Detailed information for compound 403657

Basic information

Technical information
  • Name: Unnamed compound
  • MW: 1363.42 | Formula: C64H86N10O23
  • H donors: 18 H acceptors: 20 LogP: -1.24 Rotable bonds: 41
    Rule of 5 violations (Lipinski): 4
  • SMILES: NCCCC[C@@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)NC1CC(OC(C1O)C)O[C@H]1C[C@@](O)(Cc2c1c(O)c1c(c2O)C(=O)c2c(C1=O)c(OC)ccc2)C(=O)CO)CC(C)C)CO)CCC(=O)N)Cc1ccc(cc1)O)CO)C)NC(=O)C
  • InChi: 1S/C64H86N10O23/c1-28(2)20-39(60(90)70-38-22-47(96-30(4)52(38)82)97-44-24-64(94,45(80)27-77)23-35-49(44)56(86)51-50(54(35)84)53(83)34-10-9-12-43(95-6)48(34)55(51)85)71-63(93)42(26-76)74-59(89)37(17-18-46(66)81)69-61(91)40(21-32-13-15-33(79)16-14-32)72-62(92)41(25-75)73-57(87)29(3)67-58(88)36(68-31(5)78)11-7-8-19-65/h9-10,12-16,28-30,36-42,44,47,52,75-77,79,82,84,86,94H,7-8,11,17-27,65H2,1-6H3,(H2,66,81)(H,67,88)(H,68,78)(H,69,91)(H,70,90)(H,71,93)(H,72,92)(H,73,87)(H,74,89)/t29-,30?,36-,37-,38?,39-,40-,41-,42-,44-,47?,52?,64-/m0/s1
  • InChiKey: BLFBLVXNBCOQAQ-XYVPWTPMSA-N  


Substructure search Similarity search

Network

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Synonyms

No synonyms found for this compound

Targets

Known targets for this compound

No curated genes were found associated with this compound

Predicted pathogen targets for this compound

By orthology
No druggable targets predicted by orthology data
By sequence similarity to non orthologous known druggable targets
No druggable targets predicted by sequence similarity
Obtained from network model

Ranking Plot

Putative Targets List

Species Potential target Raw Global Species
Leishmania major PIF1 helicase-like protein, putative,DNA repair and recombination protein, mitochondrial precursor, putative 0.0552 0.5 0.5
Entamoeba histolytica hypothetical protein, conserved 0.0552 0.5 0.5
Schistosoma mansoni hypothetical protein 0.0552 0.5 0.5
Trichomonas vaginalis conserved hypothetical protein 0.0552 0.5 0.5
Trypanosoma cruzi DNA repair and recombination helicase protein PIF7, putative 0.0552 0.5 0.5
Trypanosoma brucei DNA repair and recombination helicase protein PIF7 0.0552 0.5 0.5
Trypanosoma brucei DNA repair and recombination helicase protein PIF6 0.0552 0.5 0.5
Giardia lamblia Rrm3p helicase 0.0552 0.5 0.5
Echinococcus multilocularis ATP dependent DNA helicase PIF1 0.0552 0.5 0.5
Leishmania major PIF1 helicase-like protein, putative,DNA repair and recombination protein, mitochondrial precursor, putative 0.0552 0.5 0.5
Trypanosoma cruzi DNA repair and recombination helicase protein PIF7, putative 0.0552 0.5 0.5
Trypanosoma cruzi DNA repair and recombination helicase protein PIF6, putative 0.0552 0.5 0.5
Entamoeba histolytica DNA repair and recombination protein, putative 0.0552 0.5 0.5

Activities

Activity type Activity value Assay description Source Reference
EC50 (functional) = 4.8 uM Concentration required to kill 50% of tumor cells in PSA producing LNCaP human prostate cancer cell line ChEMBL. 11708923
EC50 (functional) 4.8 uM In vitro effective concentration of the compound was determined against LNCaP prostate cancer cell line ChEMBL. 14667208
EC50 (functional) = 4.8 uM Concentration required to kill 50% of tumor cells in PSA producing LNCaP human prostate cancer cell line ChEMBL. 11708923
EC50 (functional) 4.8 uM In vitro effective concentration of the compound was determined against LNCaP prostate cancer cell line ChEMBL. 14667208
EC50 (functional) = 100 uM Concentration required to kill 50% of tumor cells in PSA nonproducing DuPRO human prostate cancer cell line ChEMBL. 11708923
EC50 (functional) 100 uM In vitro effective concentration of the compound was determined against DuPRO cancer cell line ChEMBL. 14667208
EC50 (functional) = 100 uM Concentration required to kill 50% of tumor cells in PSA nonproducing DuPRO human prostate cancer cell line ChEMBL. 11708923
EC50 (functional) 100 uM In vitro effective concentration of the compound was determined against DuPRO cancer cell line ChEMBL. 14667208
T1/2 (ADMET) = 30 min Time required for PSA to hydrolyze 50% (t1/2) ChEMBL. 11708923
T1/2 (ADMET) 30 min Half life period of the compound was determined ChEMBL. 14667208

Phenotypes

Whole-cell/tissue/organism interactions

Species name Source Reference Is orphan
Homo sapiens ChEMBL23 11708923

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

No external resources registered for this compound

Bibliographic References

2 literature references were collected for this gene.

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