Detailed information for compound 69586

Basic information

Technical information
  • TDR Targets ID: 69586
  • Name: N-(phenylmethyl)formamide
  • MW: 135.163 | Formula: C8H9NO
  • H donors: 1 H acceptors: 1 LogP: 1.64 Rotable bonds: 3
    Rule of 5 violations (Lipinski): 1
  • SMILES: O=CNCc1ccccc1
  • InChi: 1S/C8H9NO/c10-7-9-6-8-4-2-1-3-5-8/h1-5,7H,6H2,(H,9,10)
  • InChiKey: IIBOGKHTXBPGEI-UHFFFAOYSA-N  

Network

Hover on a compound node to display the structore

Synonyms

  • N-Benzylformamide
  • N-(phenylmethyl)methanamide
  • N-(benzyl)formamide
  • 6343-54-0
  • Formamide, N-(phenylmethyl)-
  • BNF
  • NSC16247
  • ZINC01733926
  • EINECS 228-739-6
  • C15561
  • STK263697

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Equus caballus Alcohol dehydrogenase Starlite/ChEMBL References
Homo sapiens alcohol dehydrogenase 1B (class I), beta polypeptide Starlite/ChEMBL References
Homo sapiens alcohol dehydrogenase 1C (class I), gamma polypeptide Starlite/ChEMBL References
Homo sapiens alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide Starlite/ChEMBL References

Predicted pathogen targets for this compound

By orthology
Species Potential target Known druggable target/s Ortholog Group
Schistosoma japonicum Alcohol dehydrogenase class-3, putative Get druggable targets OG5_127257 All targets in OG5_127257
Mycobacterium ulcerans zinc-dependent alcohol dehydrogenase Get druggable targets OG5_127257 All targets in OG5_127257
Mycobacterium ulcerans zinc-containing alcohol dehydrogenase NAD dependent AdhB Get druggable targets OG5_127257 All targets in OG5_127257
Candida albicans similar to C termini of C.maltosa FDH1 and S. cerevisiae SFA1 (YDL168W) glutathione-dependent formaldehyde dehydrogenase, long-c Get druggable targets OG5_127257 All targets in OG5_127257
Mycobacterium tuberculosis Probable zinc-type alcohol dehydrogenase AdhD (aldehyde reductase) Get druggable targets OG5_127257 All targets in OG5_127257
Onchocerca volvulus Putative alcohol dehydrogenase Get druggable targets OG5_127257 All targets in OG5_127257
Mycobacterium ulcerans zinc-dependent alcohol dehydrogenase AdhE2 Get druggable targets OG5_127257 All targets in OG5_127257
Schistosoma japonicum ko:K00001 alcohol dehydrogenase [EC1.1.1.1], putative Get druggable targets OG5_127257 All targets in OG5_127257
Schistosoma mansoni alcohol dehydrogenase Get druggable targets OG5_127257 All targets in OG5_127257
Mycobacterium leprae Probable S-nitrosomycothiol reductase MscR Get druggable targets OG5_127257 All targets in OG5_127257
Toxoplasma gondii Zn-containing alcohol dehydrogenase Get druggable targets OG5_127257 All targets in OG5_127257
Mycobacterium tuberculosis Probable zinc-type alcohol dehydrogenase (E subunit) AdhE1 Get druggable targets OG5_127257 All targets in OG5_127257
Mycobacterium tuberculosis Possible zinc-containing alcohol dehydrogenase NAD dependent AdhB Get druggable targets OG5_127257 All targets in OG5_127257
Mycobacterium ulcerans zinc-containing alcohol dehydrogenase NAD-dependent AdhB Get druggable targets OG5_127257 All targets in OG5_127257
Brugia malayi Alcohol dehydrogenase class III Get druggable targets OG5_127257 All targets in OG5_127257
Mycobacterium ulcerans zinc-type alcohol dehydrogenase AdhD Get druggable targets OG5_127257 All targets in OG5_127257
Neospora caninum alcohol dehydrogenase class III, putative Get druggable targets OG5_127257 All targets in OG5_127257
Schistosoma japonicum Alcohol dehydrogenase class-3, putative Get druggable targets OG5_127257 All targets in OG5_127257
Loa Loa (eye worm) alcohol dehydrogenase class III Get druggable targets OG5_127257 All targets in OG5_127257

By sequence similarity to non orthologous known druggable targets
Species Potential target Known druggable target Length Alignment span Identity
Trypanosoma cruzi oxidoreductase, putative alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide 386 aa 329 aa 19.8 %
Toxoplasma gondii quinone oxidoreductase, putative Alcohol dehydrogenase   374 aa 323 aa 23.8 %
Onchocerca volvulus Putative ATP-dependent RNA helicase DDX52 Alcohol dehydrogenase   374 aa 337 aa 21.4 %
Mycobacterium tuberculosis Possible dehydrogenase alcohol dehydrogenase 1C (class I), gamma polypeptide 375 aa 342 aa 27.8 %
Trypanosoma cruzi oxidoreductase, putative Alcohol dehydrogenase   374 aa 318 aa 20.1 %
Onchocerca volvulus Alcohol dehydrogenase   374 aa 376 aa 48.9 %
Mycobacterium tuberculosis Possible dehydrogenase alcohol dehydrogenase 1B (class I), beta polypeptide 375 aa 352 aa 26.4 %
Mycobacterium tuberculosis Possible dehydrogenase Alcohol dehydrogenase   374 aa 350 aa 26.0 %
Candida albicans likely Zinc-binding dehydrogenase, one of two genes similar to S. cerevisiae YAL060W and BDH1 (YAL060W) butanediol dehydrogenase Alcohol dehydrogenase   374 aa 366 aa 24.6 %

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species
Onchocerca volvulus 0.0886 0.1848 0.1747
Loa Loa (eye worm) hypothetical protein 0.0886 0.1848 0.1747
Schistosoma mansoni notch 0.0886 0.1848 0.1747
Onchocerca volvulus 0.3771 1 1
Schistosoma mansoni notch 0.0886 0.1848 0.1747
Loa Loa (eye worm) animal heme peroxidase 0.3771 1 1
Loa Loa (eye worm) hypothetical protein 0.0886 0.1848 0.1747
Loa Loa (eye worm) animal heme peroxidase 0.3771 1 1
Loa Loa (eye worm) hypothetical protein 0.3771 1 1
Schistosoma mansoni Pro-neuregulin-4 membrane-bound isoform (Pro-NRG4) [Contains: Neuregulin-4 (NRG-4)] 0.0886 0.1848 0.1747
Loa Loa (eye worm) Notch2 0.0886 0.1848 0.1747
Brugia malayi notch-like transmembrane receptor 0.0886 0.1848 0.1747
Brugia malayi Animal haem peroxidase family protein 0.3771 1 1
Schistosoma mansoni peroxidasin 0.3771 1 1
Loa Loa (eye worm) hypothetical protein 0.0886 0.1848 0.1747
Brugia malayi EGF-like domain containing protein 0.0886 0.1848 0.1747
Brugia malayi Animal haem peroxidase family protein 0.3771 1 1
Loa Loa (eye worm) hypothetical protein 0.0886 0.1848 0.1747
Schistosoma mansoni notch 0.0886 0.1848 0.1747
Loa Loa (eye worm) blistered cuticle protein 3 0.3771 1 1
Brugia malayi Animal haem peroxidase family protein 0.3771 1 1
Loa Loa (eye worm) hypothetical protein 0.3771 1 1
Onchocerca volvulus 0.3771 1 1
Schistosoma mansoni laminin gamma-3 chain 0.0886 0.1848 0.1747
Loa Loa (eye worm) hypothetical protein 0.3771 1 1
Onchocerca volvulus Putative cubilin 0.0886 0.1848 0.1747
Brugia malayi Calcium binding EGF domain containing protein 0.0886 0.1848 0.1747
Onchocerca volvulus 0.0886 0.1848 0.1747
Brugia malayi Muscle positioning protein 4 0.0886 0.1848 0.1747
Loa Loa (eye worm) animal heme peroxidase 0.3771 1 1
Loa Loa (eye worm) hypothetical protein 0.0886 0.1848 0.1747
Schistosoma mansoni slit 0.0886 0.1848 0.1747
Loa Loa (eye worm) hypothetical protein 0.3771 1 1
Schistosoma mansoni hypothetical protein 0.0886 0.1848 0.1747
Schistosoma mansoni hypothetical protein 0.0886 0.1848 0.1747
Loa Loa (eye worm) hypothetical protein 0.0886 0.1848 0.1747
Onchocerca volvulus Peroxidase homolog 0.3771 1 1
Onchocerca volvulus 0.0886 0.1848 0.1747
Loa Loa (eye worm) notch protein 0.0886 0.1848 0.1747
Brugia malayi Cadherin domain containing protein 0.0886 0.1848 0.1747
Mycobacterium leprae Probable S-nitrosomycothiol reductase MscR 0.0276 0.0122 0.5
Onchocerca volvulus Chorion peroxidase homolog 0.3771 1 1
Loa Loa (eye worm) hypothetical protein 0.3771 1 1
Schistosoma mansoni hypothetical protein 0.0886 0.1848 0.1747
Mycobacterium tuberculosis Probable zinc-type alcohol dehydrogenase AdhD (aldehyde reductase) 0.0276 0.0122 1
Onchocerca volvulus 0.3771 1 1
Schistosoma mansoni septate junction protein 0.0886 0.1848 0.1747
Loa Loa (eye worm) hypothetical protein 0.0886 0.1848 0.1747
Schistosoma mansoni hypothetical protein 0.0886 0.1848 0.1747
Schistosoma mansoni notch 0.0886 0.1848 0.1747
Loa Loa (eye worm) hypothetical protein 0.3771 1 1
Onchocerca volvulus 0.0886 0.1848 0.1747
Loa Loa (eye worm) hypothetical protein 0.3771 1 1
Loa Loa (eye worm) hypothetical protein 0.0886 0.1848 0.1747
Schistosoma mansoni peroxidasin 0.3771 1 1
Loa Loa (eye worm) hypothetical protein 0.0886 0.1848 0.1747
Onchocerca volvulus Peroxidasin homolog 0.3771 1 1
Loa Loa (eye worm) animal heme peroxidase 0.3771 1 1
Brugia malayi Animal haem peroxidase family protein 0.3771 1 1
Loa Loa (eye worm) hypothetical protein 0.0886 0.1848 0.1747
Brugia malayi EGF-like domain containing protein 0.0886 0.1848 0.1747
Mycobacterium ulcerans zinc-dependent alcohol dehydrogenase 0.0276 0.0122 0.5
Loa Loa (eye worm) hypothetical protein 0.0886 0.1848 0.1747
Onchocerca volvulus Neurogenic locus notch homolog 0.0886 0.1848 0.1747
Loa Loa (eye worm) hypothetical protein 0.0886 0.1848 0.1747
Schistosoma mansoni hypothetical protein 0.0886 0.1848 0.1747
Mycobacterium ulcerans zinc-dependent alcohol dehydrogenase AdhE2 0.0276 0.0122 0.5
Loa Loa (eye worm) hypothetical protein 0.0886 0.1848 0.1747
Loa Loa (eye worm) hypothetical protein 0.0886 0.1848 0.1747
Onchocerca volvulus Dual oxidase homolog 0.3771 1 1
Loa Loa (eye worm) hypothetical protein 0.3771 1 1
Loa Loa (eye worm) hypothetical protein 0.0886 0.1848 0.1747
Brugia malayi EGF-like domain containing protein 0.0886 0.1848 0.1747
Schistosoma mansoni hypothetical protein 0.0886 0.1848 0.1747
Mycobacterium ulcerans zinc-containing alcohol dehydrogenase NAD dependent AdhB 0.0276 0.0122 0.5
Brugia malayi Animal haem peroxidase family protein 0.3771 1 1
Schistosoma mansoni notch 0.0886 0.1848 0.1747
Brugia malayi GCC2 and GCC3 family protein 0.0886 0.1848 0.1747
Onchocerca volvulus Neurogenic locus notch protein homolog 0.0886 0.1848 0.1747
Onchocerca volvulus Slit protein homolog 0.0886 0.1848 0.1747
Brugia malayi Delta serrate ligand family protein 0.0886 0.1848 0.1747
Onchocerca volvulus 0.0886 0.1848 0.1747
Loa Loa (eye worm) hypothetical protein 0.3771 1 1
Brugia malayi EGF-like domain containing protein 0.0886 0.1848 0.1747
Brugia malayi EGF-like domain containing protein 0.0886 0.1848 0.1747
Loa Loa (eye worm) hypothetical protein 0.0886 0.1848 0.1747
Loa Loa (eye worm) hypothetical protein 0.3771 1 1
Loa Loa (eye worm) hypothetical protein 0.3771 1 1
Loa Loa (eye worm) hypothetical protein 0.0886 0.1848 0.1747
Schistosoma mansoni notch 0.0886 0.1848 0.1747
Loa Loa (eye worm) hypothetical protein 0.0886 0.1848 0.1747
Loa Loa (eye worm) hypothetical protein 0.0886 0.1848 0.1747
Loa Loa (eye worm) hypothetical protein 0.0886 0.1848 0.1747
Onchocerca volvulus Peroxidase homolog 0.3771 1 1
Loa Loa (eye worm) hypothetical protein 0.0886 0.1848 0.1747
Giardia lamblia High cysteine protein 0.0886 0.1848 0.5
Onchocerca volvulus Peroxidasin homolog 0.3771 1 1
Echinococcus granulosus peroxidasin 0.3771 1 1
Mycobacterium ulcerans zinc-type alcohol dehydrogenase AdhD 0.0276 0.0122 0.5
Brugia malayi Cadherin domain containing protein 0.0886 0.1848 0.1747
Brugia malayi Transmembrane cell adhesion receptor mua-3 precursor, putative 0.0886 0.1848 0.1747
Brugia malayi Blistered cuticle protein 3 0.3771 1 1
Echinococcus multilocularis peroxidasin 0.3771 1 1
Mycobacterium ulcerans zinc-containing alcohol dehydrogenase NAD-dependent AdhB 0.0276 0.0122 0.5
Brugia malayi EGF-like domain containing protein 0.0886 0.1848 0.1747
Brugia malayi Calcium binding EGF domain containing protein 0.0886 0.1848 0.1747
Brugia malayi Peroxidasin 0.3771 1 1
Brugia malayi Calcium binding EGF domain containing protein 0.0886 0.1848 0.1747
Schistosoma mansoni cell polarity protein 0.0886 0.1848 0.1747
Loa Loa (eye worm) hypothetical protein 0.3771 1 1
Loa Loa (eye worm) hypothetical protein 0.0886 0.1848 0.1747
Brugia malayi EGF-like domain containing protein 0.0886 0.1848 0.1747
Loa Loa (eye worm) hypothetical protein 0.3771 1 1
Loa Loa (eye worm) hypothetical protein 0.3771 1 1
Schistosoma mansoni hypothetical protein 0.0886 0.1848 0.1747
Toxoplasma gondii EGF family domain-containing protein 0.0886 0.1848 1

Activities

Activity type Activity value Assay description Source Reference
Ki (binding) = 5.52 Inhibitory activity against horse liver alcohol dehydrogenase (ADH) ChEMBL. 2939242
Ki (binding) = 0.33 uM Inhibition of human alcohol dehydrogenase beta 1 activity ChEMBL. 9572895
Ki (binding) = 0.33 uM Inhibition of human alcohol dehydrogenase beta 1 activity ChEMBL. 9572895
Ki (binding) = 0.74 uM Inhibition of horse liver alcohol dehydrogenase activity ChEMBL. 9572895
Ki (binding) = 0.74 uM Inhibition of horse liver alcohol dehydrogenase activity ChEMBL. 9572895
Ki (binding) = 4.9 uM Inhibition of human alcohol dehydrogenase gamma2 activity ChEMBL. 9572895
Ki (binding) = 4.9 uM Inhibition of human alcohol dehydrogenase gamma2 activity ChEMBL. 9572895
Ki (binding) = 11 uM Inhibition of human alcohol dehydrogenase sigma activity ChEMBL. 9572895
Ki (binding) = 11 uM Inhibition of human alcohol dehydrogenase sigma activity ChEMBL. 9572895
Ki (binding) = 31 uM Inhibition of human alcohol dehydrogenase alpha activity ChEMBL. 9572895
Ki (binding) = 31 uM Inhibition of human alcohol dehydrogenase alpha activity ChEMBL. 9572895
Ki (binding) = 110 uM Inhibition of human alcohol dehydrogenase pi activity ChEMBL. 9572895
Ki (binding) = 110 uM Inhibition of human alcohol dehydrogenase pi activity ChEMBL. 9572895
Log 1/Ki (binding) = 5.52 Inhibitory activity against horse liver alcohol dehydrogenase (ADH) ChEMBL. 2939242

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

2 literature references were collected for this gene.

If you have references for this compound, please enter them in a user comment (below) or Contact us.