Detailed information for compound 840479

Basic information

Technical information
  • TDR Targets ID: 840479
  • Name: 2-[1-oxo-4-(pyridin-3-ylmethyl)phthalazin-2-y l]-N-[3-(trifluoromethyl)phenyl]acetamide
  • MW: 438.402 | Formula: C23H17F3N4O2
  • H donors: 1 H acceptors: 3 LogP: 3.51 Rotable bonds: 7
    Rule of 5 violations (Lipinski): 1
  • SMILES: O=C(Cn1nc(Cc2cccnc2)c2c(c1=O)cccc2)Nc1cccc(c1)C(F)(F)F
  • InChi: 1S/C23H17F3N4O2/c24-23(25,26)16-6-3-7-17(12-16)28-21(31)14-30-22(32)19-9-2-1-8-18(19)20(29-30)11-15-5-4-10-27-13-15/h1-10,12-13H,11,14H2,(H,28,31)
  • InChiKey: ZATQYBJLSJUHIW-UHFFFAOYSA-N  


Substructure search Similarity search

Network

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Synonyms

  • 2-[1-oxo-4-(3-pyridylmethyl)phthalazin-2-yl]-N-[3-(trifluoromethyl)phenyl]acetamide
  • 2-[1-oxo-4-(3-pyridylmethyl)-2-phthalazinyl]-N-[3-(trifluoromethyl)phenyl]acetamide
  • 2-[1-keto-4-(3-pyridylmethyl)phthalazin-2-yl]-N-[3-(trifluoromethyl)phenyl]acetamide
  • 2-[1-oxo-4-(pyridin-3-ylmethyl)phthalazin-2-yl]-N-[3-(trifluoromethyl)phenyl]ethanamide
  • C696-0998
  • NCGC00112069-01

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Homo sapiens nuclear factor, erythroid 2-like 2 Starlite/ChEMBL No references

Predicted pathogen targets for this compound

By orthology
No druggable targets predicted by orthology data
By sequence similarity to non orthologous known druggable targets
No druggable targets predicted by sequence similarity
Obtained from network model

Ranking Plot

Putative Targets List

Species Potential target Raw Global Species
Brugia malayi hypothetical protein 0.0043 0.2503 0.2503
Schistosoma mansoni hypothetical protein 0.0043 0.2503 1
Entamoeba histolytica hypothetical protein 0.0043 0.2503 0.5
Entamoeba histolytica hypothetical protein 0.0043 0.2503 0.5
Schistosoma mansoni transcription factor LCR-F1 0.0043 0.2503 1
Loa Loa (eye worm) transcription factor SMAD2 0.0144 1 1
Loa Loa (eye worm) MH2 domain-containing protein 0.0144 1 1
Echinococcus multilocularis Basic leucine zipper (bZIP) transcription 0.0043 0.2503 1
Entamoeba histolytica hypothetical protein 0.0043 0.2503 0.5
Echinococcus granulosus Basic leucine zipper bZIP transcription 0.0043 0.2503 1
Entamoeba histolytica hypothetical protein 0.0043 0.2503 0.5

Activities

Activity type Activity value Assay description Source Reference
Potency (functional) 9.2 uM PUBCHEM_BIOASSAY: Nrf2 qHTS screen for inhibitors. (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID493153, AID493163, AID504648] ChEMBL. No reference
Potency (functional) = 28.1838 um PUBCHEM_BIOASSAY: Counterscreen qHTS for Inhibitors of Tau Fibril Formation, Fluorescence Polarization. This assay monitors tau fibrillation by fluorescence polarization (FP) of Alexa 594-labeled K18 P301L, which does not fibrillize readily but incorporates into growing filaments of unlabeled tau. (Class of assay: confirmatory) [Related pubchem assays: 596 ] ChEMBL. No reference
Potency (functional) 35.4813 uM PUBCHEM_BIOASSAY: qHTS for Inhibitors of TGF-b. (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID588856, AID588860] ChEMBL. No reference
Potency (functional) 35.4813 uM PubChem BioAssay. A Novel Cell-Based Assay to Identify Small Molecules for B -Galactocerebrosidase. (Class of assay: confirmatory) ChEMBL. No reference
Potency (binding) = 39.8107 um PUBCHEM_BIOASSAY: qHTS for Inhibitors of Tau Fibril Formation, Thioflavin T Binding. (Class of assay: confirmatory) [Related pubchem assays: 596 ] ChEMBL. No reference
Potency (functional) 39.8107 uM PUBCHEM_BIOASSAY: qHTS Assay for Inhibitors of Histone Lysine Methyltransferase G9a. (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID504404] ChEMBL. No reference
Potency (functional) 70.7946 uM PUBCHEM_BIOASSAY: qHTS for Inhibitors of Polymerase Iota. (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID588623] ChEMBL. No reference
Potency (functional) 89.1251 uM PUBCHEM_BIOASSAY: qHTS Assay for the Inhibitors of Human Flap endonuclease 1 (FEN1). (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID488813] ChEMBL. No reference
Potency (functional) 89.1251 uM PUBCHEM_BIOASSAY: qHTS for Inhibitors of Polymerase Kappa. (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID588638] ChEMBL. No reference
Potency (functional) 100 uM PUBCHEM_BIOASSAY: HTS for Inhibitors of HP1-beta Chromodomain Interactions with Methylated Histone Tails. (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID488962] ChEMBL. No reference
Potency (functional) 100 uM PubChem BioAssay. qHTS of PTHR Inhibitors: Primary Screen. (Class of assay: confirmatory) ChEMBL. No reference

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

No literature references available for this target.

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