Detailed information for compound 276325

Basic information

Technical information
  • TDR Targets ID: 276325
  • Name: (8aR,12aS,13aS)-2,3-dimethoxy-12-methylsulfon yl-5,6,8,8a,9,10,11,12a,13,13a-decahydroisoqu inolino[2,1-g][1,6]naphthyridine
  • MW: 380.502 | Formula: C19H28N2O4S
  • H donors: 0 H acceptors: 2 LogP: 2 Rotable bonds: 3
    Rule of 5 violations (Lipinski): 1
  • SMILES: COc1cc2c(cc1OC)CCN1[C@H]2C[C@H]2[C@@H](C1)CCCN2S(=O)(=O)C
  • InChi: 1S/C19H28N2O4S/c1-24-18-9-13-6-8-20-12-14-5-4-7-21(26(3,22)23)16(14)11-17(20)15(13)10-19(18)25-2/h9-10,14,16-17H,4-8,11-12H2,1-3H3/t14-,16+,17+/m1/s1
  • InChiKey: RDLZGKTWSRYHLF-PVAVHDDUSA-N  

Network

Hover on a compound node to display the structore

Synonyms

  • (8aR,12aS,13aS)-12-mesyl-2,3-dimethoxy-5,6,8,8a,9,10,11,12a,13,13a-decahydroisoquinolino[2,1-g][1,6]naphthyridine

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Rattus norvegicus Adrenergic receptor alpha-2 Starlite/ChEMBL References

Predicted pathogen targets for this compound

By orthology
No druggable targets predicted by orthology data
By sequence similarity to non orthologous known druggable targets
Species Potential target Known druggable target Length Alignment span Identity
Schistosoma mansoni amine GPCR Adrenergic receptor alpha-2   450 aa 439 aa 29.2 %
Echinococcus multilocularis fmrfamide receptor Adrenergic receptor alpha-2   450 aa 366 aa 19.9 %
Echinococcus multilocularis alpha 1A adrenergic receptor Adrenergic receptor alpha-2   450 aa 478 aa 20.7 %
Echinococcus granulosus alpha 1A adrenergic receptor Adrenergic receptor alpha-2   450 aa 476 aa 21.0 %
Echinococcus granulosus biogenic amine 5HT receptor Adrenergic receptor alpha-2   450 aa 423 aa 31.7 %
Onchocerca volvulus Adrenergic receptor alpha-2   450 aa 420 aa 19.8 %
Loa Loa (eye worm) TYRA-2 protein Adrenergic receptor alpha-2   450 aa 488 aa 23.8 %
Echinococcus multilocularis neuropeptides capa receptor Adrenergic receptor alpha-2   450 aa 486 aa 20.6 %
Schistosoma japonicum ko:K04145 dopamine receptor D2, putative Adrenergic receptor alpha-2   450 aa 473 aa 24.1 %
Echinococcus multilocularis serotonin receptor Adrenergic receptor alpha-2   450 aa 426 aa 31.9 %
Onchocerca volvulus Adrenergic receptor alpha-2   450 aa 467 aa 25.1 %
Schistosoma mansoni biogenic amine (5HT) receptor Adrenergic receptor alpha-2   450 aa 433 aa 27.9 %
Schistosoma japonicum ko:K04207 neuropeptide Y receptor Y5, putative Adrenergic receptor alpha-2   450 aa 378 aa 20.9 %

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species
Plasmodium falciparum bifunctional dihydrofolate reductase-thymidylate synthase 0.2288 0.5433 0.5
Leishmania major dihydrofolate reductase-thymidylate synthase 0.2288 0.5433 0.5
Mycobacterium tuberculosis Dihydrofolate reductase DfrA (DHFR) (tetrahydrofolate dehydrogenase) 0.3635 1 1
Trypanosoma brucei dihydrofolate reductase-thymidylate synthase 0.2288 0.5433 0.5
Echinococcus granulosus dihydrofolate reductase 0.3635 1 1
Plasmodium vivax bifunctional dihydrofolate reductase-thymidylate synthase, putative 0.2288 0.5433 0.5
Mycobacterium ulcerans dihydrofolate reductase DfrA 0.3635 1 1
Toxoplasma gondii bifunctional dihydrofolate reductase-thymidylate synthase 0.2288 0.5433 0.5
Trypanosoma cruzi dihydrofolate reductase-thymidylate synthase 0.2288 0.5433 0.5
Onchocerca volvulus 0.0686 0 0.5
Chlamydia trachomatis dihydrofolate reductase 0.3635 1 0.5
Mycobacterium leprae DIHYDROFOLATE REDUCTASE DFRA (DHFR) (TETRAHYDROFOLATE DEHYDROGENASE) 0.3635 1 1
Brugia malayi Dihydrofolate reductase 0.3635 1 1
Loa Loa (eye worm) dihydrofolate reductase 0.3635 1 1
Echinococcus multilocularis dihydrofolate reductase 0.3635 1 1
Schistosoma mansoni dihydrofolate reductase 0.3635 1 1

Activities

Activity type Activity value Assay description Source Reference
ID50 (functional) = 380 ug kg-1 In vivo inhibition of clonidine induced mydriasis in the rat following i.v. administration. ChEMBL. 1671705
ID50 (functional) = 380 ug kg-1 In vivo inhibition of clonidine induced mydriasis in the rat following i.v. administration. ChEMBL. 1671705
ID50 (functional) = 1600 ug kg-1 In vivo inhibition of clonidine induced mydriasis in the rat following p.o. administration. ChEMBL. 1671705
ID50 (functional) = 1600 ug kg-1 In vivo inhibition of clonidine induced mydriasis in the rat following p.o. administration. ChEMBL. 1671705
Ki (binding) = -8.01 Binding affinity to alpha-2 adrenergic receptor determined by measurement of [3H]-yohimbine displacement from rat cortical membrane ChEMBL. 1671705
Ki (binding) = -4.46 Binding affinity to alpha-1 adrenergic receptor determined by measurement of [3H]-Prazosin displacement from rat cortical membrane ChEMBL. 1671705
Log Ki (binding) = 4.46 Binding affinity to alpha-1 adrenergic receptor determined by measurement of [3H]-Prazosin displacement from rat cortical membrane ChEMBL. 1671705
Log Ki (binding) = 8.01 Binding affinity to alpha-2 adrenergic receptor determined by measurement of [3H]-yohimbine displacement from rat cortical membrane ChEMBL. 1671705
Selectivity ratio (binding) = 3500 Selectivity ratio measured as the pKi (alpha-2) /pKi(alpha-1) receptor values. ChEMBL. 1671705

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

1 literature reference was collected for this gene.

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