KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4341810
Entry
4341810           CDS       T01015                                 
Name
(RefSeq) tubulin beta-3 chain
  KO
K07375  tubulin beta
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04145  Phagosome
osa04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:osa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    4341810
  09142 Cell motility
   04814 Motor proteins
    4341810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:osa03036]
    4341810
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:osa04812]
    4341810
   04147 Exosome [BR:osa04147]
    4341810
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     4341810
Cytoskeleton proteins [BR:osa04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    4341810
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   4341810
  Exosomal proteins of colorectal cancer cells
   4341810
  Exosomal proteins of bladder cancer cells
   4341810
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 4341810
NCBI-ProteinID: XP_015643315
UniProt: Q40665
Position
6:complement(27877636..27880143)
AA seq 446 aa
MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV
PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIG
LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA
EYQQYQDATAEEEDYEEEEEDEEVAA
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgagggagatcctgcacatccaggggggccaatgcgggaaccagatcggggccaagttc
tgggaggtgatctgcgacgagcacgggatcgaccacaccggcaagtactccggcgactcc
gacctccagctcgagcggatcaacgtctactacaacgaggccagcggcggccgctacgtg
ccccgcgccgtgctcatggacctcgagcccggcaccatggactccgtccgctccggcccc
tatggccagatcttccgccccgacaacttcgtcttcggccagtccggcgccggcaacaac
tgggccaagggccactacaccgagggcgccgagctcatcgactccgtcctcgacgtcgtc
cgcaaggaggccgagaactgcgactgcctccaagggttccaggtttgccactcgctggga
ggaggaactggctccgggatgggaaccctgctcatctccaagatcagggaggagtaccct
gaccggatgatgctcacgttctcggtcttcccatcgcccaaggtgtccgacactgtcgtc
gagccctacaatgctaccctctctgtgcaccagcttgttgagaatgcggatgagtgcatg
gttcttgacaatgaggctctctacgacatctgcttccgcacgctcaagctcgcgacacct
actttcggtgatctcaaccatcttatctctgcaacaatgagtggtgttacctgctgcctc
cgcttccctggccagttgaactctgacctccggaagcttgctgtcaacctgatccctttc
ccgcggctccacttcttcatggttggattcgctcctctgacttccaggggatcccagcag
taccgtgccctcactgtaccagagctgacccagcagatgtgggatgcaaagaacatgatg
tgtgctgctgacccccgccatgggcgctacctcacagcctcagccatgttccgcggaaag
atgagcaccaaggaagttgatgagcagatgctgaatgtccagaacaagaactcgtcatac
tttgtggagtggatccctaacaatgtcaagtcgagtgtgtgtgacattccacccattggc
ctgaagatggcatccacattcatcggcaactcgacctcaatccaggagatgttccgccgt
gtcagtgagcagttcaccgccatgttcaggaggaaggctttcttgcactggtacactggt
gagggaatggacgagatggagttcaccgaggctgagagcaacatgaacgacctggtagct
gaataccagcagtaccaggatgccaccgctgaggaagaggactatgaggaggaagaggag
gacgaggaggttgctgcctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (88)   
   KEGG ORTHOLOGY (1)   
   RefGene (83)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (14)   
   RefSeq(nuc) (2)   
   GenBank (6)   
   EMBL (6)   
Protein domain (5)   
   Pfam (5)   
All databases (118)   

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