Detailed information for compound 1263974

Basic information

Technical information
  • TDR Targets ID: 1263974
  • Name: 1-[(4-fluorophenyl)methyl]-N-hydroxy-N-methyl -3-[(4-methylpiperazin-1-yl)methyl]pyrrolo[3, 2-d]pyridine-5-carboxamide
  • MW: 411.473 | Formula: C22H26FN5O2
  • H donors: 1 H acceptors: 3 LogP: 1.58 Rotable bonds: 6
    Rule of 5 violations (Lipinski): 1
  • SMILES: CN1CCN(CC1)Cc1cn(c2c1cc(nc2)C(=O)N(O)C)Cc1ccc(cc1)F
  • InChi: 1S/C22H26FN5O2/c1-25-7-9-27(10-8-25)14-17-15-28(13-16-3-5-18(23)6-4-16)21-12-24-20(11-19(17)21)22(29)26(2)30/h3-6,11-12,15,30H,7-10,13-14H2,1-2H3
  • InChiKey: YUPZNRBJZQXNNA-UHFFFAOYSA-N  

Network

Hover on a compound node to display the structore

Synonyms

  • 1-[(4-fluorophenyl)methyl]-N-hydroxy-N-methyl-3-[(4-methyl-1-piperazinyl)methyl]-5-pyrrolo[3,2-d]pyridinecarboxamide
  • 1-(4-fluorobenzyl)-N-hydroxy-N-methyl-3-[(4-methylpiperazin-1-yl)methyl]pyrrolo[3,2-d]pyridine-5-carboxamide
  • 1H-Pyrrolo[2,3-c]pyridine-5-carboxamide, 1-[(4-fluorophenyl)methyl]-N-hydroxy-N-methyl-3-[(4-methylpiperazin-1-yl)methyl]-
  • AIDS-350859
  • AIDS350859

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Human immunodeficiency virus 1 Integrase Starlite/ChEMBL References

Predicted pathogen targets for this compound

By orthology
Species Potential target Known druggable target/s Ortholog Group
Trypanosoma congolense RNA helicase, putative Get druggable targets OG5_139608 All targets in OG5_139608
Trypanosoma brucei RNA helicase, putative Get druggable targets OG5_139608 All targets in OG5_139608
Schistosoma mansoni hypothetical protein Get druggable targets OG5_139608 All targets in OG5_139608
Plasmodium yoelii integrase-related Get druggable targets OG5_139608 All targets in OG5_139608

By sequence similarity to non orthologous known druggable targets
No druggable targets predicted by sequence similarity

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species
Onchocerca volvulus Peroxidasin homolog 0.0703 1 1
Loa Loa (eye worm) animal heme peroxidase 0.0703 1 1
Onchocerca volvulus Dual oxidase homolog 0.0703 1 1
Loa Loa (eye worm) hypothetical protein 0.0703 1 1
Loa Loa (eye worm) hypothetical protein 0.0703 1 1
Loa Loa (eye worm) animal heme peroxidase 0.0703 1 1
Loa Loa (eye worm) hypothetical protein 0.0703 1 1
Toxoplasma gondii EGF family domain-containing protein 0.0227 0 0.5
Giardia lamblia High cysteine protein 0.0227 0 0.5
Onchocerca volvulus 0.0703 1 1
Onchocerca volvulus Peroxidase homolog 0.0703 1 1
Loa Loa (eye worm) hypothetical protein 0.0703 1 1
Schistosoma mansoni peroxidasin 0.0703 1 1
Onchocerca volvulus Peroxidase homolog 0.0703 1 1
Loa Loa (eye worm) hypothetical protein 0.0703 1 1
Onchocerca volvulus 0.0703 1 1
Loa Loa (eye worm) hypothetical protein 0.0703 1 1
Loa Loa (eye worm) hypothetical protein 0.0703 1 1
Loa Loa (eye worm) hypothetical protein 0.0703 1 1
Echinococcus granulosus peroxidasin 0.0703 1 1
Brugia malayi Animal haem peroxidase family protein 0.0703 1 1
Loa Loa (eye worm) hypothetical protein 0.0703 1 1
Brugia malayi Animal haem peroxidase family protein 0.0703 1 1
Onchocerca volvulus Chorion peroxidase homolog 0.0703 1 1
Brugia malayi Animal haem peroxidase family protein 0.0703 1 1
Loa Loa (eye worm) animal heme peroxidase 0.0703 1 1
Schistosoma mansoni peroxidasin 0.0703 1 1
Onchocerca volvulus Peroxidasin homolog 0.0703 1 1
Loa Loa (eye worm) hypothetical protein 0.0703 1 1
Onchocerca volvulus 0.0703 1 1
Loa Loa (eye worm) hypothetical protein 0.0703 1 1
Loa Loa (eye worm) hypothetical protein 0.0703 1 1
Loa Loa (eye worm) hypothetical protein 0.0703 1 1
Loa Loa (eye worm) hypothetical protein 0.0703 1 1
Brugia malayi Blistered cuticle protein 3 0.0703 1 1
Brugia malayi Animal haem peroxidase family protein 0.0703 1 1
Loa Loa (eye worm) animal heme peroxidase 0.0703 1 1
Loa Loa (eye worm) blistered cuticle protein 3 0.0703 1 1
Echinococcus multilocularis peroxidasin 0.0703 1 1
Brugia malayi Animal haem peroxidase family protein 0.0703 1 1
Brugia malayi Peroxidasin 0.0703 1 1

Activities

Activity type Activity value Assay description Source Reference
CC50 (ADMET) > 224 uM Cytotoxicity against human CEM-SS cells by XTT assay ChEMBL. 21036042
IC50 (binding) = 534 nM Inhibition of HIV1 RF integrase after 50 mins by strand transfer scintillation proximity assay ChEMBL. 21036042

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

No literature references available for this target.

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