Detailed view for PF3D7_0702300

Basic information

TDR Targets ID: 806
Plasmodium falciparum, sporozoite threonine and asparagine-rich protein

Source Database / ID:  PlasmoDB   |   GeneDB   |   MPMP

pI: 4.9066 | Length (AA): 594 | MW (Da): 66004 | Paralog Number: 1

Signal peptide: Y | GPI Anchor: Y | Predicted trans-membrane segments: 0

Druggability Group : DG1

Targets have been classified into druggability groups (DG) according to their druggability score in network driven prioritizations. DGs range from 1 to 5; the higher the group number, the higher the chance of the target to be druggable

Pfam domains

No Pfam domain information for this protein.

Gene Ontology

Mouse over links to read term descriptions.
No GO information for this protein.

Metabolic Pathways

This gene is not mapped to any metabolic pathway in KEGG.

Structural information

Modbase 3D models:

There are 8 models calculated for this protein. More info on these models, including the models themselves is available at: Modbase

Target Beg Target End Template Template Beg Template End Identity Evalue Model Score MPQS zDope
3 573 2vse (A) 287 860 16.00 0.000039 0.04 1.04378 0.27
241 465 3ww9 (A) 2 244 28.00 0.000075 1 0.655288 -0.79
263 437 4r58 (A) 30 220 34.00 0.003 0.14 0.609113 -0.83
336 482 1rwi (B) 72 216 24.00 0.075 0.8 0.657975 -1.53
196 430 3ww9 (A) 2 244 26.00 0.000028 0.97 0.741494 -0.96
210 314 3ult (A) 19 118 31.00 0.0035 0.2 0.548935 -1.53
291 430 1rwi (B) 72 213 23.00 0.044 0.79 0.669547 -1.42
368 450 4a42 (A) 1502 1591 35.00 0.33 0.78 0.541579 -1.07

Help me make sense of these data.

Target Beg: first modeled residue
Target End: last modeled residue
Template: template structure used for modelling (PDB accession and chain)
Template Beg: first template residue in target-template alignment
Template End: last template residue in target-template alignment
Identity: sequence identity
Evalue: E value for target-template hit
Model Score: GA341 score (>0.7 for reliable model)
MPQS: ModPipe Quality Score (>1.1 for reliable model)
zDope: zDope Score (negative for reliable model)

A more detailed description of these scores is available at the Modbase Model Evaluation Help Pages, and in the papers referenced therein.

PDB Structures:

  • 2MTY:
  • Resolution Method # Atoms # Residues Dep. Date Pub. Date Mod. Date

Expression

Upregulation Percent Ranking Stage Dataset
Upper 80-100% percentile intra-erythrocytic - 0 hs, intra-erythrocytic - 8 hs, intra-erythrocytic - 16 hs, Ring. Otto TD Zanghi G
Upregulation Percent Ranking Stage Dataset
Upper 60-80% percentile merozoite, sporozoite, early ring. PlasmoDB
Upregulation Percent Ranking Stage Dataset
Mid 40-60% percentile intra-erythrocytic - 24 hs, late ring. Otto TD PlasmoDB
Upregulation Percent Ranking Stage Dataset
Lower 20-40% percentile intra-erythrocytic - 40 hs, intra-erythrocytic - 48 hs. Otto TD
Upregulation Percent Ranking Stage Dataset
Lower 0-20% percentile intra-erythrocytic - 32 hs, Oocyst, Sporozoite, Female Gametocyte, Male Gametocyte. Otto TD Zanghi G Lasonder E
Show/Hide expression data references
  • Zanghi G A Specific PfEMP1 Is Expressed in P. falciparum Sporozoites and Plays a Role in Hepatocyte Infection.
  • Otto TD New insights into the blood-stage transcriptome of Plasmodium falciparum using RNA-Seq.
  • Lasonder E Integrated transcriptomic and proteomic analyses of P. falciparum gametocytes. Molecular insight into sex-specific processes and translational repression.
  • PlasmoDB Data on upregulation of P. falciparum genes in different life cycle stages, combined from several microarray experiments available in PlasmoDB

Orthologs

Ortholog group members (OG5_132606)

Species Accession Gene Product
Plasmodium falciparum PF3D7_0702300   sporozoite threonine and asparagine-rich protein
Plasmodium falciparum PF3D7_0401800   Plasmodium exported protein (PHISTb), unknown function
Saccharomyces cerevisiae YML133C   Y' element ATP-dependent helicase
Saccharomyces cerevisiae YLL066C   Y' element ATP-dependent helicase
Saccharomyces cerevisiae YNL339C   Y' element ATP-dependent helicase protein 1 copy 6
Saccharomyces cerevisiae YLL067C   Y' element ATP-dependent helicase
Saccharomyces cerevisiae YLR462W   hypothetical protein
Saccharomyces cerevisiae YGR296W   Y' element ATP-dependent helicase protein 1 copy 3
Saccharomyces cerevisiae YEL077C   Y' element ATP-dependent helicase
Saccharomyces cerevisiae YPR203W   hypothetical protein
Saccharomyces cerevisiae YIL177C   Y' element ATP-dependent helicase
Saccharomyces cerevisiae YOR396W   Y' element ATP-dependent helicase protein 1 copy 8
Saccharomyces cerevisiae YBL111C   hypothetical protein
Saccharomyces cerevisiae YEL075C   hypothetical protein
Saccharomyces cerevisiae YLR464W   hypothetical protein
Saccharomyces cerevisiae YJL225C   Y' element ATP-dependent helicase
Saccharomyces cerevisiae YHL050C   hypothetical protein
Saccharomyces cerevisiae YLR466W   Y' element ATP-dependent helicase protein 1 copy 4
Saccharomyces cerevisiae YLR467W   Y' element ATP-dependent helicase protein 1 copy 5
Saccharomyces cerevisiae YHL049C   hypothetical protein
Saccharomyces cerevisiae YPR202W   hypothetical protein
Saccharomyces cerevisiae YHR219W   hypothetical protein
Saccharomyces cerevisiae YFL064C   hypothetical protein
Saccharomyces cerevisiae YPL283C   Y' element ATP-dependent helicase protein 1 copy 7
Saccharomyces cerevisiae YDR545W   Y' element ATP-dependent helicase protein 1 copy 1
Saccharomyces cerevisiae YER189W   hypothetical protein
Saccharomyces cerevisiae YEL076C-A   hypothetical protein
Saccharomyces cerevisiae YPR204W   Y' element ATP-dependent helicase
Saccharomyces cerevisiae YBL113C   hypothetical protein
Saccharomyces cerevisiae YHR218W   hypothetical protein
Saccharomyces cerevisiae YFL065C   hypothetical protein
Saccharomyces cerevisiae YER190W   Y' element ATP-dependent helicase protein 1 copy 2
Saccharomyces cerevisiae YBL112C   hypothetical protein
Saccharomyces cerevisiae YEL076C   hypothetical protein
Saccharomyces cerevisiae YFL066C   Y' element ATP-dependent helicase

Essentiality

No essentiality data collected for this gene and/or its orthologs.

Phenotypes and Validation (curated)

We have no manually annotated phenotypes for this target. What does this mean? / Care to help?

In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.

In any case, if you have information about papers containing relevant validation data for this target, please contact us.


Annotated validation

No validation data for this target

Associated compounds / Druggability

Known modulators for this target

No chemical compounds associated to this gene

Predicted associations

By orthology with druggable targets
Non orthologous druggable targets
By sequence similarity to non orthologous druggable targets
No additional associated druggable targets

Obtained from network model
No druggable targets predicted through repurposing network model

Assayability

Assay information

No assay information for this target.

Reagent availability

No reagent availability information for this target.

Bibliographic References

No literature references available for this target.

If you have references for this gene, please enter them in a user comment (below) or Contact us.

User comments

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Gene identifier PF3D7_0702300 (Plasmodium falciparum), sporozoite threonine and asparagine-rich protein
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