Detailed information for compound 14340

Basic information

Technical information
  • TDR Targets ID: 14340
  • Name: 1-ethyl-3-[[1-(3-methylbutyl)benzimidazol-2-y l]methyl]benzimidazol-2-one
  • MW: 362.468 | Formula: C22H26N4O
  • H donors: 0 H acceptors: 2 LogP: 3.96 Rotable bonds: 6
    Rule of 5 violations (Lipinski): 1
  • SMILES: CCn1c(=O)n(c2c1cccc2)Cc1nc2c(n1CCC(C)C)cccc2
  • InChi: 1S/C22H26N4O/c1-4-24-19-11-7-8-12-20(19)26(22(24)27)15-21-23-17-9-5-6-10-18(17)25(21)14-13-16(2)3/h5-12,16H,4,13-15H2,1-3H3
  • InChiKey: XYGHRARQRIURDK-UHFFFAOYSA-N  

Network

Hover on a compound node to display the structore

Synonyms

  • 1-ethyl-3-[(1-isopentylbenzimidazol-2-yl)methyl]benzimidazol-2-one
  • 1-ethyl-3-[(1-isopentyl-2-benzimidazolyl)methyl]-2-benzimidazolone
  • 1-ethyl-3-[(1-isoamylbenzimidazol-2-yl)methyl]benzimidazol-2-one

Targets

Known targets for this compound

No curated genes were found associated with this compound

Predicted pathogen targets for this compound

By orthology
No druggable targets predicted by orthology data
By sequence similarity to non orthologous known druggable targets
No druggable targets predicted by sequence similarity

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species
Loa Loa (eye worm) hypothetical protein 0.0066 0.0953 0.1078
Trichomonas vaginalis aldehyde oxidase, putative 0.0182 0.5825 0.5
Schistosoma mansoni zinc finger protein 0.0066 0.0953 0.1078
Brugia malayi hypothetical protein 0.0066 0.0953 0.0953
Echinococcus multilocularis FTZ F1 alpha 0.0139 0.4046 0.4575
Schistosoma mansoni nuclear hormone receptor nor-1/nor-2 0.0139 0.4046 0.4575
Loa Loa (eye worm) RNA recognition domain-containing protein domain-containing protein 0.0067 0.103 0.1164
Loa Loa (eye worm) hypothetical protein 0.0066 0.0953 0.1078
Brugia malayi Nuclear hormone receptor family member nhr-49 0.0139 0.4046 0.4046
Brugia malayi hypothetical protein 0.0074 0.1284 0.1284
Brugia malayi Nuclear hormone receptor-like 1 0.0139 0.4046 0.4046
Loa Loa (eye worm) hypothetical protein 0.0074 0.1284 0.1452
Schistosoma mansoni FTZ-F1 nuclear receptor-like protein 0.0139 0.4046 0.4575
Brugia malayi Nuclear hormone receptor family member nhr-25 0.0139 0.4046 0.4046
Brugia malayi Nuclear hormone receptor E75 0.0066 0.0953 0.0953
Echinococcus granulosus thyroid hormone receptor alpha 0.0066 0.0953 0.1078
Brugia malayi hypothetical protein 0.0069 0.1097 0.1097
Schistosoma mansoni coup transcription factor 0.0139 0.4046 0.4575
Onchocerca volvulus Steroid hormone receptor family member cnr14 homolog 0.0139 0.4046 0.4575
Brugia malayi hypothetical protein 0.0074 0.1284 0.1284
Echinococcus multilocularis jun protein 0.0088 0.1891 0.2139
Schistosoma mansoni Guanine nucleotide-binding protein G(s) subunit alpha (Adenylate cyclase-stimulating G alpha protein) 0.0049 0.0241 0.0273
Loa Loa (eye worm) hypothetical protein 0.0066 0.0953 0.1078
Brugia malayi Ligand-binding domain of nuclear hormone receptor family protein 0.0139 0.4046 0.4046
Trichomonas vaginalis xanthine dehydrogenase, putative 0.0182 0.5825 0.5
Loa Loa (eye worm) hypothetical protein 0.0253 0.8843 1
Chlamydia trachomatis Ssodium-dependent amino acid transporter 0.0043 0 0.5
Plasmodium falciparum transporter, putative 0.0043 0 0.5
Brugia malayi nuclear receptor subfamily 1, group D, member 1, putative 0.0066 0.0953 0.0953
Loa Loa (eye worm) hypothetical protein 0.0074 0.1284 0.1452
Echinococcus granulosus guanine nucleotide binding protein Gs subunit 0.0049 0.0241 0.0273
Brugia malayi conserved hypotetical protein 0.0066 0.0953 0.0953
Echinococcus multilocularis serotonin transporter 0.0253 0.8843 1
Loa Loa (eye worm) hypothetical protein 0.0074 0.1284 0.1452
Loa Loa (eye worm) hypothetical protein 0.0074 0.1284 0.1452
Echinococcus multilocularis hepatocyte nuclear factor 4 alpha 0.0139 0.4046 0.4575
Onchocerca volvulus Bile acid receptor homolog 0.0139 0.4046 0.4575
Loa Loa (eye worm) hypothetical protein 0.0139 0.4046 0.4575
Echinococcus granulosus serotonin transporter 0.0253 0.8843 1
Brugia malayi Nuclear hormone receptor family member nhr-25 0.0139 0.4046 0.4046
Schistosoma mansoni retinoic acid receptor RXR 0.0139 0.4046 0.4575
Schistosoma mansoni nuclear hormone receptor 0.0066 0.0953 0.1078
Brugia malayi Nuclear hormone receptor family member nhr-19 0.0139 0.4046 0.4046
Brugia malayi TAR-binding protein 0.0067 0.103 0.103
Echinococcus multilocularis Nuclear hormone receptor HR96 0.0066 0.0953 0.1078
Echinococcus granulosus Nuclear hormone receptor HR96 0.0066 0.0953 0.1078
Echinococcus multilocularis arachidonate 5 lipoxygenase 0.0058 0.0624 0.0705
Brugia malayi bZIP transcription factor family protein 0.0088 0.1891 0.1891
Onchocerca volvulus 0.0066 0.0953 0.1078
Echinococcus granulosus hepatocyte nuclear factor 4 alpha 0.0139 0.4046 0.4575
Brugia malayi Nuclear hormone receptor E75 0.0066 0.0953 0.0953
Brugia malayi nuclear receptor NHR-67 0.0066 0.0953 0.0953
Onchocerca volvulus 0.0253 0.8843 1
Schistosoma mansoni ecdysone-induced protein 78c (dr-78) 0.0074 0.1284 0.1452
Echinococcus multilocularis Basic leucine zipper (bZIP) transcription factor 0.0088 0.1891 0.2139
Schistosoma mansoni lipoxygenase 0.0058 0.0624 0.0705
Echinococcus granulosus jun protein 0.0088 0.1891 0.2139
Brugia malayi nuclear hormone receptor 0.0139 0.4046 0.4046
Treponema pallidum sodium- and chloride- dependent transporter 0.0253 0.8843 0.5
Echinococcus granulosus nuclear receptor subfamily 1 group D 0.0074 0.1284 0.1452
Brugia malayi RNA binding protein 0.0067 0.103 0.103
Loa Loa (eye worm) RNA binding protein 0.0067 0.103 0.1164
Brugia malayi Ligand-binding domain of nuclear hormone receptor family protein 0.0139 0.4046 0.4046
Brugia malayi tailless protein 0.0066 0.0953 0.0953
Brugia malayi Nuclear hormone receptor family member nhr-3 0.0139 0.4046 0.4046
Loa Loa (eye worm) TAR-binding protein 0.0067 0.103 0.1164
Loa Loa (eye worm) hypothetical protein 0.0066 0.0953 0.1078
Loa Loa (eye worm) fli-1 protein 0.0234 0.8041 0.9093
Brugia malayi Sodium:neurotransmitter symporter family protein 0.0253 0.8843 0.8843
Loa Loa (eye worm) nuclear hormone receptor family member nhr-41 0.0139 0.4046 0.4575
Loa Loa (eye worm) hypothetical protein 0.0139 0.4046 0.4575
Loa Loa (eye worm) hypothetical protein 0.0139 0.4046 0.4575
Loa Loa (eye worm) nuclear hormone receptor-like 1 0.0074 0.1284 0.1452
Loa Loa (eye worm) hypothetical protein 0.0066 0.0965 0.1092
Brugia malayi Nuclear hormone receptor family member nhr-19 0.0139 0.4046 0.4046
Echinococcus granulosus guanine nucleotide binding protein Gs subunit 0.0049 0.0241 0.0273
Echinococcus granulosus tar DNA binding protein 0.0067 0.103 0.1164
Echinococcus granulosus nuclear receptor 2DBD gamma 0.0066 0.0953 0.1078
Loa Loa (eye worm) GTP-binding regulatory protein Gs alpha-S chain 0.0049 0.0241 0.0273
Brugia malayi Cytochrome P450 family protein 0.0051 0.0341 0.0341
Toxoplasma gondii Sodium:neurotransmitter symporter family protein 0.0043 0 0.5
Brugia malayi nuclear receptor NHR-88 0.0139 0.4046 0.4046
Plasmodium vivax amine transporter, putative 0.0043 0 0.5
Brugia malayi orphan nuclear receptor NR2E1 0.0066 0.0953 0.0953
Loa Loa (eye worm) hypothetical protein 0.0066 0.0953 0.1078
Schistosoma mansoni nuclear hormone receptor 0.0139 0.4046 0.4575
Echinococcus multilocularis nuclear receptor 2DBD gamma 0.0139 0.4046 0.4575
Loa Loa (eye worm) serotonin transporter b 0.0253 0.8843 1
Echinococcus granulosus arachidonate 5 lipoxygenase 0.0058 0.0624 0.0705
Echinococcus granulosus GA binding protein alpha chain 0.0077 0.1436 0.1624
Loa Loa (eye worm) cytochrome P450 family protein 0.0051 0.0341 0.0385
Loa Loa (eye worm) hypothetical protein 0.0066 0.0953 0.1078
Echinococcus granulosus Nuclear hormone receptor family member nhr 41 0.0139 0.4046 0.4575
Echinococcus multilocularis nuclear receptor 2DBD gamma 0.0066 0.0953 0.1078
Brugia malayi ecdysone receptor 0.0066 0.0953 0.0953
Loa Loa (eye worm) nuclear hormone receptor family member nhr-40 0.0139 0.4046 0.4575
Loa Loa (eye worm) hypothetical protein 0.0139 0.4046 0.4575
Onchocerca volvulus Nuclear receptor subfamily 6 group A member 1 homolog 0.0066 0.0953 0.1078
Mycobacterium ulcerans carbon monoxide dehydrogenase 0.012 0.3248 1
Schistosoma mansoni gabp alpha 0.0077 0.1436 0.1624
Loa Loa (eye worm) hypothetical protein 0.0066 0.0953 0.1078
Loa Loa (eye worm) nuclear hormone receptor family member nhr-49 0.0139 0.4046 0.4575
Loa Loa (eye worm) solute carrier family 6 member 4 0.0253 0.8843 1
Brugia malayi hypothetical protein 0.0066 0.0953 0.0953
Brugia malayi nuclear hormone receptor 0.0066 0.0953 0.0953
Mycobacterium ulcerans carbon monoxyde dehydrogenase large chain CoxL 0.0086 0.1791 0.4783
Schistosoma mansoni Guanine nucleotide-binding protein G(s) subunit alpha (Adenylate cyclase-stimulating G alpha protein) 0.0049 0.0241 0.0273
Loa Loa (eye worm) D-ets-4 DNA binding domain-containing protein 0.0077 0.1436 0.1624
Loa Loa (eye worm) hypothetical protein 0.0066 0.0953 0.1078
Echinococcus multilocularis guanine nucleotide binding protein G(s) subunit 0.0049 0.0241 0.0273
Echinococcus multilocularis tar DNA binding protein 0.0067 0.103 0.1164
Echinococcus multilocularis FTZ F1 nuclear receptor protein 0.0139 0.4046 0.4575
Loa Loa (eye worm) hypothetical protein 0.0253 0.8843 1
Loa Loa (eye worm) hypothetical protein 0.0066 0.0953 0.1078
Echinococcus granulosus Nuclear hormone receptor HR96 0.0066 0.0953 0.1078
Loa Loa (eye worm) hypothetical protein 0.0066 0.0953 0.1078
Echinococcus granulosus nuclear receptor subfamily 4 group A 0.0066 0.0953 0.1078
Echinococcus multilocularis Nuclear hormone receptor HR96 0.0066 0.0953 0.1078
Loa Loa (eye worm) norepinephrine transporter 0.0253 0.8843 1
Loa Loa (eye worm) DR-78 0.0066 0.0953 0.1078
Brugia malayi steroid hormone receptor 0.0139 0.4046 0.4046
Loa Loa (eye worm) nuclear Hormone Receptor family member 0.0139 0.4046 0.4575
Brugia malayi nuclear receptor NHR-88 0.0066 0.0953 0.0953
Echinococcus granulosus COUP TF:Svp nuclear hormone receptor 0.0139 0.4046 0.4575
Onchocerca volvulus 0.0139 0.4046 0.4575
Onchocerca volvulus 0.0069 0.1097 0.124
Echinococcus granulosus retinoic acid receptor rxr beta a 0.0139 0.4046 0.4575
Schistosoma mansoni nuclear receptor 2DBD-gamma 0.0139 0.4046 0.4575
Schistosoma mansoni nuclear hormone receptor superfamily protein-related 0.0066 0.0953 0.1078
Brugia malayi Nuclear hormone receptor family member nhr-14 0.0139 0.4046 0.4046
Loa Loa (eye worm) nuclear receptor nhr-7B 0.0066 0.0953 0.1078
Brugia malayi Nuclear hormone receptor family member nhr-41 0.0139 0.4046 0.4046
Brugia malayi Nuclear hormone receptor family member nhr-31 0.0139 0.4046 0.4046
Schistosoma mansoni nuclear receptor 0.0066 0.0953 0.1078
Schistosoma mansoni tar DNA-binding protein 0.0067 0.103 0.1164
Mycobacterium tuberculosis Probable carbon monoxyde dehydrogenase (large chain) 0.0086 0.1791 1
Echinococcus multilocularis nuclear receptor nhr 48 0.0066 0.0953 0.1078
Schistosoma mansoni sodium/chloride dependent transporter 0.0253 0.8843 1
Loa Loa (eye worm) nuclear hormone receptor 0.0066 0.0953 0.1078
Schistosoma mansoni photoreceptor-specific nuclear receptor related 0.0139 0.4046 0.4575
Onchocerca volvulus Protein ultraspiracle homolog 0.0139 0.4046 0.4575
Schistosoma mansoni nuclear hormone receptor 0.0066 0.0953 0.1078
Mycobacterium ulcerans carbon monoxyde dehydrogenase medium chain CoxM 0.0061 0.0769 0.1125
Schistosoma mansoni retinoid-x-receptor (RXR) 0.0139 0.4046 0.4575
Echinococcus granulosus FTZ F1 alpha 0.0139 0.4046 0.4575
Brugia malayi Nuclear hormone receptor family member nhr-1 0.0139 0.4046 0.4046
Echinococcus multilocularis COUP TF:Svp nuclear hormone receptor 0.0139 0.4046 0.4575
Loa Loa (eye worm) hypothetical protein 0.0066 0.0953 0.1078
Loa Loa (eye worm) nuclear hormone receptor family member nhr-31 0.0139 0.4046 0.4575
Schistosoma mansoni hypothetical protein 0.0072 0.1198 0.1355
Loa Loa (eye worm) hypothetical protein 0.0139 0.4046 0.4575
Echinococcus multilocularis GA binding protein alpha chain 0.0077 0.1436 0.1624
Echinococcus granulosus FTZ F1 nuclear receptor protein 0.0139 0.4046 0.4575
Schistosoma mansoni RAR-like nuclear receptor 0.0139 0.4046 0.4575
Echinococcus multilocularis ecdysone induced protein 78C 0.0139 0.4046 0.4575
Schistosoma mansoni jun-related protein 0.0072 0.1198 0.1355
Toxoplasma gondii Sodium:neurotransmitter symporter family protein 0.0043 0 0.5
Brugia malayi RNA recognition motif domain containing protein 0.0067 0.103 0.103
Loa Loa (eye worm) hypothetical protein 0.0086 0.179 0.2024
Brugia malayi nuclear hormone receptor family member nhr-6 0.0066 0.0953 0.0953
Loa Loa (eye worm) nuclear hormone receptor family member nhr-14 0.0139 0.4046 0.4575
Loa Loa (eye worm) nuclear hormone receptor family member nhr-1 0.0139 0.4046 0.4575
Mycobacterium ulcerans aerobic-type carbon monoxide dehydrogenase subunit CoxL_2 0.0086 0.1791 0.4783
Echinococcus multilocularis thyroid hormone receptor alpha 0.0139 0.4046 0.4575
Echinococcus granulosus nuclear receptor nhr 48 0.0066 0.0953 0.1078
Toxoplasma gondii Sodium:neurotransmitter symporter family protein 0.0043 0 0.5
Mycobacterium ulcerans aerobic-type carbon monoxide dehydrogenase subunit CoxM_2 0.0061 0.0769 0.1125
Loa Loa (eye worm) hypothetical protein 0.0066 0.0953 0.1078
Schistosoma mansoni thyroid hormone receptor 0.0139 0.4046 0.4575
Brugia malayi Nuclear hormone receptor-like 1 0.0074 0.1284 0.1284
Echinococcus multilocularis nuclear receptor subfamily 4 group A 0.0066 0.0953 0.1078
Brugia malayi Fli-1 protein 0.0234 0.8041 0.8041
Onchocerca volvulus 0.0066 0.0953 0.1078
Brugia malayi GTP-binding regulatory protein Gs alpha-S chain, putative 0.0049 0.0241 0.0241
Plasmodium vivax hypothetical protein, conserved 0.0043 0 0.5
Plasmodium falciparum amino acid transporter, putative 0.0043 0 0.5
Loa Loa (eye worm) hypothetical protein 0.0253 0.8843 1
Echinococcus multilocularis retinoic acid receptor rxr beta a retinoic acid receptor rxr alpha a retinoic acid receptor rxr alpha 0.0066 0.0953 0.1078
Loa Loa (eye worm) hypothetical protein 0.0139 0.4046 0.4575
Schistosoma mansoni tar DNA-binding protein 0.0067 0.103 0.1164
Brugia malayi Nuclear hormone receptor-like 1 0.0074 0.1284 0.1284
Schistosoma mansoni tar DNA-binding protein 0.0067 0.103 0.1164
Loa Loa (eye worm) hypothetical protein 0.0119 0.3191 0.3608
Echinococcus granulosus ecdysone induced protein 78C 0.0139 0.4046 0.4575
Brugia malayi nuclear receptor RXR 0.0074 0.1284 0.1284
Schistosoma mansoni Guanine nucleotide-binding protein G(s) subunit alpha (Adenylate cyclase-stimulating G alpha protein) 0.0049 0.0241 0.0273
Echinococcus granulosus Basic leucine zipper bZIP transcription factor 0.0088 0.1891 0.2139
Toxoplasma gondii hypothetical protein 0.0043 0 0.5
Toxoplasma gondii hypothetical protein 0.0043 0 0.5
Loa Loa (eye worm) nuclear receptor NHR-67 0.0066 0.0953 0.1078
Loa Loa (eye worm) hypothetical protein 0.0139 0.4046 0.4575
Loa Loa (eye worm) hypothetical protein 0.0074 0.1284 0.1452
Schistosoma mansoni nuclear receptor 0.0066 0.0953 0.1078
Schistosoma mansoni thyroid hormone receptor 0.0139 0.4046 0.4575
Echinococcus multilocularis Nuclear hormone receptor family member nhr 41 0.0139 0.4046 0.4575
Schistosoma mansoni tar DNA-binding protein 0.0067 0.103 0.1164
Brugia malayi nuclear hormone receptor family member odr-7 0.0066 0.0953 0.0953
Brugia malayi Nuclear hormone receptor family member nhr-40 0.0139 0.4046 0.4046
Brugia malayi photoreceptor-specific nuclear receptor 0.0139 0.4046 0.4046
Brugia malayi nuclear receptor RXR 0.0066 0.0953 0.0953
Brugia malayi Ets-domain containing protein 0.0077 0.1436 0.1436
Trichomonas vaginalis xanthine dehydrogenase, putative 0.0182 0.5825 0.5
Schistosoma mansoni ets-related 0.0234 0.8041 0.9093
Echinococcus multilocularis nuclear receptor subfamily 1 group D 0.0074 0.1284 0.1452
Onchocerca volvulus Nuclear receptor subfamily 6 group A member 1 homolog 0.0066 0.0953 0.1078
Schistosoma mansoni Tr4/Tr2 (homologue) 0.0139 0.4046 0.4575
Schistosoma mansoni nuclear receptor nhr-48 0.0066 0.0953 0.1078
Loa Loa (eye worm) hypothetical protein 0.0066 0.0953 0.1078
Loa Loa (eye worm) hypothetical protein 0.0139 0.4046 0.4575
Schistosoma mansoni tar DNA-binding protein 0.0067 0.103 0.1164
Echinococcus granulosus nuclear receptor 2DBD gamma 0.0139 0.4046 0.4575
Schistosoma mansoni norepinephrine/norepinephrine transporter 0.0253 0.8843 1
Echinococcus granulosus nuclear receptor 2DBD gamma 0.0139 0.4046 0.4575
Schistosoma mansoni steroid hormone receptor ad4bp 0.0139 0.4046 0.4575
Echinococcus multilocularis nuclear receptor 2DBD gamma 0.0139 0.4046 0.4575
Schistosoma mansoni hepatocyte nuclear factor 4-alpha (hnf-4-alpha) 0.0066 0.0953 0.1078
Schistosoma mansoni retinoid-x-receptor (RXR) 0.0074 0.1284 0.1452
Echinococcus multilocularis guanine nucleotide binding protein G(s) subunit 0.0049 0.0241 0.0273
Loa Loa (eye worm) steroid hormone receptor 0.0139 0.4046 0.4575
Brugia malayi Ets-domain containing protein 0.0077 0.1436 0.1436
Brugia malayi ecdysteroid receptor 0.0139 0.4046 0.4046
Brugia malayi Steroid receptor seven-up type 2 0.0139 0.4046 0.4046

Activities

Activity type Activity value Assay description Source Reference
CC50 (functional) = 18.6 uM Cytotoxic activity against uninfected HEp-2 human lung epithelial carcinoma cell line ChEMBL. 14980651
CC50 (functional) = 18.6 uM Cytotoxic activity against uninfected HEp-2 human lung epithelial carcinoma cell line ChEMBL. 14980651
EC50 (functional) = 0.011 uM Antiviral activity against respiratory syncytial virus in HEp-2 human lung epithelial carcinoma cell line ChEMBL. 14980651
EC50 (functional) = 0.011 uM Antiviral activity against respiratory syncytial virus in HEp-2 human lung epithelial carcinoma cell line ChEMBL. 14980651
Therapeutic index (ADMET) = 1690 Therapeutic index expressed as the ratio between CC50 and EC50 ChEMBL. 14980651

Phenotypes

Whole-cell/tissue/organism interactions

Species name Source Reference Is orphan
Homo sapiens ChEMBL23 14980651

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

1 literature reference was collected for this gene.

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