Detailed information for compound 353130

Basic information

Technical information
  • TDR Targets ID: 353130
  • Name: N'-benzyl-N-(1,3,4-trioxoisoquinolin-6-yl)but anediamide
  • MW: 379.366 | Formula: C20H17N3O5
  • H donors: 3 H acceptors: 5 LogP: 0.45 Rotable bonds: 8
    Rule of 5 violations (Lipinski): 1
  • SMILES: O=C(NCc1ccccc1)CCC(=O)Nc1ccc2c(c1)C(=O)C(=O)NC2=O
  • InChi: 1S/C20H17N3O5/c24-16(21-11-12-4-2-1-3-5-12)8-9-17(25)22-13-6-7-14-15(10-13)18(26)20(28)23-19(14)27/h1-7,10H,8-9,11H2,(H,21,24)(H,22,25)(H,23,27,28)
  • InChiKey: LCWYDLIAHDDLDJ-UHFFFAOYSA-N  

Network

Hover on a compound node to display the structore

Synonyms

  • N'-benzyl-N-(1,3,4-trioxo-6-isoquinolyl)butanediamide
  • N'-(phenylmethyl)-N-(1,3,4-trioxoisoquinolin-6-yl)butanediamide
  • N'-benzyl-N-(1,3,4-triketo-6-isoquinolyl)succinamide
  • N'-(phenylmethyl)-N-(1,3,4-trioxo-6-isoquinolyl)butanediamide
  • N'-(benzyl)-N-(1,3,4-triketo-6-isoquinolyl)succinamide

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Homo sapiens caspase 3, apoptosis-related cysteine peptidase Starlite/ChEMBL References

Predicted pathogen targets for this compound

By orthology
Species Potential target Known druggable target/s Ortholog Group
Echinococcus multilocularis caspase Get druggable targets OG5_130238 All targets in OG5_130238
Echinococcus multilocularis caspase 3, apoptosis cysteine peptidase Get druggable targets OG5_130238 All targets in OG5_130238
Echinococcus granulosus caspase 3 Get druggable targets OG5_130238 All targets in OG5_130238
Schistosoma mansoni caspase-7 (C14 family) Get druggable targets OG5_130238 All targets in OG5_130238
Echinococcus granulosus caspase 3 apoptosis cysteine peptidase Get druggable targets OG5_130238 All targets in OG5_130238
Echinococcus granulosus caspase Get druggable targets OG5_130238 All targets in OG5_130238
Schistosoma japonicum ko:K04397 caspase 7, apoptosis-related cysteine protease, putative Get druggable targets OG5_130238 All targets in OG5_130238
Schistosoma mansoni caspase-3 (C14 family) Get druggable targets OG5_130238 All targets in OG5_130238
Echinococcus multilocularis caspase 3 Get druggable targets OG5_130238 All targets in OG5_130238
Schistosoma japonicum ko:K02187 caspase 3, apoptosis-related cysteine protease, putative Get druggable targets OG5_130238 All targets in OG5_130238

By sequence similarity to non orthologous known druggable targets
Species Potential target Known druggable target Length Alignment span Identity
Brugia malayi Cell death protein 3 precursor caspase 3, apoptosis-related cysteine peptidase 277 aa 253 aa 38.7 %

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species
Trypanosoma brucei monoglyceride lipase, putative 0.0152 1 0.5
Echinococcus granulosus caspase 3 apoptosis cysteine peptidase 0.012 0.5005 1
Plasmodium falciparum lysophospholipase, putative 0.0152 1 0.5
Trichomonas vaginalis conserved hypothetical protein 0.0152 1 0.5
Schistosoma mansoni caspase-3 (C14 family) 0.012 0.5005 0.5
Trypanosoma brucei monoglyceride lipase, putative 0.0152 1 0.5
Mycobacterium ulcerans lysophospholipase 0.0152 1 0.5
Trichomonas vaginalis conserved hypothetical protein 0.0152 1 0.5
Trypanosoma cruzi monoglyceride lipase, putative 0.0152 1 0.5
Plasmodium falciparum esterase, putative 0.0152 1 0.5
Mycobacterium ulcerans hypothetical protein 0.0152 1 0.5
Mycobacterium leprae POSSIBLE LYSOPHOSPHOLIPASE 0.0152 1 0.5
Plasmodium vivax PST-A protein 0.0152 1 0.5
Trichomonas vaginalis Clan SC, family S33, methylesterase-like serine peptidase 0.0152 1 0.5
Echinococcus multilocularis caspase 3, apoptosis cysteine peptidase 0.012 0.5005 1
Echinococcus granulosus caspase 0.012 0.5005 1
Schistosoma mansoni caspase-7 (C14 family) 0.012 0.5005 0.5
Entamoeba histolytica hydrolase, alpha/beta fold family domain containing protein 0.0152 1 0.5
Leishmania major monoglyceride lipase, putative 0.0152 1 0.5
Trichomonas vaginalis valacyclovir hydrolase, putative 0.0152 1 0.5
Trichomonas vaginalis Clan SC, family S33, methylesterase-like serine peptidase 0.0152 1 0.5
Mycobacterium tuberculosis Possible lysophospholipase 0.0152 1 0.5
Trichomonas vaginalis Clan SC, family S33, methylesterase-like serine peptidase 0.0152 1 0.5
Plasmodium falciparum lysophospholipase, putative 0.0152 1 0.5
Plasmodium falciparum lysophospholipase, putative 0.0152 1 0.5
Trichomonas vaginalis Clan SC, family S33, methylesterase-like serine peptidase 0.0152 1 0.5
Echinococcus multilocularis caspase 0.012 0.5005 1
Trichomonas vaginalis Clan SC, family S33, methylesterase-like serine peptidase 0.0152 1 0.5

Activities

Activity type Activity value Assay description Source Reference
IC50 (binding) = 0.07 uM Inhibition of caspase3 ChEMBL. 16509578
IC50 (binding) = 0.07 uM Inhibition of caspase3 ChEMBL. 16509578

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

1 literature reference was collected for this gene.

If you have references for this compound, please enter them in a user comment (below) or Contact us.