgac
cgcatcaggaagcttgctgacaactgcactggtctccaaggtttccttgtgttcaacgct
gttggaggtggaacgggctctggtcttggttcccttctcctggagcgcctttctgtggac
tatggcaagaagtccaagcttgggttcactgtgtacccatcccctcaggtctccacctct
gtggttgagccatacaacagtgtcctctctacccactccctccttgagcacactgatgtt
gctgttctgcttgataatgaggccatctatgacatctgccgccgctcccttgacattgag
cgcccaacctacaccaacctcaacaggcttgtgtctcaggttatctcatccctgaccgcc
tccctgaggtttgatggtgctctgaacgtggatgtcaatgagttccagaccaaccttgtg
ccctacccaaggatccacttcatgctttcgtcctacgctccagtgatctctgcggagaag
gcctaccatgagcaactctctgttgccgagatcaccaacagtgccttcgagccatcctcc
atgatggccaagtgcgaccctcgccacggcaagtacatggcctgctgcctcatgtaccgc
ggcgatgtcgtgcccaaggacgtgaacgccgccgtcgccaccatcaagaccaagcgcacc
atccagttcgtggactggtgcccgacggggttcaagtgcggcatcaactaccagccgccc
agcgtcgtccccagcggcgacctcgccaaggtgcagagggccgtgtgcatgatctccaac
tccaccagcgtcgtggaggtgttctcccgcatcgaccacaagttcgacctcatgtactcc
aagcgcgccttcgtccactggtacgtgggtgagggcatggaggagggtgagttctctgag
gcccgtgaggatctcgccgcgttggagaaggactacgaggaggttggcgctgagtccgac
gagaatgaggatggcgatgatggtgacgagtactag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (542)   
   KEGG ORTHOLOGY (1)   
   RefGene (537)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (19)   
   RefSeq(nuc) (1)   
   GenBank (9)   
   EMBL (9)   
Protein domain (3)   
   Pfam (3)   
All databases (575)   

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