Detailed information for compound 260238

Basic information

Technical information
  • TDR Targets ID: 260238
  • Name: (3S)-3-[[(3R)-1-(1-piperidin-4-ylpiperidine-4 -carbonyl)piperidine-3-carbonyl]amino]-3-pyri din-3-ylpropanoic acid
  • MW: 471.592 | Formula: C25H37N5O4
  • H donors: 3 H acceptors: 5 LogP: -2.21 Rotable bonds: 9
    Rule of 5 violations (Lipinski): 1
  • SMILES: OC(=O)C[C@@H](c1cccnc1)NC(=O)[C@@H]1CCCN(C1)C(=O)C1CCN(CC1)C1CCNCC1
  • InChi: 1S/C25H37N5O4/c31-23(32)15-22(19-3-1-9-27-16-19)28-24(33)20-4-2-12-30(17-20)25(34)18-7-13-29(14-8-18)21-5-10-26-11-6-21/h1,3,9,16,18,20-22,26H,2,4-8,10-15,17H2,(H,28,33)(H,31,32)/t20-,22+/m1/s1
  • InChiKey: OSWCPUORIOBICX-IRLDBZIGSA-N  

Network

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Synonyms

  • (3S)-3-[[(3R)-1-[1-(4-piperidyl)piperidine-4-carbonyl]piperidine-3-carbonyl]amino]-3-(3-pyridyl)propanoic acid
  • (3S)-3-[[oxo-[(3R)-1-[oxo-[1-(4-piperidinyl)-4-piperidinyl]methyl]-3-piperidinyl]methyl]amino]-3-(3-pyridyl)propanoic acid
  • (3S)-3-[[(3R)-1-(1-piperidin-4-ylpiperidin-4-yl)carbonylpiperidin-3-yl]carbonylamino]-3-pyridin-3-yl-propanoic acid
  • (3S)-3-[[(3R)-1-[1-(4-piperidyl)isonipecotoyl]nipecotoyl]amino]-3-(3-pyridyl)propionic acid
  • (3S)-3-[[(3R)-1-[1-(4-piperidyl)piperidine-4-carbonyl]piperidine-3-carbonyl]amino]-3-(3-pyridyl)propionic acid

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Homo sapiens integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) References
Homo sapiens integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41) Starlite/ChEMBL References

Predicted pathogen targets for this compound

By orthology
Species Potential target Known druggable target/s Ortholog Group
Loa Loa (eye worm) integrin alpha pat-2 Get druggable targets OG5_129341 All targets in OG5_129341
Echinococcus granulosus integrin beta 2 Get druggable targets OG5_127959 All targets in OG5_127959
Schistosoma mansoni integrin beta subunit Get druggable targets OG5_127959 All targets in OG5_127959
Brugia malayi Integrin beta pat-3 precursor Get druggable targets OG5_127959 All targets in OG5_127959
Schistosoma mansoni integrin alpha Get druggable targets OG5_129341 All targets in OG5_129341
Schistosoma japonicum Integrin beta-PS precursor, putative Get druggable targets OG5_127959 All targets in OG5_127959
Schistosoma japonicum Integrin beta-3 precursor, putative Get druggable targets OG5_127959 All targets in OG5_127959
Loa Loa (eye worm) integrin beta-2 Get druggable targets OG5_127959 All targets in OG5_127959
Echinococcus multilocularis integrin beta 2 Get druggable targets OG5_127959 All targets in OG5_127959
Loa Loa (eye worm) hypothetical protein Get druggable targets OG5_129341 All targets in OG5_129341
Echinococcus granulosus integrin alpha 3 Get druggable targets OG5_129341 All targets in OG5_129341
Schistosoma japonicum IPR013513,Integrin alpha chain, C-terminal cytoplasmic region,domain-containing Get druggable targets OG5_129341 All targets in OG5_129341
Brugia malayi Integrin alpha pat-2 precursor Get druggable targets OG5_129341 All targets in OG5_129341
Schistosoma japonicum ko:K06476 integrin alpha 2B, putative Get druggable targets OG5_129341 All targets in OG5_129341
Loa Loa (eye worm) hypothetical protein Get druggable targets OG5_129341 All targets in OG5_129341
Echinococcus multilocularis integrin alpha 3 Get druggable targets OG5_129341 All targets in OG5_129341
Schistosoma japonicum ko:K06464 integrin beta 2, putative Get druggable targets OG5_127959 All targets in OG5_127959

By sequence similarity to non orthologous known druggable targets
No druggable targets predicted by sequence similarity

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species
Giardia lamblia Fructose-bisphosphate aldolase 0.0327 0.3991 0.5
Brugia malayi Nuclear hormone receptor-like 1 0.0331 0.4043 0.4863
Loa Loa (eye worm) hypothetical protein 0.0296 0.3551 0.436
Brugia malayi hypothetical protein 0.0296 0.3551 0.4247
Echinococcus multilocularis Nuclear hormone receptor HR96 0.0296 0.3551 0.3551
Schistosoma mansoni integrin alpha-ps 0.0083 0.0598 0.0734
Loa Loa (eye worm) hypothetical protein 0.0296 0.3551 0.436
Brugia malayi Integrin alpha cytoplasmic region family protein 0.014 0.1387 0.1537
Schistosoma mansoni ecdysone-induced protein 78c (dr-78) 0.0331 0.4043 0.4964
Onchocerca volvulus Bile acid receptor homolog 0.0627 0.8145 1
Loa Loa (eye worm) hypothetical protein 0.0296 0.3551 0.436
Schistosoma mansoni integrin alpha 0.0185 0.2011 0.247
Echinococcus granulosus hepatocyte nuclear factor 4 alpha 0.0627 0.8145 0.8145
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0327 0.3991 0.5
Loa Loa (eye worm) hypothetical protein 0.0331 0.4043 0.4964
Brugia malayi conserved hypotetical protein 0.0296 0.3551 0.4247
Brugia malayi ecdysone receptor 0.0296 0.3551 0.4247
Echinococcus granulosus ecdysone induced protein 78C 0.0627 0.8145 0.8145
Schistosoma mansoni cellular tumor antigen P53 0.0111 0.0994 0.122
Brugia malayi Nuclear hormone receptor family member nhr-31 0.0627 0.8145 1
Echinococcus multilocularis FTZ F1 alpha 0.0627 0.8145 0.8145
Brugia malayi hypothetical protein 0.0331 0.4043 0.4863
Loa Loa (eye worm) hypothetical protein 0.0296 0.3551 0.436
Schistosoma mansoni zinc finger protein 0.0296 0.3551 0.436
Brugia malayi Nuclear hormone receptor family member nhr-49 0.0627 0.8145 1
Loa Loa (eye worm) steroid hormone receptor 0.0627 0.8145 1
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0327 0.3991 0.5
Onchocerca volvulus 0.0627 0.8145 1
Brugia malayi Nuclear hormone receptor-like 1 0.0627 0.8145 1
Echinococcus multilocularis nuclear receptor subfamily 1 group D 0.0331 0.4043 0.4043
Echinococcus granulosus nuclear receptor subfamily 1 group D 0.0331 0.4043 0.4043
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0327 0.3991 0.5
Brugia malayi nuclear receptor RXR 0.0331 0.4043 0.4863
Schistosoma mansoni Tr4/Tr2 (homologue) 0.0627 0.8145 1
Brugia malayi Nuclear hormone receptor family member nhr-1 0.0627 0.8145 1
Schistosoma mansoni photoreceptor-specific nuclear receptor related 0.0627 0.8145 1
Brugia malayi nuclear hormone receptor 0.0627 0.8145 1
Loa Loa (eye worm) nuclear hormone receptor family member nhr-49 0.0627 0.8145 1
Echinococcus granulosus nuclear receptor nhr 48 0.0296 0.3551 0.3551
Brugia malayi nuclear receptor NHR-88 0.0296 0.3551 0.4247
Brugia malayi nuclear receptor NHR-67 0.0296 0.3551 0.4247
Schistosoma mansoni thyroid hormone receptor 0.0627 0.8145 1
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0327 0.3991 0.5
Echinococcus granulosus guanine nucleotide binding protein Gs subunit 0.0051 0.016 0.016
Loa Loa (eye worm) hypothetical protein 0.0296 0.3551 0.436
Loa Loa (eye worm) kelch domain-containing protein family protein 0.0057 0.0247 0.0303
Loa Loa (eye worm) nuclear Hormone Receptor family member 0.0627 0.8145 1
Loa Loa (eye worm) nuclear hormone receptor family member nhr-41 0.0627 0.8145 1
Mycobacterium tuberculosis Probable fructose-bisphosphate aldolase Fba 0.016 0.1668 0.5
Echinococcus multilocularis Nuclear hormone receptor HR96 0.0296 0.3551 0.3551
Echinococcus multilocularis nuclear receptor 2DBD gamma 0.0627 0.8145 0.8145
Echinococcus multilocularis COUP TF:Svp nuclear hormone receptor 0.0627 0.8145 0.8145
Echinococcus granulosus thyroid hormone receptor alpha 0.0296 0.3551 0.3551
Echinococcus granulosus nuclear receptor subfamily 4 group A 0.0296 0.3551 0.3551
Schistosoma mansoni nuclear hormone receptor superfamily protein-related 0.0296 0.3551 0.436
Brugia malayi Steroid receptor seven-up type 2 0.0627 0.8145 1
Echinococcus multilocularis nuclear receptor nhr 48 0.0296 0.3551 0.3551
Loa Loa (eye worm) hypothetical protein 0.0331 0.4043 0.4964
Loa Loa (eye worm) nuclear receptor nhr-7B 0.0296 0.3551 0.436
Schistosoma mansoni coup transcription factor 0.0627 0.8145 1
Loa Loa (eye worm) hypothetical protein 0.0627 0.8145 1
Loa Loa (eye worm) integrin beta-2 0.0378 0.4697 0.5767
Schistosoma mansoni Guanine nucleotide-binding protein G(s) subunit alpha (Adenylate cyclase-stimulating G alpha protein) 0.0051 0.016 0.0197
Brugia malayi Nuclear hormone receptor family member nhr-19 0.0627 0.8145 1
Brugia malayi Nuclear hormone receptor family member nhr-3 0.0627 0.8145 1
Echinococcus granulosus FTZ F1 nuclear receptor protein 0.0627 0.8145 0.8145
Loa Loa (eye worm) hypothetical protein 0.0627 0.8145 1
Schistosoma mansoni RAR-like nuclear receptor 0.0627 0.8145 1
Brugia malayi nuclear receptor NHR-88 0.0627 0.8145 1
Brugia malayi Integrin alpha pat-2 precursor 0.0185 0.2011 0.2318
Loa Loa (eye worm) hypothetical protein 0.0296 0.3551 0.436
Treponema pallidum fructose-bisphosphate aldolase 0.0327 0.3991 0.5
Echinococcus multilocularis thyroid hormone receptor alpha 0.0627 0.8145 0.8145
Brugia malayi Nuclear hormone receptor family member nhr-25 0.0627 0.8145 1
Loa Loa (eye worm) hypothetical protein 0.0627 0.8145 1
Schistosoma mansoni nuclear receptor 0.0296 0.3551 0.436
Brugia malayi hypothetical protein 0.0057 0.0247 0.0108
Schistosoma mansoni nuclear hormone receptor 0.0627 0.8145 1
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0327 0.3991 0.5
Echinococcus granulosus Nuclear hormone receptor HR96 0.0296 0.3551 0.3551
Schistosoma mansoni Guanine nucleotide-binding protein G(s) subunit alpha (Adenylate cyclase-stimulating G alpha protein) 0.0051 0.016 0.0197
Brugia malayi Nuclear hormone receptor family member nhr-40 0.0627 0.8145 1
Brugia malayi nuclear hormone receptor family member odr-7 0.0296 0.3551 0.4247
Brugia malayi photoreceptor-specific nuclear receptor 0.0627 0.8145 1
Loa Loa (eye worm) nuclear hormone receptor-like 1 0.0331 0.4043 0.4964
Entamoeba histolytica fructose-1,6-bisphosphate aldolase, putative 0.0327 0.3991 0.5
Echinococcus multilocularis hepatocyte nuclear factor 4 alpha 0.0627 0.8145 0.8145
Mycobacterium leprae Probable fructose bisphosphate aldolase Fba 0.016 0.1668 0.5
Loa Loa (eye worm) hypothetical protein 0.0627 0.8145 1
Brugia malayi Kelch motif family protein 0.0057 0.0247 0.0108
Echinococcus multilocularis nuclear receptor 2DBD gamma 0.0627 0.8145 0.8145
Loa Loa (eye worm) nuclear hormone receptor family member nhr-14 0.0627 0.8145 1
Schistosoma mansoni nuclear receptor 0.0296 0.3551 0.436
Schistosoma mansoni nuclear receptor nhr-48 0.0296 0.3551 0.436
Echinococcus multilocularis nuclear receptor subfamily 4 group A 0.0296 0.3551 0.3551
Loa Loa (eye worm) hypothetical protein 0.0296 0.3551 0.436
Loa Loa (eye worm) hypothetical protein 0.0296 0.3551 0.436
Brugia malayi tailless protein 0.0296 0.3551 0.4247
Brugia malayi Nuclear hormone receptor E75 0.0296 0.3551 0.4247
Loa Loa (eye worm) hypothetical protein 0.0296 0.3551 0.436
Loa Loa (eye worm) GTP-binding regulatory protein Gs alpha-S chain 0.0051 0.016 0.0197
Onchocerca volvulus Steroid hormone receptor family member cnr14 homolog 0.0627 0.8145 1
Onchocerca volvulus 0.0296 0.3551 0.3576
Echinococcus granulosus FTZ F1 alpha 0.0627 0.8145 0.8145
Schistosoma mansoni FTZ-F1 nuclear receptor-like protein 0.0627 0.8145 1
Loa Loa (eye worm) hypothetical protein 0.0296 0.3551 0.436
Loa Loa (eye worm) nuclear hormone receptor 0.0296 0.3551 0.436
Echinococcus multilocularis tumor protein p63 0.076 1 1
Echinococcus multilocularis guanine nucleotide binding protein G(s) subunit 0.0051 0.016 0.016
Loa Loa (eye worm) nuclear hormone receptor family member nhr-31 0.0627 0.8145 1
Loa Loa (eye worm) hypothetical protein 0.0057 0.0247 0.0303
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0327 0.3991 0.5
Schistosoma mansoni retinoid-x-receptor (RXR) 0.0331 0.4043 0.4964
Onchocerca volvulus Protein ultraspiracle homolog 0.0627 0.8145 1
Loa Loa (eye worm) hypothetical protein 0.0102 0.0863 0.1059
Echinococcus granulosus retinoic acid receptor rxr beta a 0.0627 0.8145 0.8145
Onchocerca volvulus Nuclear receptor subfamily 6 group A member 1 homolog 0.0296 0.3551 0.3576
Loa Loa (eye worm) nuclear receptor NHR-67 0.0296 0.3551 0.436
Loa Loa (eye worm) hypothetical protein 0.014 0.1387 0.1703
Loa Loa (eye worm) hypothetical protein 0.0296 0.3551 0.436
Echinococcus multilocularis retinoic acid receptor rxr beta a retinoic acid receptor rxr alpha a retinoic acid receptor rxr alpha 0.0296 0.3551 0.3551
Brugia malayi Ligand-binding domain of nuclear hormone receptor family protein 0.0627 0.8145 1
Brugia malayi ecdysteroid receptor 0.0627 0.8145 1
Brugia malayi Nuclear hormone receptor family member nhr-25 0.0627 0.8145 1
Schistosoma mansoni nuclear hormone receptor 0.0296 0.3551 0.436
Brugia malayi nuclear receptor subfamily 1, group D, member 1, putative 0.0296 0.3551 0.4247
Brugia malayi orphan nuclear receptor NR2E1 0.0296 0.3551 0.4247
Loa Loa (eye worm) hypothetical protein 0.0331 0.4043 0.4964
Onchocerca volvulus Nuclear receptor subfamily 6 group A member 1 homolog 0.0296 0.3551 0.3576
Schistosoma mansoni nuclear hormone receptor nor-1/nor-2 0.0627 0.8145 1
Loa Loa (eye worm) nuclear hormone receptor family member nhr-1 0.0627 0.8145 1
Loa Loa (eye worm) hypothetical protein 0.0627 0.8145 1
Schistosoma mansoni nuclear hormone receptor 0.0296 0.3551 0.436
Echinococcus multilocularis integrin beta 2 0.028 0.3337 0.3337
Schistosoma mansoni retinoid-x-receptor (RXR) 0.0627 0.8145 1
Schistosoma mansoni retinoic acid receptor RXR 0.0627 0.8145 1
Echinococcus granulosus nuclear receptor 2DBD gamma 0.0627 0.8145 0.8145
Echinococcus multilocularis nuclear receptor 2DBD gamma 0.0296 0.3551 0.3551
Brugia malayi Nuclear hormone receptor E75 0.0296 0.3551 0.4247
Brugia malayi nuclear hormone receptor family member nhr-6 0.0296 0.3551 0.4247
Brugia malayi nuclear hormone receptor 0.0296 0.3551 0.4247
Loa Loa (eye worm) hypothetical protein 0.0627 0.8145 1
Loa Loa (eye worm) hypothetical protein 0.0331 0.4043 0.4964
Brugia malayi hypothetical protein 0.0331 0.4043 0.4863
Brugia malayi Nuclear hormone receptor family member nhr-41 0.0627 0.8145 1
Brugia malayi steroid hormone receptor 0.0627 0.8145 1
Brugia malayi nuclear receptor RXR 0.0296 0.3551 0.4247
Echinococcus granulosus integrin alpha 3 0.0142 0.1413 0.1413
Echinococcus multilocularis integrin alpha ps 0.0083 0.0598 0.0598
Schistosoma mansoni steroid hormone receptor ad4bp 0.0627 0.8145 1
Echinococcus multilocularis integrin alpha ps 0.0083 0.0598 0.0598
Mycobacterium ulcerans fructose-bisphosphate aldolase 0.016 0.1668 0.5
Echinococcus granulosus Nuclear hormone receptor family member nhr 41 0.0627 0.8145 0.8145
Echinococcus multilocularis guanine nucleotide binding protein G(s) subunit 0.0051 0.016 0.016
Loa Loa (eye worm) nuclear hormone receptor family member nhr-40 0.0627 0.8145 1
Schistosoma mansoni hepatocyte nuclear factor 4-alpha (hnf-4-alpha) 0.0296 0.3551 0.436
Loa Loa (eye worm) hypothetical protein 0.0111 0.0994 0.122
Echinococcus multilocularis FTZ F1 nuclear receptor protein 0.0627 0.8145 0.8145
Echinococcus multilocularis integrin alpha 3 0.0142 0.1413 0.1413
Echinococcus granulosus integrin alpha ps 0.0083 0.0598 0.0598
Brugia malayi Nuclear hormone receptor family member nhr-19 0.0627 0.8145 1
Echinococcus granulosus nuclear receptor 2DBD gamma 0.0296 0.3551 0.3551
Brugia malayi Nuclear hormone receptor family member nhr-14 0.0627 0.8145 1
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0327 0.3991 0.5
Loa Loa (eye worm) DR-78 0.0296 0.3551 0.436
Schistosoma mansoni thyroid hormone receptor 0.0627 0.8145 1
Loa Loa (eye worm) hypothetical protein 0.0627 0.8145 1
Loa Loa (eye worm) hypothetical protein 0.0331 0.4043 0.4964
Echinococcus granulosus integrin beta 2 0.028 0.3337 0.3337
Onchocerca volvulus 0.0296 0.3551 0.3576
Loa Loa (eye worm) hypothetical protein 0.0627 0.8145 1
Echinococcus granulosus COUP TF:Svp nuclear hormone receptor 0.0627 0.8145 0.8145
Loa Loa (eye worm) integrin alpha pat-2 0.0285 0.3399 0.4173
Echinococcus multilocularis Nuclear hormone receptor family member nhr 41 0.0627 0.8145 0.8145
Brugia malayi Ligand-binding domain of nuclear hormone receptor family protein 0.0627 0.8145 1
Loa Loa (eye worm) hypothetical protein 0.0043 0.0047 0.0058
Brugia malayi hypothetical protein 0.0296 0.3551 0.4247
Brugia malayi Nuclear hormone receptor-like 1 0.0331 0.4043 0.4863
Schistosoma mansoni nuclear receptor 2DBD-gamma 0.0627 0.8145 1
Brugia malayi Integrin beta pat-3 precursor 0.0378 0.4697 0.5682
Echinococcus granulosus guanine nucleotide binding protein Gs subunit 0.0051 0.016 0.016
Echinococcus granulosus Nuclear hormone receptor HR96 0.0296 0.3551 0.3551
Echinococcus multilocularis ecdysone induced protein 78C 0.0627 0.8145 0.8145
Loa Loa (eye worm) hypothetical protein 0.0145 0.1461 0.1794
Entamoeba histolytica fructose-1,6-bisphosphate aldolase, putative 0.0327 0.3991 0.5
Loa Loa (eye worm) hypothetical protein 0.0296 0.3551 0.436
Trichomonas vaginalis fructose-bisphosphate aldolase, putative 0.0327 0.3991 0.5
Echinococcus granulosus nuclear receptor 2DBD gamma 0.0627 0.8145 0.8145
Schistosoma mansoni Guanine nucleotide-binding protein G(s) subunit alpha (Adenylate cyclase-stimulating G alpha protein) 0.0051 0.016 0.0197
Schistosoma mansoni integrin alpha-ps 0.0043 0.0047 0.0058
Schistosoma mansoni integrin beta subunit 0.0223 0.254 0.3118
Loa Loa (eye worm) hypothetical protein 0.0296 0.3551 0.436

Activities

Activity type Activity value Assay description Source Reference
Duration (functional) = 180 min Ex vivo duration of inhibition of ADP-induced canine platelet aggregation by 3 mg/kg. ChEMBL. 10602710
IC50 (binding) = 0.65 nM In vitro inhibition of biotinylated fibrinogen binding to immobolized fibrinogen receptor. ChEMBL. 10602710
IC50 (binding) = 0.65 nM In vitro inhibition of biotinylated fibrinogen binding to immobolized fibrinogen receptor. ChEMBL. 10602710
IC50 (functional) = 0.45 uM In vitro inhibitory potency against human gel filtered platelet (GFP) aggregation ChEMBL. 10602710
IC50 (functional) = 0.45 uM In vitro inhibitory potency against human gel filtered platelet (GFP) aggregation ChEMBL. 10602710

Phenotypes

Whole-cell/tissue/organism interactions

Species name Source Reference Is orphan
Homo sapiens ChEMBL23 10602710

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

1 literature reference was collected for this gene.

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