Detailed information for compound 1842675

Basic information

Technical information
  • Name: Unnamed compound
  • MW: 459.44 | Formula: C23H28N2O3Se
  • H donors: 0 H acceptors: 1 LogP: 3.79 Rotable bonds: 7
    Rule of 5 violations (Lipinski): 1
  • SMILES: COc1cc2c(cc1OC)[se]n(c2=O)CCC1CCN(CC1)Cc1ccccc1
  • InChi: 1S/C23H28N2O3Se/c1-27-20-14-19-22(15-21(20)28-2)29-25(23(19)26)13-10-17-8-11-24(12-9-17)16-18-6-4-3-5-7-18/h3-7,14-15,17H,8-13,16H2,1-2H3
  • InChiKey: PGBBHNPZVCTISZ-UHFFFAOYSA-N  

Network

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Synonyms

No synonyms found for this compound

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Equus caballus Cholinesterase Starlite/ChEMBL References
Electrophorus electricus Acetylcholinesterase Starlite/ChEMBL References
Homo sapiens acetylcholinesterase (Yt blood group) Starlite/ChEMBL References

Predicted pathogen targets for this compound

By orthology
Species Potential target Known druggable target/s Ortholog Group
Echinococcus granulosus carboxylesterase 5A Get druggable targets OG5_126875 All targets in OG5_126875
Echinococcus multilocularis acetylcholinesterase Get druggable targets OG5_126875 All targets in OG5_126875
Loa Loa (eye worm) acetylcholinesterase 1 Get druggable targets OG5_126875 All targets in OG5_126875
Echinococcus granulosus acetylcholinesterase Get druggable targets OG5_126875 All targets in OG5_126875
Loa Loa (eye worm) carboxylesterase Get druggable targets OG5_126875 All targets in OG5_126875
Brugia malayi Carboxylesterase family protein Get druggable targets OG5_126875 All targets in OG5_126875
Brugia malayi Carboxylesterase family protein Get druggable targets OG5_126875 All targets in OG5_126875
Schistosoma japonicum ko:K01049 acetylcholinesterase [EC3.1.1.7], putative Get druggable targets OG5_126875 All targets in OG5_126875
Echinococcus multilocularis carboxylesterase 5A Get druggable targets OG5_126875 All targets in OG5_126875
Schistosoma mansoni family S9 non-peptidase homologue (S09 family) Get druggable targets OG5_126875 All targets in OG5_126875
Schistosoma japonicum Acetylcholinesterase 1 precursor, putative Get druggable targets OG5_126875 All targets in OG5_126875
Loa Loa (eye worm) hypothetical protein Get druggable targets OG5_126875 All targets in OG5_126875
Loa Loa (eye worm) hypothetical protein Get druggable targets OG5_126875 All targets in OG5_126875
Echinococcus multilocularis acetylcholinesterase Get druggable targets OG5_126875 All targets in OG5_126875
Echinococcus granulosus acetylcholinesterase Get druggable targets OG5_126875 All targets in OG5_126875

By sequence similarity to non orthologous known druggable targets
Species Potential target Known druggable target Length Alignment span Identity
Onchocerca volvulus Galectin homolog Cholinesterase   574 aa 531 aa 39.7 %
Brugia malayi Carboxylesterase family protein Cholinesterase   574 aa 538 aa 31.4 %
Echinococcus granulosus neuroligin Cholinesterase   574 aa 492 aa 24.4 %
Schistosoma mansoni family S9 non-peptidase homologue (S09 family) Acetylcholinesterase   633 aa 622 aa 24.9 %
Brugia malayi Carboxylesterase family protein acetylcholinesterase (Yt blood group) 614 aa 510 aa 26.5 %
Loa Loa (eye worm) hypothetical protein Acetylcholinesterase   633 aa 597 aa 25.1 %
Schistosoma mansoni gliotactin Cholinesterase   574 aa 587 aa 27.9 %
Onchocerca volvulus Acetylcholinesterase   633 aa 648 aa 25.3 %
Onchocerca volvulus Cholinesterase   574 aa 551 aa 29.9 %
Echinococcus multilocularis BC026374 protein (S09 family) Acetylcholinesterase   633 aa 690 aa 32.3 %
Onchocerca volvulus Molybdopterin synthase catalytic subunit homolog Acetylcholinesterase   633 aa 576 aa 28.8 %
Onchocerca volvulus Carnitine O-palmitoyltransferase 2, mitochondrial homolog Cholinesterase   574 aa 554 aa 36.1 %
Onchocerca volvulus Cholinesterase   574 aa 578 aa 25.3 %
Onchocerca volvulus Putative nuclear protein Cholinesterase   574 aa 572 aa 40.9 %
Loa Loa (eye worm) hypothetical protein Acetylcholinesterase   633 aa 576 aa 23.4 %
Brugia malayi Carboxylesterase family protein Acetylcholinesterase   633 aa 620 aa 28.4 %
Echinococcus multilocularis neuroligin Acetylcholinesterase   633 aa 507 aa 23.9 %
Echinococcus granulosus BC026374 protein S09 family Acetylcholinesterase   633 aa 690 aa 31.7 %
Brugia malayi Carboxylesterase family protein Acetylcholinesterase   633 aa 517 aa 25.1 %
Schistosoma japonicum ko:K01050 cholinesterase [EC3.1.1.8], putative Cholinesterase   574 aa 577 aa 36.9 %
Drosophila melanogaster CG10175 gene product from transcript CG10175-RE Acetylcholinesterase   633 aa 549 aa 30.4 %

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species
Loa Loa (eye worm) hypothetical protein 0.0041 0.1441 0.1431
Trypanosoma brucei DNA polymerase kappa, putative 0.0032 0.1048 0.2682
Mycobacterium tuberculosis Carboxylesterase LipT 0.0041 0.1441 1
Plasmodium vivax 5'-3' exonuclease, N-terminal resolvase-like domain, putative 0.0015 0.032 1
Trichomonas vaginalis DNA helicase recq, putative 0.0015 0.031 0.0268
Schistosoma mansoni DNA helicase recq1 0.0015 0.031 0.031
Loa Loa (eye worm) hypothetical protein 0.0015 0.031 0.0299
Trypanosoma cruzi apurinic/apyrimidinic endonuclease 0.0014 0.0279 0.0701
Trypanosoma brucei ATP-dependent DEAD/H DNA helicase recQ, putative 0.0015 0.031 0.0741
Echinococcus granulosus neuroligin 0.0041 0.1441 0.1288
Echinococcus multilocularis bloom syndrome protein 0.0015 0.031 0.0137
Brugia malayi Carboxylesterase family protein 0.0041 0.1441 0.1288
Trypanosoma brucei DNA polymerase kappa, putative 0.0016 0.0392 0.0957
Trichomonas vaginalis DNA polymerase IV / kappa, putative 0.0032 0.1048 0.6616
Loa Loa (eye worm) hypothetical protein 0.0024 0.0721 0.071
Schistosoma mansoni family S9 non-peptidase homologue (S09 family) 0.0041 0.1441 0.1441
Entamoeba histolytica tyrosyl-DNA phosphodiesterase, putative 0.0098 0.383 1
Entamoeba histolytica recQ family helicase, putative 0.0015 0.031 0.0811
Leishmania major ATP-dependent DEAD/H DNA helicase recQ, putative 0.0015 0.031 0.0368
Loa Loa (eye worm) hypothetical protein 0.0246 1 1
Leishmania major mitochondrial structure specific endonuclease I (SSE-1), putative 0.0015 0.032 0.0395
Echinococcus multilocularis DNA (apurinic or apyrimidinic site) lyase 0.0014 0.0279 0.0105
Trichomonas vaginalis DNA helicase recq1, putative 0.0015 0.031 0.0268
Echinococcus multilocularis ATP dependent DNA helicase Q5 0.0015 0.031 0.0137
Mycobacterium tuberculosis POSSIBLE PARA-NITROBENZYL ESTERASE (FRAGMENT) 0.0041 0.1441 1
Plasmodium falciparum ATP-dependent DNA helicase Q1 0.0015 0.031 0.757
Trypanosoma cruzi tyrosyl-DNA Phosphodiesterase (Tdp1), putative 0.0098 0.383 1
Trypanosoma cruzi ATP-dependent DEAD/H DNA helicase recQ, putative 0.0015 0.031 0.0782
Brugia malayi hypothetical protein 0.0041 0.1441 0.1288
Schistosoma mansoni DNA polymerase eta 0.0011 0.0176 0.0176
Echinococcus granulosus BC026374 protein S09 family 0.0041 0.1441 0.1288
Loa Loa (eye worm) RecQ helicase 0.0015 0.031 0.0299
Plasmodium falciparum 5'-3' exonuclease, N-terminal resolvase-like domain, putative 0.0015 0.032 1
Echinococcus granulosus para nitrobenzyl esterase 0.0041 0.1441 0.1288
Trypanosoma brucei DNA polymerase eta, putative 0.0011 0.0176 0.0388
Leishmania major apurinic/apyrimidinic endonuclease-redox protein 0.0014 0.0279 0.0283
Plasmodium vivax ADP-dependent DNA helicase RecQ, putative 0.0007 0.0012 0.0369
Mycobacterium leprae PROBABLE DNA POLYMERASE I POLA 0.0021 0.0573 0.5
Mycobacterium ulcerans 5'-3' exonuclease 0.0015 0.032 0.0354
Treponema pallidum DNA polymerase I (polA) 0.0021 0.0573 1
Echinococcus multilocularis family S9 non peptidase ue (S09 family) 0.0041 0.1441 0.1288
Loa Loa (eye worm) hypothetical protein 0.0041 0.1441 0.1431
Brugia malayi Carboxylesterase family protein 0.0246 1 1
Trypanosoma brucei unspecified product 0.0027 0.0832 0.2113
Trypanosoma brucei DNA polymerase IV, putative 0.0032 0.1048 0.2682
Trypanosoma brucei apurinic/apyrimidinic endonuclease, putative 0.0014 0.0279 0.0659
Echinococcus granulosus tyrosyl DNA phosphodiesterase 1 0.0098 0.383 0.372
Entamoeba histolytica exodeoxyribonuclease III, putative 0.0014 0.0279 0.0729
Schistosoma mansoni gliotactin 0.0041 0.1441 0.1441
Schistosoma mansoni family S9 non-peptidase homologue (S09 family) 0.0246 1 1
Trypanosoma cruzi DNA polymerase eta, putative 0.0011 0.0176 0.043
Trypanosoma cruzi mitochondrial structure specific endonuclease I (SSE-1), putative 0.0015 0.032 0.0808
Trypanosoma brucei DNA polymerase kappa, putative 0.0032 0.1048 0.2682
Schistosoma mansoni neuroligin 3 (S09 family) 0.0041 0.1441 0.1441
Echinococcus granulosus transcription factor Dp 1 0.0057 0.2091 0.195
Schistosoma mansoni terminal deoxycytidyl transferase 0.0011 0.0176 0.0176
Trypanosoma brucei DNA polymerase kappa, putative 0.0032 0.1048 0.2682
Echinococcus multilocularis acetylcholinesterase 0.0246 1 1
Trichomonas vaginalis DNA helicase recq, putative 0.0015 0.031 0.0268
Loa Loa (eye worm) ImpB/MucB/SamB family protein 0.0011 0.0176 0.0164
Mycobacterium ulcerans DNA polymerase IV 0.0032 0.1048 0.6616
Schistosoma mansoni blooms syndrome DNA helicase 0.0007 0.0012 0.0012
Mycobacterium tuberculosis Probable 5'-3' exonuclease 0.0015 0.032 0.1141
Chlamydia trachomatis DNA polymerase I 0.0021 0.0573 0.5
Onchocerca volvulus 0.0041 0.1441 0.5
Leishmania major tyrosyl-DNA phosphodiesterase 1 0.0098 0.383 1
Toxoplasma gondii 5'-3' exonuclease, N-terminal resolvase family domain-containing protein 0.0007 0.0005 0.0149
Loa Loa (eye worm) hypothetical protein 0.0007 0.0012 0.00000000025146
Brugia malayi Carboxylesterase family protein 0.0041 0.1441 0.1288
Brugia malayi ATP-dependent DNA helicase, RecQ family protein 0.0015 0.031 0.0137
Mycobacterium tuberculosis Probable exodeoxyribonuclease III protein XthA (exonuclease III) (EXO III) (AP endonuclease VI) 0.0014 0.0279 0.0816
Brugia malayi ATP-dependent DNA helicase, RecQ family protein 0.0015 0.031 0.0137
Giardia lamblia Sgs1 DNA helicase, putative 0.0015 0.031 0.2751
Schistosoma mansoni BC026374 protein (S09 family) 0.0041 0.1441 0.1441
Trypanosoma cruzi DNA polymerase kappa, putative 0.0032 0.1048 0.2714
Loa Loa (eye worm) carboxylesterase 0.0041 0.1441 0.1431
Trypanosoma brucei DNA polymerase kappa, putative 0.0032 0.1048 0.2682
Echinococcus granulosus ATP dependent DNA helicase Q1 0.0015 0.031 0.0137
Loa Loa (eye worm) hypothetical protein 0.0041 0.1441 0.1431
Trypanosoma brucei DNA polymerase IV, putative 0.0032 0.1048 0.2682
Trypanosoma brucei mitochondrial structure specific endonuclease I (SSE-1), putative 0.0015 0.032 0.0767
Trypanosoma cruzi tyrosyl-DNA Phosphodiesterase (Tdp1), putative 0.0098 0.383 1
Loa Loa (eye worm) acetylcholinesterase 1 0.0246 1 1
Trichomonas vaginalis carboxylesterase domain containing protein, putative 0.0041 0.1441 1
Echinococcus multilocularis carboxylesterase 5A 0.0246 1 1
Loa Loa (eye worm) hypothetical protein 0.0011 0.0176 0.0164
Brugia malayi Carboxylesterase family protein 0.0041 0.1441 0.1288
Toxoplasma gondii ATP-dependent DNA helicase, RecQ family protein 0.0015 0.031 1
Schistosoma mansoni family S9 non-peptidase homologue (S09 family) 0.0041 0.1441 0.1441
Toxoplasma gondii exonuclease III APE 0.0014 0.0279 0.8998
Echinococcus multilocularis BC026374 protein (S09 family) 0.0041 0.1441 0.1288
Trypanosoma brucei DNA polymerase kappa, putative 0.0013 0.0245 0.0569
Toxoplasma gondii ATP-dependent DNA helicase, RecQ family protein 0.0015 0.031 1
Trypanosoma brucei DNA polymerase kappa, putative 0.0013 0.0245 0.0569
Brugia malayi Carboxylesterase family protein 0.0041 0.1441 0.1288
Mycobacterium ulcerans DNA polymerase I 0.0021 0.0573 0.2525
Echinococcus granulosus acetylcholinesterase 0.0246 1 1
Trypanosoma brucei DNA polymerase kappa, putative 0.0024 0.0721 0.1821
Echinococcus granulosus carboxylesterase 5A 0.0246 1 1
Echinococcus granulosus acetylcholinesterase 0.0246 1 1
Mycobacterium ulcerans carboxylesterase, LipT 0.0041 0.1441 1
Echinococcus multilocularis para nitrobenzyl esterase 0.0041 0.1441 0.1288
Echinococcus granulosus dna polymerase kappa 0.0032 0.1048 0.0888
Wolbachia endosymbiont of Brugia malayi DNA polymerase I 0.0021 0.0573 1
Onchocerca volvulus 0.0041 0.1441 0.5
Echinococcus multilocularis dna polymerase kappa 0.0032 0.1048 0.0888
Mycobacterium tuberculosis Possible DNA-damage-inducible protein P DinP (DNA polymerase V) (pol IV 2) (DNA nucleotidyltransferase (DNA-directed)) 0.0016 0.0392 0.171
Trypanosoma brucei DNA polymerase kappa, putative 0.0032 0.1048 0.2682
Trypanosoma cruzi DNA polymerase kappa, putative 0.0032 0.1048 0.2714
Loa Loa (eye worm) carboxylesterase 0.0041 0.1441 0.1431
Loa Loa (eye worm) hypothetical protein 0.0041 0.1441 0.1431
Giardia lamblia DINP protein human, muc B family 0.0016 0.0392 1
Trypanosoma cruzi DNA polymerase kappa, putative 0.0032 0.1048 0.2714
Treponema pallidum exodeoxyribonuclease (exoA) 0.0014 0.0279 0.477
Schistosoma mansoni acetylcholinesterase 0.0041 0.1441 0.1441
Mycobacterium tuberculosis Probable DNA polymerase I PolA 0.0021 0.0573 0.3135
Trypanosoma brucei DNA polymerase kappa, putative 0.0032 0.1048 0.2682
Echinococcus granulosus family S9 non peptidase ue S09 family 0.0041 0.1441 0.1288
Echinococcus granulosus bloom syndrome protein 0.0015 0.031 0.0137
Echinococcus granulosus DNA apurinic or apyrimidinic site lyase 0.0014 0.0279 0.0105
Trypanosoma brucei DNA polymerase IV, putative 0.0027 0.0832 0.2113
Loa Loa (eye worm) hypothetical protein 0.0041 0.1441 0.1431
Toxoplasma gondii BRCA1 C Terminus (BRCT) domain-containing protein 0.0009 0.0065 0.2096
Loa Loa (eye worm) ATP-dependent DNA helicase 0.0015 0.031 0.0299
Trypanosoma cruzi DNA polymerase kappa, putative 0.0032 0.1048 0.2714
Leishmania major DNA polymerase kappa, putative,DNA polymerase IV, putative 0.0016 0.0392 0.0592
Schistosoma mansoni ap endonuclease 0.0014 0.0279 0.0279
Plasmodium vivax AP endonuclease (DNA-[apurinic or apyrimidinic site] lyase), putative 0.0014 0.0279 0.8718
Trypanosoma cruzi mitochondrial structure specific endonuclease I (SSE-1), putative 0.0015 0.032 0.0808
Schistosoma mansoni DNA helicase recq5 0.0015 0.031 0.031
Trypanosoma brucei DNA polymerase kappa, putative 0.0032 0.1048 0.2682
Trypanosoma brucei DNA polymerase kappa, putative 0.0024 0.0721 0.1821
Entamoeba histolytica recQ family DNA helicase 0.0007 0.0012 0.0031
Loa Loa (eye worm) tyrosyl-DNA phosphodiesterase 0.0098 0.383 0.3823
Brugia malayi exodeoxyribonuclease III family protein 0.0014 0.0279 0.0105
Leishmania major DNA polymerase kappa, putative 0.0016 0.0392 0.0592
Brugia malayi Tyrosyl-DNA phosphodiesterase family protein 0.0098 0.383 0.372
Schistosoma mansoni ap endonuclease 0.0014 0.0279 0.0279
Mycobacterium tuberculosis POSSIBLE PARA-NITROBENZYL ESTERASE (FRAGMENT) 0.0041 0.1441 1
Loa Loa (eye worm) exodeoxyribonuclease III family protein 0.0014 0.0279 0.0268
Mycobacterium ulcerans DNA polymerase IV 0.0032 0.1048 0.6616
Entamoeba histolytica deoxycytidyl transferase, putative 0.0011 0.0176 0.046
Onchocerca volvulus 0.0041 0.1441 0.5
Brugia malayi polk-prov protein 0.0024 0.0721 0.0555
Trypanosoma cruzi apurinic/apyrimidinic endonuclease, putative 0.0014 0.0279 0.0701
Loa Loa (eye worm) hypothetical protein 0.0041 0.1441 0.1431
Echinococcus multilocularis acetylcholinesterase 0.0246 1 1
Schistosoma mansoni tyrosyl-DNA phosphodiesterase 0.0098 0.383 0.383
Loa Loa (eye worm) carboxylesterase 0.0246 1 1
Onchocerca volvulus 0.0041 0.1441 0.5
Trypanosoma brucei DNA polymerase kappa, putative 0.0032 0.1048 0.2682
Loa Loa (eye worm) hypothetical protein 0.0246 1 1
Trichomonas vaginalis DNA polymerase eta, putative 0.0032 0.1048 0.6616
Schistosoma mansoni family S9 non-peptidase homologue (S09 family) 0.0041 0.1441 0.1441
Loa Loa (eye worm) hypothetical protein 0.0041 0.1441 0.1431
Schistosoma mansoni rab geranylgeranyl transferase alpha subunit 0.0011 0.0176 0.0176
Trypanosoma brucei tyrosyl-DNA Phosphodiesterase (Tdp1), putative 0.0098 0.383 1
Echinococcus granulosus ATP dependent DNA helicase Q5 0.0015 0.031 0.0137
Plasmodium falciparum ADP-dependent DNA helicase RecQ 0.0015 0.031 0.757
Echinococcus multilocularis tyrosyl DNA phosphodiesterase 1 0.0098 0.383 0.372
Brugia malayi Bloom's syndrome protein homolog 0.0015 0.031 0.0137
Trypanosoma brucei DNA polymerase kappa, putative 0.0032 0.1048 0.2682
Onchocerca volvulus 0.0041 0.1441 0.5
Echinococcus multilocularis ATP dependent DNA helicase Q1 0.0015 0.031 0.0137
Trypanosoma brucei DNA polymerase kappa, putative 0.0013 0.0245 0.0569
Echinococcus multilocularis neuroligin 0.0041 0.1441 0.1288
Echinococcus multilocularis transcription factor Dp 1 0.0057 0.2091 0.195
Trichomonas vaginalis spcc417.12 protein, putative 0.0041 0.1441 1
Toxoplasma gondii ATP-dependent DNA helicase, RecQ family protein 0.0007 0.0012 0.0381

Activities

Activity type Activity value Assay description Source Reference
IC50 (binding) = 0.042 uM Inhibition of electric eel AChE using acetylthiocholine chloride as substrate preincubated for 15 mins followed by substrate addition measured every 1 min by Ellman's method ChEMBL. 24160297
IC50 (binding) = 0.097 uM Inhibition of human erythrocyte AChE using acetylthiocholine chloride as substrate preincubated for 15 mins followed by substrate addition measured every 1 min by Ellman's method ChEMBL. 24160297
IC50 (binding) = 1.586 uM Inhibition of equine serum BuChE using butyrylthiocholine chloride as substrate preincubated for 15 mins followed by substrate addition measured every 1 min by Ellman's method ChEMBL. 24160297
Inhibition (binding) Mixed-type inhibition of electric eel AChE using acetylthiocholine chloride as substrate preincubated for 15 mins followed by substrate addition by Lineweaver-Burk plot analysis ChEMBL. 24160297
Inhibition (binding) = 21.4 % Inhibition of human recombinant AChE-induced amyloid beta (1 to 40) aggregation at 100 uM after 48 hrs by thioflavin T fluorescence assay relative to control ChEMBL. 24160297
Ki (binding) = 0.017 uM Competitive inhibition of electric eel AChE using acetylthiocholine chloride as substrate preincubated for 15 mins followed by substrate addition by Lineweaver-Burk plot analysis ChEMBL. 24160297
MTD (ADMET) = 2000 mg kg-1 Acute toxicity in po dosed KM mouse measured for 14 days ChEMBL. 24160297

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

1 literature reference was collected for this gene.

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