Detailed information for compound 1205937

Basic information

Technical information
  • TDR Targets ID: 1205937
  • Name: methyl (2S,3aS,6R,7aS)-6-hydroxy-1-[(4-phenyl phenyl)methyl]-2,3,3a,4,5,6,7,7a-octahydroind ole-2-carboxylate
  • MW: 365.465 | Formula: C23H27NO3
  • H donors: 1 H acceptors: 2 LogP: 4.02 Rotable bonds: 5
    Rule of 5 violations (Lipinski): 1
  • SMILES: COC(=O)[C@@H]1C[C@H]2[C@@H](N1Cc1ccc(cc1)c1ccccc1)C[C@@H](CC2)O
  • InChi: 1S/C23H27NO3/c1-27-23(26)22-13-19-11-12-20(25)14-21(19)24(22)15-16-7-9-18(10-8-16)17-5-3-2-4-6-17/h2-10,19-22,25H,11-15H2,1H3/t19-,20+,21-,22-/m0/s1
  • InChiKey: WTXUTKYEZVYCHY-LRSLUSHPSA-N  

Network

Hover on a compound node to display the structore

Synonyms

  • (2S,3aS,6R,7aS)-6-hydroxy-1-[(4-phenylphenyl)methyl]-2,3,3a,4,5,6,7,7a-octahydroindole-2-carboxylic acid methyl ester
  • (2S,3aS,6R,7aS)-6-hydroxy-1-(4-phenylbenzyl)-2,3,3a,4,5,6,7,7a-octahydroindole-2-carboxylic acid methyl ester
  • UPCMLD10ADHK002009:001
  • NCGC00142333-01
  • SDCCGMLS-0091895.P001

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Homo sapiens cytochrome P450, family 3, subfamily A, polypeptide 4 Starlite/ChEMBL No references

Predicted pathogen targets for this compound

By orthology
Species Potential target Known druggable target/s Ortholog Group
Trypanosoma cruzi cytochrome P450, putative Get druggable targets OG5_126554 All targets in OG5_126554
Leishmania infantum cytochrome p450-like protein Get druggable targets OG5_126554 All targets in OG5_126554
Loa Loa (eye worm) cytochrome P450 family protein Get druggable targets OG5_126554 All targets in OG5_126554
Mycobacterium ulcerans cytochrome P450 185A4 Cyp185A4 Get druggable targets OG5_126554 All targets in OG5_126554
Trypanosoma congolense cytochrome P450, putative Get druggable targets OG5_126554 All targets in OG5_126554
Brugia malayi Cytochrome P450 family protein Get druggable targets OG5_126554 All targets in OG5_126554
Leishmania major cytochrome p450-like protein Get druggable targets OG5_126554 All targets in OG5_126554
Loa Loa (eye worm) CYP4Cod1 Get druggable targets OG5_126554 All targets in OG5_126554
Leishmania donovani cytochrome p450-like protein Get druggable targets OG5_126554 All targets in OG5_126554
Trypanosoma cruzi cytochrome P450, putative Get druggable targets OG5_126554 All targets in OG5_126554
Candida albicans similar to C.maltosa N-alkane inducible cytochrome P-450, ALK8 CYP52A11 Get druggable targets OG5_126554 All targets in OG5_126554
Loa Loa (eye worm) hypothetical protein Get druggable targets OG5_126554 All targets in OG5_126554
Leishmania mexicana cytochrome p450-like protein Get druggable targets OG5_126554 All targets in OG5_126554
Candida albicans cytochrome P450 556 Get druggable targets OG5_126554 All targets in OG5_126554
Loa Loa (eye worm) cytochrome P450 family protein Get druggable targets OG5_126554 All targets in OG5_126554
Candida albicans similar to C.maltosa N-alkane inducible cytochrome P-450, ALK8 CYP52A11 Get druggable targets OG5_126554 All targets in OG5_126554
Candida albicans closely related to C.maltosa N-alkane-inducible cytochrome P-450, alkane hydroxylating monooxygenase CYP52A3-b aka P450Alk1A (BA Get druggable targets OG5_126554 All targets in OG5_126554
Trypanosoma brucei gambiense cytochrome P450, putative Get druggable targets OG5_126554 All targets in OG5_126554
Candida albicans cytochrome P450 56 Get druggable targets OG5_126554 All targets in OG5_126554
Trypanosoma brucei cytochrome P450, putative Get druggable targets OG5_126554 All targets in OG5_126554
Brugia malayi Cytochrome P450 family protein Get druggable targets OG5_126554 All targets in OG5_126554
Leishmania braziliensis cytochrome p450-like protein Get druggable targets OG5_126554 All targets in OG5_126554

By sequence similarity to non orthologous known druggable targets
Species Potential target Known druggable target Length Alignment span Identity
Brugia malayi cytochrome P450 cytochrome P450, family 3, subfamily A, polypeptide 4 502 aa 492 aa 24.2 %

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species
Brugia malayi Nuclear hormone receptor-like 1 0.0005 0.0081 0.0081
Schistosoma mansoni photoreceptor-specific nuclear receptor related 0.001 0.0752 0.0752
Echinococcus multilocularis tar DNA binding protein 0.0062 0.8252 0.8567
Wolbachia endosymbiont of Brugia malayi exonuclease III 0.0018 0.1978 0.5
Echinococcus multilocularis JmjC domain containing protein 4 0.0019 0.2076 0.2155
Brugia malayi Ligand-binding domain of nuclear hormone receptor family protein 0.001 0.0752 0.0758
Echinococcus granulosus retinoic acid receptor rxr beta a 0.001 0.0752 0.0758
Brugia malayi Nuclear hormone receptor family member nhr-19 0.001 0.0752 0.0758
Trypanosoma cruzi apurinic/apyrimidinic endonuclease, putative 0.0018 0.1978 0.8342
Trypanosoma cruzi apurinic/apyrimidinic endonuclease 0.0018 0.1978 0.8342
Echinococcus multilocularis hepatocyte nuclear factor 4 alpha 0.001 0.0752 0.0781
Echinococcus granulosus jumonji domain containing 1A 0.0019 0.2076 0.2093
Echinococcus multilocularis phd:f box containing protein 0.0019 0.2076 0.2155
Schistosoma mansoni coup transcription factor 0.001 0.0752 0.0752
Loa Loa (eye worm) hypothetical protein 0.0005 0.0081 0.0081
Onchocerca volvulus 0.001 0.0752 0.1725
Toxoplasma gondii aldehyde dehydrogenase 0.0059 0.7882 0.8579
Plasmodium falciparum JmjC domain-containing protein, putative 0.0019 0.2076 1
Brugia malayi steroid hormone receptor 0.001 0.0752 0.0758
Loa Loa (eye worm) cytochrome P450 family protein 0.0015 0.1483 0.1495
Loa Loa (eye worm) hypothetical protein 0.0005 0.0081 0.0081
Toxoplasma gondii histone lysine demethylase JMJC1/KDM5D/JARID1D 0.0019 0.2076 0.0143
Schistosoma mansoni tar DNA-binding protein 0.0062 0.8252 0.8252
Brugia malayi jmjC domain containing protein 0.0071 0.9632 0.9711
Schistosoma mansoni FTZ-F1 nuclear receptor-like protein 0.001 0.0752 0.0752
Brugia malayi Nuclear hormone receptor-like 1 0.001 0.0752 0.0758
Echinococcus multilocularis mixed lineage leukemia protein mll 0.0009 0.0578 0.06
Schistosoma mansoni jumonji/arid domain-containing protein 0.0073 0.9918 0.9918
Brugia malayi Nuclear hormone receptor family member nhr-40 0.001 0.0752 0.0758
Brugia malayi Nuclear hormone receptor family member nhr-19 0.001 0.0752 0.0758
Echinococcus granulosus phd:f box containing protein 0.0019 0.2076 0.2093
Loa Loa (eye worm) jmjC domain-containing protein 0.0019 0.2076 0.2093
Mycobacterium ulcerans exodeoxyribonuclease III protein XthA 0.0018 0.1978 0.0773
Brugia malayi RNA recognition motif domain containing protein 0.0062 0.8252 0.832
Echinococcus multilocularis jumonji domain containing 1A 0.0019 0.2076 0.2155
Schistosoma mansoni cpg binding protein 0.0037 0.4646 0.4646
Loa Loa (eye worm) nuclear hormone receptor family member nhr-31 0.001 0.0752 0.0758
Schistosoma mansoni ap endonuclease 0.0018 0.1978 0.1978
Brugia malayi photoreceptor-specific nuclear receptor 0.001 0.0752 0.0758
Echinococcus granulosus ecdysone induced protein 78C 0.001 0.0752 0.0758
Loa Loa (eye worm) hypothetical protein 0.0005 0.0081 0.0081
Echinococcus granulosus Nuclear hormone receptor family member nhr 41 0.001 0.0752 0.0758
Schistosoma mansoni aldehyde dehydrogenase 0.0059 0.7882 0.7882
Loa Loa (eye worm) CYP4Cod1 0.0015 0.1483 0.1495
Loa Loa (eye worm) hypothetical protein 0.0005 0.0081 0.0081
Loa Loa (eye worm) hypothetical protein 0.001 0.0752 0.0758
Brugia malayi jmjC domain containing protein 0.0073 0.9918 1
Loa Loa (eye worm) hypothetical protein 0.001 0.0752 0.0758
Brugia malayi Cytochrome P450 family protein 0.0015 0.1483 0.1495
Brugia malayi Cytochrome P450 family protein 0.0015 0.1483 0.1495
Loa Loa (eye worm) hypothetical protein 0.0019 0.2076 0.2093
Echinococcus granulosus lysine specific demethylase 5A 0.0073 0.9918 1
Loa Loa (eye worm) nuclear hormone receptor family member nhr-1 0.001 0.0752 0.0758
Brugia malayi nuclear receptor NHR-88 0.001 0.0752 0.0758
Echinococcus multilocularis Nuclear hormone receptor family member nhr 41 0.001 0.0752 0.0781
Entamoeba histolytica exodeoxyribonuclease III, putative 0.0018 0.1978 0.5
Trypanosoma cruzi JmjC domain, hydroxylase, putative 0.0019 0.2076 1
Loa Loa (eye worm) hypothetical protein 0.001 0.0752 0.0758
Echinococcus multilocularis FTZ F1 alpha 0.001 0.0752 0.0781
Schistosoma mansoni retinoid-x-receptor (RXR) 0.0005 0.0081 0.0081
Echinococcus multilocularis Transcription factor, JmjC domain containing protein 0.0071 0.9632 1
Schistosoma mansoni tar DNA-binding protein 0.0062 0.8252 0.8252
Giardia lamblia Endonuclease/Exonuclease/phosphatase 0.0018 0.1978 0.5
Echinococcus multilocularis cpg binding protein 0.0037 0.4646 0.4824
Schistosoma mansoni tar DNA-binding protein 0.0062 0.8252 0.8252
Brugia malayi Nuclear hormone receptor family member nhr-25 0.001 0.0752 0.0758
Schistosoma mansoni retinoic acid receptor RXR 0.001 0.0752 0.0752
Toxoplasma gondii histone lysine demethylase JMJD6a 0.0019 0.2076 0.0143
Brugia malayi ecdysteroid receptor 0.001 0.0752 0.0758
Schistosoma mansoni protein phosphatase 2C 0.0019 0.2076 0.2076
Schistosoma mansoni retinoid-x-receptor (RXR) 0.001 0.0752 0.0752
Echinococcus granulosus nuclear receptor 2DBD gamma 0.001 0.0752 0.0758
Echinococcus granulosus aldehyde dehydrogenase mitochondrial 0.0059 0.7882 0.7947
Leishmania major aldehyde dehydrogenase, mitochondrial precursor 0.0059 0.7882 1
Loa Loa (eye worm) RNA binding protein 0.0062 0.8252 0.832
Brugia malayi Nuclear hormone receptor family member nhr-14 0.001 0.0752 0.0758
Echinococcus granulosus nuclear receptor subfamily 1 group D 0.0005 0.0081 0.0081
Loa Loa (eye worm) CXXC zinc finger family protein 0.0035 0.436 0.4395
Schistosoma mansoni thyroid hormone receptor 0.001 0.0752 0.0752
Echinococcus multilocularis histone lysine N methyltransferase MLL3 0.0009 0.0578 0.06
Schistosoma mansoni tar DNA-binding protein 0.0062 0.8252 0.8252
Treponema pallidum exodeoxyribonuclease (exoA) 0.0018 0.1978 0.5
Echinococcus granulosus nuclear receptor 2DBD gamma 0.001 0.0752 0.0758
Brugia malayi nuclear receptor RXR 0.0005 0.0081 0.0081
Schistosoma mansoni ap endonuclease 0.0018 0.1978 0.1978
Brugia malayi Ligand-binding domain of nuclear hormone receptor family protein 0.001 0.0752 0.0758
Loa Loa (eye worm) jmjC domain-containing protein 0.0019 0.2076 0.2093
Loa Loa (eye worm) jmjC domain-containing protein 0.0073 0.9918 1
Loa Loa (eye worm) nuclear hormone receptor family member nhr-41 0.001 0.0752 0.0758
Echinococcus granulosus histone lysine N methyltransferase MLL3 0.0009 0.0578 0.0583
Loa Loa (eye worm) histone methyltransferase 0.0011 0.0885 0.0892
Echinococcus multilocularis ecdysone induced protein 78C 0.001 0.0752 0.0781
Schistosoma mansoni nuclear receptor 2DBD-gamma 0.001 0.0752 0.0752
Brugia malayi Nuclear hormone receptor family member nhr-3 0.001 0.0752 0.0758
Loa Loa (eye worm) RNA recognition domain-containing protein domain-containing protein 0.0062 0.8252 0.832
Loa Loa (eye worm) nuclear hormone receptor-like 1 0.0005 0.0081 0.0081
Schistosoma mansoni jumonji domain containing protein 0.0071 0.9632 0.9632
Schistosoma mansoni mixed-lineage leukemia protein mll 0.0005 0.005 0.005
Echinococcus multilocularis nuclear receptor subfamily 1 group D 0.0005 0.0081 0.0084
Echinococcus granulosus FTZ F1 alpha 0.001 0.0752 0.0758
Echinococcus multilocularis thyroid hormone receptor alpha 0.001 0.0752 0.0781
Schistosoma mansoni jumonji/arid domain-containing protein 0.0073 0.9918 0.9918
Echinococcus granulosus COUP TF:Svp nuclear hormone receptor 0.001 0.0752 0.0758
Leishmania major hypothetical protein, conserved 0.0019 0.2076 0.0926
Brugia malayi jmjC domain containing protein 0.0019 0.2076 0.2093
Echinococcus multilocularis aldehyde dehydrogenase, mitochondrial 0.0059 0.7882 0.8183
Loa Loa (eye worm) hypothetical protein 0.001 0.0752 0.0758
Brugia malayi jmjC domain containing protein 0.0019 0.2076 0.2093
Onchocerca volvulus Steroid hormone receptor family member cnr14 homolog 0.001 0.0752 0.1725
Echinococcus granulosus tar DNA binding protein 0.0062 0.8252 0.832
Echinococcus granulosus cpg binding protein 0.0037 0.4646 0.4685
Brugia malayi hypothetical protein 0.0005 0.0081 0.0081
Trypanosoma brucei JmjC domain, hydroxylase, putative 0.0019 0.2076 1
Schistosoma mansoni nuclear hormone receptor nor-1/nor-2 0.001 0.0752 0.0752
Schistosoma mansoni phosphatidylserine receptor 0.0019 0.2076 0.2076
Trypanosoma cruzi JmjC domain, hydroxylase, putative 0.0019 0.2076 1
Loa Loa (eye worm) nuclear hormone receptor family member nhr-49 0.001 0.0752 0.0758
Brugia malayi Nuclear hormone receptor family member nhr-41 0.001 0.0752 0.0758
Echinococcus granulosus histone lysine N methyltransferase MLL3 0.0011 0.0885 0.0892
Loa Loa (eye worm) hypothetical protein 0.0005 0.0081 0.0081
Toxoplasma gondii histone lysine methyltransferase SET1 0.0066 0.886 1
Loa Loa (eye worm) nuclear Hormone Receptor family member 0.001 0.0752 0.0758
Schistosoma mansoni cpg binding protein 0.0037 0.4646 0.4646
Schistosoma mansoni ubiquitously transcribed sex (X/Y) chromosome tetratricopeptide repeat protein-related 0.0019 0.2076 0.2076
Schistosoma mansoni steroid hormone receptor ad4bp 0.001 0.0752 0.0752
Brugia malayi jmjC domain containing protein 0.0019 0.2076 0.2093
Echinococcus granulosus lysine specific demethylase 6a 0.0019 0.2076 0.2093
Loa Loa (eye worm) exodeoxyribonuclease III family protein 0.0018 0.1978 0.1994
Brugia malayi jmjC domain containing protein 0.0019 0.2076 0.2093
Echinococcus granulosus FTZ F1 nuclear receptor protein 0.001 0.0752 0.0758
Leishmania major apurinic/apyrimidinic endonuclease-redox protein 0.0018 0.1978 0.0773
Mycobacterium tuberculosis Probable aldehyde dehydrogenase 0.0059 0.7882 1
Loa Loa (eye worm) hypothetical protein 0.001 0.0752 0.0758
Onchocerca volvulus Protein ultraspiracle homolog 0.001 0.0752 0.1725
Onchocerca volvulus Bile acid receptor homolog 0.001 0.0752 0.1725
Brugia malayi CXXC zinc finger family protein 0.0035 0.436 0.4395
Echinococcus granulosus JmjC domain containing protein 4 0.0019 0.2076 0.2093
Echinococcus multilocularis DNA (apurinic or apyrimidinic site) lyase 0.0018 0.1978 0.2053
Echinococcus multilocularis nuclear receptor 2DBD gamma 0.001 0.0752 0.0781
Echinococcus multilocularis histone lysine N methyltransferase MLL3 0.0011 0.0885 0.0919
Echinococcus granulosus mixed lineage leukemia protein mll 0.0009 0.0578 0.0583
Schistosoma mansoni phd/f-box containing protein 0.0019 0.2076 0.2076
Loa Loa (eye worm) hypothetical protein 0.0019 0.2076 0.2093
Brugia malayi F/Y-rich N-terminus family protein 0.0011 0.0865 0.0872
Schistosoma mansoni ecdysone-induced protein 78c (dr-78) 0.0005 0.0081 0.0081
Schistosoma mansoni tar DNA-binding protein 0.0062 0.8252 0.8252
Brugia malayi Steroid receptor seven-up type 2 0.001 0.0752 0.0758
Plasmodium vivax JmjC domain containing protein 0.0019 0.2076 1
Loa Loa (eye worm) hypothetical protein 0.001 0.0752 0.0758
Schistosoma mansoni thyroid hormone receptor 0.001 0.0752 0.0752
Loa Loa (eye worm) TAR-binding protein 0.0062 0.8252 0.832
Schistosoma mansoni RAR-like nuclear receptor 0.001 0.0752 0.0752
Echinococcus granulosus Transcription factor JmjC domain containing protein 0.0071 0.9632 0.9711
Echinococcus granulosus hepatocyte nuclear factor 4 alpha 0.001 0.0752 0.0758
Trichomonas vaginalis ap endonuclease, putative 0.0018 0.1978 1
Brugia malayi Nuclear hormone receptor family member nhr-25 0.001 0.0752 0.0758
Loa Loa (eye worm) nuclear hormone receptor family member nhr-40 0.001 0.0752 0.0758
Brugia malayi exodeoxyribonuclease III family protein 0.0018 0.1978 0.1994
Echinococcus multilocularis nuclear receptor 2DBD gamma 0.001 0.0752 0.0781
Echinococcus granulosus Jumonji AT rich interactive domain 1B 0.0021 0.2363 0.2382
Brugia malayi Nuclear hormone receptor family member nhr-1 0.001 0.0752 0.0758
Loa Loa (eye worm) cytochrome P450 family protein 0.0015 0.1483 0.1495
Brugia malayi hypothetical protein 0.0005 0.0081 0.0081
Echinococcus multilocularis Jumonji, AT rich interactive domain 1B 0.0021 0.2363 0.2453
Brugia malayi nuclear hormone receptor 0.001 0.0752 0.0758
Onchocerca volvulus 0.0035 0.436 1
Schistosoma mansoni nuclear hormone receptor 0.001 0.0752 0.0752
Echinococcus multilocularis FTZ F1 nuclear receptor protein 0.001 0.0752 0.0781
Trypanosoma brucei apurinic/apyrimidinic endonuclease, putative 0.0018 0.1978 0.8342
Loa Loa (eye worm) nuclear hormone receptor family member nhr-14 0.001 0.0752 0.0758
Echinococcus granulosus DNA apurinic or apyrimidinic site lyase 0.0018 0.1978 0.1994
Loa Loa (eye worm) hypothetical protein 0.0019 0.2076 0.2093
Schistosoma mansoni mixed-lineage leukemia protein mll 0.0009 0.0578 0.0578
Loa Loa (eye worm) hypothetical protein 0.0011 0.0863 0.087
Brugia malayi TAR-binding protein 0.0062 0.8252 0.832
Brugia malayi RNA binding protein 0.0062 0.8252 0.832
Brugia malayi Nuclear hormone receptor family member nhr-49 0.001 0.0752 0.0758
Schistosoma mansoni Tr4/Tr2 (homologue) 0.001 0.0752 0.0752
Loa Loa (eye worm) steroid hormone receptor 0.001 0.0752 0.0758
Schistosoma mansoni aldehyde dehydrogenase 0.0059 0.7882 0.7882
Brugia malayi Nuclear hormone receptor-like 1 0.0005 0.0081 0.0081
Echinococcus multilocularis lysine specific demethylase 5A 0.0071 0.9632 1
Schistosoma mansoni cpg binding protein 0.0035 0.436 0.436
Trichomonas vaginalis ap endonuclease, putative 0.0018 0.1978 1
Echinococcus multilocularis COUP TF:Svp nuclear hormone receptor 0.001 0.0752 0.0781
Schistosoma mansoni jumonji domain containing protein 0.0019 0.2076 0.2076
Mycobacterium ulcerans aldehyde dehydrogenase 0.0059 0.7882 1
Mycobacterium ulcerans aldehyde dehydrogenase 0.0059 0.7882 1
Brugia malayi Nuclear hormone receptor family member nhr-31 0.001 0.0752 0.0758
Echinococcus multilocularis lysine specific demethylase 6a 0.0019 0.2076 0.2155
Loa Loa (eye worm) hypothetical protein 0.001 0.0752 0.0758
Loa Loa (eye worm) hypothetical protein 0.001 0.0752 0.0758
Loa Loa (eye worm) jmjC domain-containing protein 0.0019 0.2076 0.2093
Mycobacterium ulcerans aldehyde dehydrogenase 0.0059 0.7882 1

Activities

Activity type Activity value Assay description Source Reference
Potency (ADMET) = 19.9526 um PUBCHEM_BIOASSAY: qHTS Assay for Activators of Cytochrome P450 3A4. (Class of assay: confirmatory) [Related pubchem assays: 410 ] ChEMBL. No reference
Potency (ADMET) = 19.9526 um PUBCHEM_BIOASSAY: qHTS Assay for Inhibitors and Substrates of Cytochrome P450 3A4. (Class of assay: confirmatory) [Related pubchem assays: 410 ] ChEMBL. No reference

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

No literature references available for this target.

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