Detailed information for compound 535216

Basic information

Technical information
  • TDR Targets ID: 535216
  • Name: (4S)-2-oxo-6-thioxo-hexahydropyrimidine-4-car boxylic acid
  • MW: 174.178 | Formula: C5H6N2O3S
  • H donors: 3 H acceptors: 3 LogP: -0.91 Rotable bonds: 1
    Rule of 5 violations (Lipinski): 1
  • SMILES: O=C1NC(=S)C[C@H](N1)C(=O)O
  • InChi: 1S/C5H6N2O3S/c8-4(9)2-1-3(11)7-5(10)6-2/h2H,1H2,(H,8,9)(H2,6,7,10,11)/t2-/m0/s1
  • InChiKey: MVRPKKZJGHVFOI-REOHCLBHSA-N  

Network

Hover on a compound node to display the structore

Synonyms

  • (4S)-2-oxo-6-thioxo-4-hexahydropyrimidinecarboxylic acid
  • (4S)-2-oxo-6-sulfanylidene-1,3-diazinane-4-carboxylic acid
  • (4S)-2-keto-6-thioxo-hexahydropyrimidine-4-carboxylic acid
  • 6-thiodihydroorotate
  • 118438-67-8
  • TDHO
  • 2-Oxo-6-thioxohexahydropyrimidine-4-carboxylate
  • 2-Pyrimidinecarboxylic acid, hexahydro-2-oxo-6-thioxo-, (S)-

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Plasmodium falciparum dihydroorotate dehydrogenase Curated by TDR Targets References
Plasmodium falciparum orotidine 5'-phosphate decarboxylase Curated by TDR Targets References

Predicted pathogen targets for this compound

By orthology
Species Potential target Known druggable target/s Ortholog Group
Leishmania braziliensis dihydroorotate dehydrogenase Get druggable targets OG5_127289 All targets in OG5_127289
Mycobacterium tuberculosis Probable orotidine 5'-phosphate decarboxylase PyrF (OMP decarboxylase) (ompdecase) Get druggable targets OG5_126793 All targets in OG5_126793
Loa Loa (eye worm) orotate phosphoribosyltransferase Get druggable targets OG5_126793 All targets in OG5_126793
Mycobacterium ulcerans orotate phosphoribosyltransferase Get druggable targets OG5_126793 All targets in OG5_126793
Candida albicans orotidine-5'-monophosphate decarboxylase Get druggable targets OG5_126793 All targets in OG5_126793
Plasmodium falciparum orotidine 5'-phosphate decarboxylase Get druggable targets OG5_126793 All targets in OG5_126793
Schistosoma japonicum ko:K00226 dihydroorotate oxidase [EC1.3.3.1], putative Get druggable targets OG5_127289 All targets in OG5_127289
Schistosoma mansoni orotidine 5'-phosphate decarboxylase Get druggable targets OG5_126793 All targets in OG5_126793
Leishmania infantum orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative,OMPDCase-OPRTase, putative Get druggable targets OG5_126793 All targets in OG5_126793
Trypanosoma brucei orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative Get druggable targets OG5_126793 All targets in OG5_126793
Mycobacterium leprae PROBABLE OROTATE PHOSPHORIBOSYLTRANSFERASE PYRE (OPRT) (OPRTASE) Get druggable targets OG5_126793 All targets in OG5_126793
Leishmania major dihydroorotate dehydrogenase Get druggable targets OG5_127289 All targets in OG5_127289
Candida albicans likely dihydroorotate oxidase similar to S. pombe ura3 (SPAC57A10.12c) and to S. cerevisiae URA1 (YKL216W) involved in pyrimidin Get druggable targets OG5_127289 All targets in OG5_127289
Plasmodium berghei dihydroorotate dehydrogenase, putative Get druggable targets OG5_127289 All targets in OG5_127289
Leishmania major orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative,OMPDCase-OPRTase, putative Get druggable targets OG5_126793 All targets in OG5_126793
Plasmodium yoelii dihydroorotate dehydrogenase, putative Get druggable targets OG5_127289 All targets in OG5_127289
Mycobacterium tuberculosis Probable orotate phosphoribosyltransferase PyrE (OPRT) (oprtase) Get druggable targets OG5_126793 All targets in OG5_126793
Mycobacterium leprae Probable dihydroorotate dehydrogenase PyrD Get druggable targets OG5_127289 All targets in OG5_127289
Babesia bovis orotidine 5'-phosphate decarboxylase, putative Get druggable targets OG5_126793 All targets in OG5_126793
Toxoplasma gondii dihydroorotate dehydrogenase reveal, putative Get druggable targets OG5_127289 All targets in OG5_127289
Trypanosoma cruzi dihydroorotate dehydrogenase, putative Get druggable targets OG5_127289 All targets in OG5_127289
Schistosoma mansoni dihydroorotate dehydrogenase Get druggable targets OG5_127289 All targets in OG5_127289
Babesia bovis dihydroorotate dehydrogenase Get druggable targets OG5_127289 All targets in OG5_127289
Babesia bovis orotate phosphoribosyltransferase Get druggable targets OG5_126793 All targets in OG5_126793
Brugia malayi orotate phosphoribosyltransferase family protein Get druggable targets OG5_126793 All targets in OG5_126793
Leishmania infantum dihydroorotate dehydrogenase;with=GeneDB:LmjF16.0530 Get druggable targets OG5_127289 All targets in OG5_127289
Theileria parva dihydroorotate dehydrogenase, putative Get druggable targets OG5_127289 All targets in OG5_127289
Plasmodium knowlesi orotate phosphoribosyltransferase, putative Get druggable targets OG5_126793 All targets in OG5_126793
Plasmodium berghei orotate phosphoribosyltransferase, putative Get druggable targets OG5_126793 All targets in OG5_126793
Toxoplasma gondii orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase Get druggable targets OG5_126793 All targets in OG5_126793
Candida albicans likely dihydroorotate oxidase similar to S. pombe ura3 (SPAC57A10.12c) and to S. cerevisiae URA1 (YKL216W) involved in pyrimidin Get druggable targets OG5_127289 All targets in OG5_127289
Leishmania braziliensis orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative,OMPDCase-OPRTase, putative Get druggable targets OG5_126793 All targets in OG5_126793
Plasmodium falciparum orotate phosphoribosyltransferase Get druggable targets OG5_126793 All targets in OG5_126793
Plasmodium berghei orotidine 5'-phosphate decarboxylase, putative Get druggable targets OG5_126793 All targets in OG5_126793
Schistosoma japonicum ko:K00762 orotate phosphoribosyltransferase [EC2.4.2.10], putative Get druggable targets OG5_126793 All targets in OG5_126793
Plasmodium knowlesi dihydroorotate dehydrogenase, putative Get druggable targets OG5_127289 All targets in OG5_127289
Trypanosoma brucei dihydroorotate dehydrogenase (fumarate) Get druggable targets OG5_127289 All targets in OG5_127289
Plasmodium yoelii putative orotidine-monophosphate-decarboxylase Get druggable targets OG5_126793 All targets in OG5_126793
Leishmania mexicana dihydroorotate dehydrogenase, putative Get druggable targets OG5_127289 All targets in OG5_127289
Echinococcus granulosus uridine 5' monophosphate synthase Get druggable targets OG5_126793 All targets in OG5_126793
Trypanosoma brucei gambiense dihydroorotate dehydrogenase, putative Get druggable targets OG5_127289 All targets in OG5_127289
Mycobacterium leprae Probable orotidine 5'-phosphate decarboxylase PyrF (OMP decarboxylase) (OMPDCase) (OMPdecase) Get druggable targets OG5_126793 All targets in OG5_126793
Plasmodium vivax orotate phosphoribosyltransferase, putative Get druggable targets OG5_126793 All targets in OG5_126793
Plasmodium falciparum dihydroorotate dehydrogenase Get druggable targets OG5_127289 All targets in OG5_127289
Brugia malayi Dihydroorotate dehydrogenase, mitochondrial precursor, putative Get druggable targets OG5_127289 All targets in OG5_127289
Echinococcus multilocularis uridine 5' monophosphate synthase Get druggable targets OG5_126793 All targets in OG5_126793
Mycobacterium tuberculosis Probable dihydroorotate dehydrogenase PyrD Get druggable targets OG5_127289 All targets in OG5_127289
Toxoplasma gondii orotate phosphoribosyltransferase Get druggable targets OG5_126793 All targets in OG5_126793
Neospora caninum orotate phosphoribosyltransferase, putative Get druggable targets OG5_126793 All targets in OG5_126793
Plasmodium yoelii URA5 Get druggable targets OG5_126793 All targets in OG5_126793
Mycobacterium ulcerans orotidine 5'-phosphate decarboxylase Get druggable targets OG5_126793 All targets in OG5_126793
Trypanosoma cruzi dihydroorotate dehydrogenase (fumarate), putative Get druggable targets OG5_127289 All targets in OG5_127289
Leishmania mexicana orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative,OMPDCase-OPRTase, putative Get druggable targets OG5_126793 All targets in OG5_126793
Neospora caninum orotidine-monophosphate-decarboxylase, putative Get druggable targets OG5_126793 All targets in OG5_126793
Trypanosoma cruzi orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative Get druggable targets OG5_126793 All targets in OG5_126793
Candida albicans likely Phosphoribosyl transferase similar to S. cerevisiae URA5 (YML106W) orotate phosphoribosyltransferase I involved in pyrimi Get druggable targets OG5_126793 All targets in OG5_126793
Brugia malayi Dihydroorotate dehydrogenase, mitochondrial precursor, putative Get druggable targets OG5_127289 All targets in OG5_127289
Leishmania donovani dihydroorotate dehydrogenase Get druggable targets OG5_127289 All targets in OG5_127289
Wolbachia endosymbiont of Brugia malayi orotate phosphoribosyltransferase Get druggable targets OG5_126793 All targets in OG5_126793
Theileria parva orotate phosphoribosyltransferase, putative Get druggable targets OG5_126793 All targets in OG5_126793
Trypanosoma cruzi orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative Get druggable targets OG5_126793 All targets in OG5_126793
Wolbachia endosymbiont of Brugia malayi dihydroorotate dehydrogenase 2 Get druggable targets OG5_127289 All targets in OG5_127289
Trypanosoma congolense dihydroorotate dehydrogenase, putative Get druggable targets OG5_127289 All targets in OG5_127289
Trypanosoma cruzi orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative Get druggable targets OG5_126793 All targets in OG5_126793
Leishmania donovani orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative Get druggable targets OG5_126793 All targets in OG5_126793
Plasmodium knowlesi orotidine 5'-phosphate decarboxylase, putative Get druggable targets OG5_126793 All targets in OG5_126793
Candida albicans likely Phosphoribosyl transferase similar to S. cerevisiae URA5 (YML106W) orotate phosphoribosyltransferase I involved in pyrimi Get druggable targets OG5_126793 All targets in OG5_126793
Plasmodium vivax orotidine 5'-phosphate decarboxylase, putative Get druggable targets OG5_126793 All targets in OG5_126793
Plasmodium vivax dihydroorotate dehydrogenase, mitochondrial precursor, putative Get druggable targets OG5_127289 All targets in OG5_127289
Trypanosoma congolense orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative Get druggable targets OG5_126793 All targets in OG5_126793
Trypanosoma brucei gambiense orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative,OMPDCase-OPRTase, putative Get druggable targets OG5_126793 All targets in OG5_126793
Theileria parva orotidine 5-phosphate decarboxylase, putative Get druggable targets OG5_126793 All targets in OG5_126793
Mycobacterium ulcerans dihydroorotate dehydrogenase 2 Get druggable targets OG5_127289 All targets in OG5_127289
Candida albicans orotidine-5'-monophosphate decarboxylase Get druggable targets OG5_126793 All targets in OG5_126793
Trypanosoma cruzi dihydroorotate dehydrogenase, putative Get druggable targets OG5_127289 All targets in OG5_127289
Neospora caninum dihydroorotate dehydrogenase, putative Get druggable targets OG5_127289 All targets in OG5_127289

By sequence similarity to non orthologous known druggable targets
No druggable targets predicted by sequence similarity

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species

Activities

No activities found for this compound.

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

5 literature references were collected for this gene.

If you have references for this compound, please enter them in a user comment (below) or Contact us.