Detailed information for compound 230321

Basic information

Technical information
  • TDR Targets ID: 230321
  • Name: 2-(3-butoxyphenyl)-6-methylchromen-4-one
  • MW: 308.371 | Formula: C20H20O3
  • H donors: 0 H acceptors: 1 LogP: 4.77 Rotable bonds: 5
    Rule of 5 violations (Lipinski): 1
  • SMILES: CCCCOc1cccc(c1)c1cc(=O)c2c(o1)ccc(c2)C
  • InChi: 1S/C20H20O3/c1-3-4-10-22-16-7-5-6-15(12-16)20-13-18(21)17-11-14(2)8-9-19(17)23-20/h5-9,11-13H,3-4,10H2,1-2H3
  • InChiKey: CFRCJBWAEQSCHB-UHFFFAOYSA-N  

Network

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Synonyms

  • 2-(3-butoxyphenyl)-6-methyl-chromen-4-one
  • 2-(3-butoxyphenyl)-6-methyl-1-benzopyran-4-one
  • 2-(3-butoxyphenyl)-6-methyl-chromone
  • 2-(3-butoxyphenyl)-6-methyl-4-chromenone

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Rattus norvegicus GABA-A receptor; anion channel Starlite/ChEMBL References

Predicted pathogen targets for this compound

By orthology
No druggable targets predicted by orthology data
By sequence similarity to non orthologous known druggable targets
Species Potential target Known druggable target Length Alignment span Identity
Onchocerca volvulus Eukaryotic initiation factor 4A-III homolog GABA-A receptor; anion channel   467 aa 453 aa 26.9 %
Onchocerca volvulus GABA-A receptor; anion channel   467 aa 434 aa 26.7 %
Onchocerca volvulus Acetylcholine receptor subunit alpha-type homolog GABA-A receptor; anion channel   467 aa 418 aa 19.6 %
Brugia malayi Cation transporter family protein GABA-A receptor; anion channel   467 aa 453 aa 28.5 %
Loa Loa (eye worm) hypothetical protein GABA-A receptor; anion channel   467 aa 461 aa 27.8 %
Brugia malayi nicotinic acetylcholine receptor alpha subunit, putative GABA-A receptor; anion channel   467 aa 384 aa 19.5 %
Schistosoma mansoni Cys-loop ligand gated ion channel subunit GABA-A receptor; anion channel   467 aa 479 aa 29.2 %
Loa Loa (eye worm) hypothetical protein GABA-A receptor; anion channel   467 aa 441 aa 33.8 %
Brugia malayi Neurotransmitter-gated ion-channel ligand binding domain containing protein GABA-A receptor; anion channel   467 aa 454 aa 29.5 %
Loa Loa (eye worm) hypothetical protein GABA-A receptor; anion channel   467 aa 446 aa 29.1 %
Onchocerca volvulus GABA-A receptor; anion channel   467 aa 446 aa 28.0 %
Echinococcus granulosus glycine receptor subunit alpha 1 GABA-A receptor; anion channel   467 aa 430 aa 32.3 %
Loa Loa (eye worm) nicotinic acetylcholine receptor alpha subunit GABA-A receptor; anion channel   467 aa 379 aa 19.3 %
Onchocerca volvulus Large subunit GTPase 1 homolog GABA-A receptor; anion channel   467 aa 496 aa 26.0 %
Brugia malayi Neurotransmitter-gated ion-channel ligand binding domain containing protein GABA-A receptor; anion channel   467 aa 375 aa 21.9 %
Onchocerca volvulus GABA-A receptor; anion channel   467 aa 468 aa 28.6 %
Onchocerca volvulus GABA-A receptor; anion channel   467 aa 435 aa 29.7 %
Onchocerca volvulus Gamma-aminobutyric acid receptor subunit beta homolog GABA-A receptor; anion channel   467 aa 433 aa 34.6 %
Onchocerca volvulus GABA-A receptor; anion channel   467 aa 454 aa 30.4 %
Echinococcus multilocularis glycine receptor subunit beta GABA-A receptor; anion channel   467 aa 478 aa 28.7 %
Echinococcus granulosus glycine receptor subunit beta GABA-A receptor; anion channel   467 aa 439 aa 29.6 %
Loa Loa (eye worm) hypothetical protein GABA-A receptor; anion channel   467 aa 494 aa 25.5 %
Echinococcus multilocularis glycine receptor subunit alpha 1 GABA-A receptor; anion channel   467 aa 430 aa 32.3 %
Onchocerca volvulus GABA-A receptor; anion channel   467 aa 447 aa 25.7 %

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species
Trichomonas vaginalis conserved hypothetical protein 0.0164 0.1343 1
Treponema pallidum folylpolyglutamate synthetase (folC) 0.0114 0 0.5
Schistosoma mansoni bifunctional dihydrofolate reductase-thymidylate synthase 0.0346 0.6119 0.8547
Toxoplasma gondii bifunctional dihydrofolate reductase-thymidylate synthase 0.0493 1 1
Mycobacterium leprae PROBABLE THYMIDYLATE SYNTHASE THYA (TS) (TSASE) 0.0346 0.6119 0.8547
Brugia malayi Dihydrofolate reductase 0.0385 0.7159 1
Onchocerca volvulus 0.0346 0.6119 1
Mycobacterium leprae DIHYDROFOLATE REDUCTASE DFRA (DHFR) (TETRAHYDROFOLATE DEHYDROGENASE) 0.0385 0.7159 1
Plasmodium falciparum bifunctional dihydrofolate reductase-thymidylate synthase 0.0493 1 1
Mycobacterium tuberculosis Hypothetical protein 0.0164 0.1343 0.1875
Echinococcus granulosus dihydrofolate reductase 0.0385 0.7159 1
Mycobacterium ulcerans dihydrofolate reductase DfrA 0.0385 0.7159 1
Trypanosoma brucei dihydrofolate reductase-thymidylate synthase 0.0493 1 1
Trypanosoma cruzi dihydrofolate reductase-thymidylate synthase 0.0493 1 1
Echinococcus multilocularis thymidylate synthase 0.0346 0.6119 0.8547
Mycobacterium ulcerans thymidylate synthase 0.0346 0.6119 0.8547
Mycobacterium tuberculosis Probable thymidylate synthase ThyA (ts) (TSASE) 0.0346 0.6119 0.8547
Loa Loa (eye worm) thymidylate synthase 0.0346 0.6119 0.8547
Brugia malayi thymidylate synthase 0.0346 0.6119 0.8547
Mycobacterium tuberculosis Dihydrofolate reductase DfrA (DHFR) (tetrahydrofolate dehydrogenase) 0.0385 0.7159 1
Brugia malayi hypothetical protein 0.0164 0.1343 0.1875
Echinococcus multilocularis dihydrofolate reductase 0.0385 0.7159 1
Chlamydia trachomatis dihydrofolate reductase 0.0385 0.7159 0.5
Echinococcus granulosus thymidylate synthase 0.0346 0.6119 0.8547
Trypanosoma cruzi dihydrofolate reductase-thymidylate synthase, putative 0.0164 0.1343 0.1343
Loa Loa (eye worm) dihydrofolate reductase 0.0385 0.7159 1
Plasmodium vivax bifunctional dihydrofolate reductase-thymidylate synthase, putative 0.0493 1 1
Brugia malayi dihydrofolate reductase family protein 0.0385 0.7159 1
Schistosoma mansoni dihydrofolate reductase 0.0385 0.7159 1

Activities

Activity type Activity value Assay description Source Reference
Ki (binding) = 710 nM Ability to inhibit [3H]-Ro- 15-1788 binding to Gamma-aminobutyric-acid A receptor alpha in vitro in rat cortical membranes ChEMBL. 12213060
Ki (binding) = 710 nM Ability to inhibit [3H]-Ro- 15-1788 binding to Gamma-aminobutyric-acid A receptor alpha in vitro in rat cortical membranes ChEMBL. 12213060

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

1 literature reference was collected for this gene.

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