Detailed information for compound 166235

Basic information

Technical information
  • TDR Targets ID: 166235
  • Name: 4-(3-fluoro-5,5,8,8-tetramethyl-6,7-dihydrona phthalene-2-carbonyl)benzoic acid
  • MW: 354.415 | Formula: C22H23FO3
  • H donors: 1 H acceptors: 3 LogP: 6.02 Rotable bonds: 3
    Rule of 5 violations (Lipinski): 1
  • SMILES: Fc1cc2c(cc1C(=O)c1ccc(cc1)C(=O)O)C(C)(C)CCC2(C)C
  • InChi: 1S/C22H23FO3/c1-21(2)9-10-22(3,4)17-12-18(23)15(11-16(17)21)19(24)13-5-7-14(8-6-13)20(25)26/h5-8,11-12H,9-10H2,1-4H3,(H,25,26)
  • InChiKey: WWPNKNDRIFQGQU-UHFFFAOYSA-N  

Network

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Synonyms

  • 4-(7-fluoro-1,1,4,4-tetramethyl-tetralin-6-carbonyl)benzoic acid
  • 4-[(7-fluoro-1,1,4,4-tetramethyl-6-tetralinyl)-oxomethyl]benzoic acid
  • 4-[(3-fluoro-5,5,8,8-tetramethyl-6,7-dihydronaphthalen-2-yl)carbonyl]benzoic acid
  • 4-(3-fluoro-5,5,8,8-tetramethyl6,7-dihydronaphthalene-2-carbonyl)benzoic acid

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Homo sapiens retinoic acid receptor, alpha Starlite/ChEMBL References
Homo sapiens retinoic acid receptor, gamma Starlite/ChEMBL References
Mus musculus retinoid X receptor gamma Starlite/ChEMBL References
Homo sapiens retinoid X receptor, alpha Starlite/ChEMBL References
Mus musculus retinoid X receptor beta Starlite/ChEMBL References
Homo sapiens retinoic acid receptor, beta Starlite/ChEMBL References

Predicted pathogen targets for this compound

By orthology
Species Potential target Known druggable target/s Ortholog Group
Echinococcus multilocularis retinoic acid receptor rxr beta a retinoic acid receptor rxr alpha a retinoic acid receptor rxr alpha Get druggable targets OG5_130073 All targets in OG5_130073
Onchocerca volvulus Steroid hormone receptor family member cnr14 homolog Get druggable targets OG5_131607 All targets in OG5_131607
Loa Loa (eye worm) nuclear receptor nhr-7B Get druggable targets OG5_131607 All targets in OG5_131607
Echinococcus granulosus retinoic acid receptor rxr beta a Get druggable targets OG5_130073 All targets in OG5_130073
Brugia malayi nuclear hormone receptor Get druggable targets OG5_131607 All targets in OG5_131607
Schistosoma japonicum ko:K08524 nuclear receptor, subfamily 2, group B, member 1, putative Get druggable targets OG5_130073 All targets in OG5_130073
Loa Loa (eye worm) hypothetical protein Get druggable targets OG5_131607 All targets in OG5_131607
Schistosoma mansoni retinoic acid receptor RXR Get druggable targets OG5_130073 All targets in OG5_130073

By sequence similarity to non orthologous known druggable targets
Species Potential target Known druggable target Length Alignment span Identity
Brugia malayi ecdysteroid receptor retinoid X receptor, alpha 435 aa 352 aa 23.9 %
Brugia malayi ecdysteroid receptor retinoid X receptor gamma 340 aa 338 aa 24.6 %

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species
Schistosoma mansoni nuclear hormone receptor 0.0038 0.012 0.018
Schistosoma mansoni nuclear hormone receptor 0.008 0.0634 0.1047
Brugia malayi Corticotropin releasing factor receptor 2 precursor, putative 0.0048 0.0249 0.0249
Loa Loa (eye worm) nuclear hormone receptor family member nhr-49 0.008 0.0634 0.0656
Loa Loa (eye worm) hypothetical protein 0.008 0.0634 0.0656
Brugia malayi latrophilin 2 splice variant baaae 0.0033 0.0063 0.0053
Brugia malayi hypothetical protein 0.0038 0.012 0.0113
Loa Loa (eye worm) nuclear hormone receptor family member nhr-40 0.008 0.0634 0.0656
Onchocerca volvulus 0.0038 0.012 0.0107
Brugia malayi Nuclear hormone receptor family member nhr-14 0.008 0.0634 0.0656
Brugia malayi Nuclear hormone receptor family member nhr-25 0.008 0.0634 0.0656
Echinococcus granulosus hepatocyte nuclear factor 4 alpha 0.008 0.0634 0.1066
Schistosoma mansoni zinc finger protein 0.0038 0.012 0.018
Echinococcus granulosus nuclear receptor subfamily 1 group D 0.0042 0.0175 0.0294
Echinococcus multilocularis FTZ F1 alpha 0.008 0.0634 0.1146
Brugia malayi Nuclear hormone receptor family member nhr-41 0.008 0.0634 0.0656
Loa Loa (eye worm) hypothetical protein 0.0033 0.0063 0.0053
Toxoplasma gondii histone lysine methyltransferase SET/SUV39 0.0029 0.0013 0.5
Echinococcus multilocularis nuclear receptor nhr 48 0.0038 0.012 0.0197
Loa Loa (eye worm) hypothetical protein 0.0042 0.0175 0.0171
Schistosoma mansoni nuclear hormone receptor 0.0038 0.012 0.018
Brugia malayi Nuclear hormone receptor E75 0.0038 0.012 0.0113
Brugia malayi photoreceptor-specific nuclear receptor 0.008 0.0634 0.0656
Brugia malayi Calcitonin receptor-like protein seb-1 0.0048 0.0249 0.0249
Brugia malayi nuclear receptor subfamily 1, group D, member 1, putative 0.0038 0.012 0.0113
Brugia malayi Steroid receptor seven-up type 2 0.008 0.0634 0.0656
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0283 0.3111 1
Loa Loa (eye worm) hypothetical protein 0.0038 0.012 0.0113
Loa Loa (eye worm) hypothetical protein 0.0038 0.012 0.0113
Schistosoma mansoni hepatocyte nuclear factor 4-alpha (hnf-4-alpha) 0.0038 0.012 0.018
Mycobacterium tuberculosis Probable fructose-bisphosphate aldolase Fba 0.0138 0.1346 0.5
Loa Loa (eye worm) hypothetical protein 0.008 0.0634 0.0656
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0283 0.3111 1
Schistosoma mansoni retinoic acid receptor RXR 0.0516 0.5949 1
Echinococcus granulosus FTZ F1 nuclear receptor protein 0.008 0.0634 0.1066
Schistosoma mansoni RAR-like nuclear receptor 0.008 0.0634 0.1047
Schistosoma mansoni retinoid-x-receptor (RXR) 0.008 0.0634 0.1047
Schistosoma mansoni FTZ-F1 nuclear receptor-like protein 0.008 0.0634 0.1047
Brugia malayi Nuclear hormone receptor family member nhr-25 0.008 0.0634 0.0656
Brugia malayi Nuclear hormone receptor-like 1 0.008 0.0634 0.0656
Echinococcus granulosus FTZ F1 alpha 0.008 0.0634 0.1066
Echinococcus multilocularis thyroid hormone receptor alpha 0.008 0.0634 0.1146
Schistosoma mansoni thyroid hormone receptor 0.008 0.0634 0.1047
Brugia malayi steroid hormone receptor 0.008 0.0634 0.0656
Schistosoma mansoni nuclear receptor 2DBD-gamma 0.008 0.0634 0.1047
Echinococcus granulosus ecdysone induced protein 78C 0.008 0.0634 0.1066
Brugia malayi Nuclear hormone receptor family member nhr-40 0.008 0.0634 0.0656
Onchocerca volvulus Protein ultraspiracle homolog 0.008 0.0634 0.0622
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0283 0.3111 1
Loa Loa (eye worm) hypothetical protein 0.0145 0.1424 0.149
Echinococcus multilocularis nuclear receptor 2DBD gamma 0.0038 0.012 0.0197
Echinococcus multilocularis nuclear receptor 2DBD gamma 0.008 0.0634 0.1146
Loa Loa (eye worm) hypothetical protein 0.0042 0.0175 0.0171
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0283 0.3111 1
Schistosoma mansoni nuclear receptor 0.0038 0.012 0.018
Loa Loa (eye worm) hypothetical protein 0.0038 0.012 0.0113
Loa Loa (eye worm) hypothetical protein 0.0038 0.012 0.0113
Loa Loa (eye worm) nuclear hormone receptor family member nhr-14 0.008 0.0634 0.0656
Loa Loa (eye worm) hypothetical protein 0.008 0.0634 0.0656
Brugia malayi hypothetical protein 0.0042 0.0175 0.0171
Echinococcus granulosus Nuclear hormone receptor HR96 0.0038 0.012 0.0202
Echinococcus multilocularis muscleblind protein 0.0145 0.1424 0.2603
Brugia malayi Muscleblind-like protein 0.0145 0.1424 0.149
Entamoeba histolytica fructose-1,6-bisphosphate aldolase, putative 0.0283 0.3111 0.5
Echinococcus granulosus nuclear receptor nhr 48 0.0038 0.012 0.0202
Brugia malayi ecdysteroid receptor 0.008 0.0634 0.0656
Onchocerca volvulus 0.008 0.0634 0.0622
Loa Loa (eye worm) nuclear hormone receptor family member nhr-41 0.008 0.0634 0.0656
Echinococcus multilocularis COUP TF:Svp nuclear hormone receptor 0.008 0.0634 0.1146
Brugia malayi nuclear receptor RXR 0.0038 0.012 0.0113
Brugia malayi orphan nuclear receptor NR2E1 0.0038 0.012 0.0113
Loa Loa (eye worm) hypothetical protein 0.0048 0.0249 0.0249
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0283 0.3111 1
Schistosoma mansoni nuclear receptor nhr-48 0.0038 0.012 0.018
Loa Loa (eye worm) nuclear receptor nhr-7B 0.0807 0.9486 1
Loa Loa (eye worm) hypothetical protein 0.008 0.0634 0.0656
Onchocerca volvulus Bile acid receptor homolog 0.008 0.0634 0.0622
Loa Loa (eye worm) hypothetical protein 0.008 0.0634 0.0656
Brugia malayi nuclear receptor NHR-67 0.0038 0.012 0.0113
Loa Loa (eye worm) hypothetical protein 0.0038 0.012 0.0113
Loa Loa (eye worm) nuclear hormone receptor family member nhr-1 0.008 0.0634 0.0656
Loa Loa (eye worm) pre-SET domain-containing protein family protein 0.0202 0.2117 0.2222
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0283 0.3111 1
Brugia malayi nuclear receptor RXR 0.0042 0.0175 0.0171
Onchocerca volvulus 0.0038 0.012 0.0107
Brugia malayi nuclear hormone receptor 0.0807 0.9486 1
Onchocerca volvulus 0.023 0.2457 0.2447
Schistosoma mansoni photoreceptor-specific nuclear receptor related 0.008 0.0634 0.1047
Loa Loa (eye worm) hypothetical protein 0.0042 0.0175 0.0171
Loa Loa (eye worm) hypothetical protein 0.008 0.0634 0.0656
Echinococcus multilocularis Nuclear hormone receptor HR96 0.0038 0.012 0.0197
Echinococcus multilocularis nuclear receptor subfamily 4 group A 0.0038 0.012 0.0197
Brugia malayi hypothetical protein 0.0038 0.012 0.0113
Schistosoma mansoni ecdysone-induced protein 78c (dr-78) 0.0042 0.0175 0.0273
Loa Loa (eye worm) hypothetical protein 0.0038 0.012 0.0113
Loa Loa (eye worm) hypothetical protein 0.0042 0.0175 0.0171
Echinococcus granulosus COUP TF:Svp nuclear hormone receptor 0.008 0.0634 0.1066
Onchocerca volvulus Nuclear receptor subfamily 6 group A member 1 homolog 0.0038 0.012 0.0107
Loa Loa (eye worm) hypothetical protein 0.0038 0.012 0.0113
Echinococcus multilocularis hepatocyte nuclear factor 4 alpha 0.008 0.0634 0.1146
Brugia malayi Pre-SET motif family protein 0.0202 0.2117 0.2222
Schistosoma mansoni nuclear receptor 0.0038 0.012 0.018
Brugia malayi Nuclear hormone receptor E75 0.0038 0.012 0.0113
Brugia malayi ecdysone receptor 0.0038 0.012 0.0113
Brugia malayi Nuclear hormone receptor family member nhr-1 0.008 0.0634 0.0656
Loa Loa (eye worm) nuclear Hormone Receptor family member 0.008 0.0634 0.0656
Brugia malayi Nuclear hormone receptor family member nhr-3 0.008 0.0634 0.0656
Brugia malayi Nuclear hormone receptor-like 1 0.0042 0.0175 0.0171
Loa Loa (eye worm) hypothetical protein 0.0042 0.0175 0.0171
Loa Loa (eye worm) nuclear hormone receptor 0.0038 0.012 0.0113
Brugia malayi conserved hypotetical protein 0.0038 0.012 0.0113
Schistosoma mansoni retinoid-x-receptor (RXR) 0.0042 0.0175 0.0273
Echinococcus granulosus nuclear receptor 2DBD gamma 0.008 0.0634 0.1066
Echinococcus granulosus histone lysine methyltransferase setb 0.0029 0.0013 0.0022
Echinococcus multilocularis Nuclear hormone receptor family member nhr 41 0.008 0.0634 0.1146
Echinococcus multilocularis FTZ F1 nuclear receptor protein 0.008 0.0634 0.1146
Loa Loa (eye worm) pigment dispersing factor receptor c 0.0048 0.0249 0.0249
Loa Loa (eye worm) hypothetical protein 0.0145 0.1424 0.149
Echinococcus multilocularis nuclear receptor 2DBD gamma 0.008 0.0634 0.1146
Loa Loa (eye worm) nuclear hormone receptor-like 1 0.0042 0.0175 0.0171
Loa Loa (eye worm) hypothetical protein 0.008 0.0634 0.0656
Plasmodium vivax SET domain protein, putative 0.0029 0.0013 0.5
Loa Loa (eye worm) hypothetical protein 0.0038 0.012 0.0113
Brugia malayi Ligand-binding domain of nuclear hormone receptor family protein 0.008 0.0634 0.0656
Loa Loa (eye worm) hypothetical protein 0.0038 0.012 0.0113
Brugia malayi Nuclear hormone receptor family member nhr-19 0.008 0.0634 0.0656
Loa Loa (eye worm) hypothetical protein 0.0038 0.012 0.0113
Loa Loa (eye worm) hypothetical protein 0.0769 0.9026 0.9515
Schistosoma mansoni hypothetical protein 0.0033 0.0063 0.0084
Schistosoma mansoni Tr4/Tr2 (homologue) 0.008 0.0634 0.1047
Schistosoma mansoni nuclear hormone receptor superfamily protein-related 0.0038 0.012 0.018
Entamoeba histolytica fructose-1,6-bisphosphate aldolase, putative 0.0283 0.3111 0.5
Echinococcus granulosus nuclear receptor subfamily 4 group A 0.0038 0.012 0.0202
Loa Loa (eye worm) DR-78 0.0038 0.012 0.0113
Echinococcus granulosus Nuclear hormone receptor family member nhr 41 0.008 0.0634 0.1066
Brugia malayi Nuclear hormone receptor family member nhr-31 0.008 0.0634 0.0656
Brugia malayi Nuclear hormone receptor family member nhr-49 0.008 0.0634 0.0656
Schistosoma mansoni steroid hormone receptor ad4bp 0.008 0.0634 0.1047
Mycobacterium ulcerans fructose-bisphosphate aldolase 0.0138 0.1346 0.5
Echinococcus multilocularis Nuclear hormone receptor HR96 0.0038 0.012 0.0197
Brugia malayi nuclear hormone receptor family member nhr-6 0.0038 0.012 0.0113
Loa Loa (eye worm) hypothetical protein 0.0038 0.012 0.0113
Loa Loa (eye worm) hypothetical protein 0.0038 0.012 0.0113
Treponema pallidum fructose-bisphosphate aldolase 0.0283 0.3111 0.5
Echinococcus granulosus retinoic acid receptor rxr beta a 0.0516 0.5949 1
Schistosoma mansoni coup transcription factor 0.008 0.0634 0.1047
Onchocerca volvulus Nuclear receptor subfamily 6 group A member 1 homolog 0.0038 0.012 0.0107
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0283 0.3111 1
Loa Loa (eye worm) hypothetical protein 0.0038 0.012 0.0113
Echinococcus multilocularis ecdysone induced protein 78C 0.008 0.0634 0.1146
Loa Loa (eye worm) hypothetical protein 0.008 0.0634 0.0656
Brugia malayi hypothetical protein 0.0042 0.0175 0.0171
Brugia malayi Ligand-binding domain of nuclear hormone receptor family protein 0.008 0.0634 0.0656
Brugia malayi nuclear receptor NHR-88 0.0038 0.012 0.0113
Echinococcus granulosus thyroid hormone receptor alpha 0.0038 0.012 0.0202
Echinococcus granulosus nuclear receptor 2DBD gamma 0.008 0.0634 0.1066
Schistosoma mansoni thyroid hormone receptor 0.008 0.0634 0.1047
Schistosoma mansoni nuclear hormone receptor nor-1/nor-2 0.008 0.0634 0.1047
Echinococcus multilocularis nuclear receptor subfamily 1 group D 0.0042 0.0175 0.0299
Echinococcus granulosus nuclear receptor 2DBD gamma 0.0038 0.012 0.0202
Giardia lamblia Fructose-bisphosphate aldolase 0.0283 0.3111 0.5
Brugia malayi nuclear hormone receptor family member odr-7 0.0038 0.012 0.0113
Echinococcus multilocularis retinoic acid receptor rxr beta a retinoic acid receptor rxr alpha a retinoic acid receptor rxr alpha 0.0474 0.5435 1
Brugia malayi nuclear hormone receptor 0.008 0.0634 0.0656
Brugia malayi Nuclear hormone receptor family member nhr-19 0.008 0.0634 0.0656
Brugia malayi tailless protein 0.0038 0.012 0.0113
Loa Loa (eye worm) steroid hormone receptor 0.008 0.0634 0.0656
Loa Loa (eye worm) nuclear hormone receptor family member nhr-31 0.008 0.0634 0.0656
Loa Loa (eye worm) nuclear receptor NHR-67 0.0038 0.012 0.0113
Echinococcus granulosus muscleblind protein 0.0145 0.1424 0.2394
Echinococcus multilocularis muscleblind protein 1 0.0145 0.1424 0.2603
Echinococcus granulosus Nuclear hormone receptor HR96 0.0038 0.012 0.0202
Brugia malayi Nuclear hormone receptor-like 1 0.0042 0.0175 0.0171
Brugia malayi nuclear receptor NHR-88 0.008 0.0634 0.0656
Mycobacterium leprae Probable fructose bisphosphate aldolase Fba 0.0138 0.1346 0.5
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0283 0.3111 1

Activities

Activity type Activity value Assay description Source Reference
EC50 (binding) = 395 nM Effective concentration against retinoid receptor isoform (RAR beta) expressed in CV-1 cells ChEMBL. 8071941
EC50 (binding) = 395 nM Effective concentration against retinoid receptor isoform (RAR beta) expressed in CV-1 cells ChEMBL. 8071941
EC50 (binding) = 1016 nM Effective concentration against retinoid receptor isoform (RAR gamma) expressed in CV-1 cells ChEMBL. 8071941
EC50 (binding) = 1016 nM Effective concentration against retinoid receptor isoform (RAR gamma) expressed in CV-1 cells ChEMBL. 8071941
EC50 (binding) = 1820 nM Effective concentration against retinoid receptor isoform (RXR alpha) expressed in CV-1 cells ChEMBL. 8071941
EC50 (binding) = 1820 nM Effective concentration against retinoid receptor isoform (RXR alpha) expressed in CV-1 cells ChEMBL. 8071941
EC50 (binding) = 1976 nM Effective concentration against retinoid receptor isoform (RXR beta) expressed in CV-1 cells ChEMBL. 8071941
EC50 (binding) = 1976 nM Effective concentration against retinoid receptor isoform (RXR beta) expressed in CV-1 cells ChEMBL. 8071941
EC50 (binding) = 2246 nM Effective concentration against retinoid receptor isoform (RXR gamma) expressed in CV-1 cells ChEMBL. 8071941
EC50 (binding) = 2246 nM Effective concentration against retinoid receptor isoform (RXR gamma) expressed in CV-1 cells ChEMBL. 8071941
EC50 (binding) = 2856 nM Effective concentration against retinoid receptor isoform (RAR alpha) expressed in CV-1 cells ChEMBL. 8071941
EC50 (binding) = 2856 nM Effective concentration against retinoid receptor isoform (RAR alpha) expressed in CV-1 cells ChEMBL. 8071941
Kd (binding) = 706 nM Inhibition of [3H]-9-cis-RA binding to baculovirus expressed retinoid receptor RXR alpha ChEMBL. 8071941
Kd (binding) = 706 nM Inhibition of [3H]-9-cis-RA binding to baculovirus expressed retinoid receptor RXR alpha ChEMBL. 8071941
Kd (binding) = 902 nM Inhibition of [3H]-9-cis-RA binding to baculovirus expressed retinoid receptor RXR beta ChEMBL. 8071941
Kd (binding) = 902 nM Inhibition of [3H]-9-cis-RA binding to baculovirus expressed retinoid receptor RXR beta ChEMBL. 8071941
Kd (binding) = 911 nM Inhibition of [3H]-9-cis-RA binding to baculovirus expressed retinoid receptor RXR gamma ChEMBL. 8071941
Kd (binding) = 911 nM Inhibition of [3H]-9-cis-RA binding to baculovirus expressed retinoid receptor RXR gamma ChEMBL. 8071941
Kd (binding) > 1000 nM Inhibition of [3H]-ATRA binding to baculovirus expressed retinoid receptor RAR alpha ChEMBL. 8071941
Kd (binding) > 1000 nM Inhibition of [3H]-ATRA binding to baculovirus expressed retinoid receptor RAR beta ChEMBL. 8071941
Kd (binding) > 1000 nM Tested for binding affinity against [3H]-ATRA binding to retinoid receptor isoform (RAR gamma) expressed in baculovirus ChEMBL. 8071941
Kd (binding) > 1000 nM Inhibition of [3H]-ATRA binding to baculovirus expressed retinoid receptor RAR alpha ChEMBL. 8071941
Kd (binding) > 1000 nM Inhibition of [3H]-ATRA binding to baculovirus expressed retinoid receptor RAR beta ChEMBL. 8071941
Kd (binding) > 1000 nM Tested for binding affinity against [3H]-ATRA binding to retinoid receptor isoform (RAR gamma) expressed in baculovirus ChEMBL. 8071941

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

1 literature reference was collected for this gene.

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