Detailed information for compound 875498

Basic information

Technical information
  • TDR Targets ID: 875498
  • Name: N'-(2-cyanophenyl)-N-[2-(4-phenylpiperazin-1- yl)-2-pyridin-3-ylethyl]oxamide
  • MW: 454.524 | Formula: C26H26N6O2
  • H donors: 2 H acceptors: 4 LogP: 3.17 Rotable bonds: 9
    Rule of 5 violations (Lipinski): 1
  • SMILES: N#Cc1ccccc1NC(=O)C(=O)NCC(c1cccnc1)N1CCN(CC1)c1ccccc1
  • InChi: 1S/C26H26N6O2/c27-17-20-7-4-5-11-23(20)30-26(34)25(33)29-19-24(21-8-6-12-28-18-21)32-15-13-31(14-16-32)22-9-2-1-3-10-22/h1-12,18,24H,13-16,19H2,(H,29,33)(H,30,34)
  • InChiKey: MDGFYTZUQBTDIG-UHFFFAOYSA-N  


Substructure search Similarity search

Network

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Synonyms

  • N'-(2-cyanophenyl)-N-[2-(4-phenylpiperazin-1-yl)-2-(3-pyridyl)ethyl]oxamide
  • N'-(2-cyanophenyl)-N-[2-(4-phenyl-1-piperazinyl)-2-(3-pyridyl)ethyl]oxamide
  • N'-(2-cyanophenyl)-N-[2-(4-phenylpiperazin-1-yl)-2-pyridin-3-yl-ethyl]ethanediamide
  • E155-0750
  • NCGC00120939-01

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Homo sapiens tumor protein p53 Starlite/ChEMBL No references
Homo sapiens microtubule-associated protein tau Starlite/ChEMBL No references

Predicted pathogen targets for this compound

By orthology
Species Potential target Known druggable target/s Ortholog Group
Echinococcus granulosus tumor protein p63 Get druggable targets OG5_140038 All targets in OG5_140038
Echinococcus granulosus microtubule associated protein 2 Get druggable targets OG5_133504 All targets in OG5_133504
Schistosoma japonicum ko:K04380 microtubule-associated protein tau, putative Get druggable targets OG5_133504 All targets in OG5_133504
Echinococcus multilocularis microtubule associated protein 2 Get druggable targets OG5_133504 All targets in OG5_133504
Schistosoma mansoni microtubule-associated protein tau Get druggable targets OG5_133504 All targets in OG5_133504
Echinococcus multilocularis tumor protein p63 Get druggable targets OG5_140038 All targets in OG5_140038
By sequence similarity to non orthologous known druggable targets
No druggable targets predicted by sequence similarity
Obtained from network model

Ranking Plot

Putative Targets List

Species Potential target Raw Global Species
Trypanosoma cruzi dihydrofolate reductase-thymidylate synthase 0.1272 1 1
Mycobacterium tuberculosis Probable thymidylate synthase ThyA (ts) (TSASE) 0.1129 0.8414 1
Mycobacterium tuberculosis Hypothetical protein 0.0537 0.1828 0.2173
Echinococcus granulosus microtubule associated protein 2 0.0833 0.5122 0.6088
Plasmodium falciparum bifunctional dihydrofolate reductase-thymidylate synthase 0.1272 1 0.5
Schistosoma mansoni microtubule-associated protein tau 0.0833 0.5122 0.6088
Mycobacterium leprae PROBABLE THYMIDYLATE SYNTHASE THYA (TS) (TSASE) 0.1129 0.8414 1
Echinococcus multilocularis microtubule associated protein 2 0.0833 0.5122 0.6088
Echinococcus multilocularis thymidylate synthase 0.1129 0.8414 1
Echinococcus granulosus tumor protein p63 0.0408 0.0391 0.0465
Plasmodium vivax bifunctional dihydrofolate reductase-thymidylate synthase, putative 0.1272 1 0.5
Loa Loa (eye worm) thymidylate synthase 0.1129 0.8414 1
Echinococcus granulosus thymidylate synthase 0.1129 0.8414 1
Trypanosoma brucei dihydrofolate reductase-thymidylate synthase 0.1272 1 0.5
Schistosoma mansoni bifunctional dihydrofolate reductase-thymidylate synthase 0.1129 0.8414 1
Onchocerca volvulus 0.1129 0.8414 0.5
Trichomonas vaginalis conserved hypothetical protein 0.0537 0.1828 0.5
Mycobacterium ulcerans thymidylate synthase 0.1129 0.8414 1
Echinococcus multilocularis tumor protein p63 0.0408 0.0391 0.0465
Brugia malayi thymidylate synthase 0.1129 0.8414 1
Brugia malayi hypothetical protein 0.0537 0.1828 0.2173
Toxoplasma gondii bifunctional dihydrofolate reductase-thymidylate synthase 0.1272 1 0.5
Chlamydia trachomatis dihydrofolate reductase 0.0373 0 0.5

Activities

Activity type Activity value Assay description Source Reference
Potency (functional) = 12.5893 um PUBCHEM_BIOASSAY: qHTS Screen for Compounds that Selectively Target Cancer Cells with p53 Mutations: Cytotoxicity of p53ts Cells at the Nonpermissive Temperature. (Class of assay: confirmatory) ChEMBL. No reference
Potency (functional) = 15.8489 um PUBCHEM_BIOASSAY: Counterscreen qHTS for Inhibitors of Tau Fibril Formation, Fluorescence Polarization. This assay monitors tau fibrillation by fluorescence polarization (FP) of Alexa 594-labeled K18 P301L, which does not fibrillize readily but incorporates into growing filaments of unlabeled tau. (Class of assay: confirmatory) [Related pubchem assays: 596 ] ChEMBL. No reference
Potency (functional) 23.9341 uM PUBCHEM_BIOASSAY: qHTS profiling assay for firefly luciferase inhibitor/activator using purified enzyme and Km concentrations of substrates (counterscreen for miR-21 project). (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID2288, AID2289, AID2598, AID411] ChEMBL. No reference
Potency (functional) = 35.4813 um PUBCHEM_BIOASSAY: qHTS Screen for Compounds that Selectively Target Cancer Cells with p53 Mutations: Cytotoxicity of p53 Null Cells at the Nonpermissive Temperature. (Class of assay: confirmatory) ChEMBL. No reference
Potency (functional) = 35.4813 um PUBCHEM_BIOASSAY: qHTS Assay for Modulators of Lamin A Splicing. (Class of assay: confirmatory) ChEMBL. No reference
Potency (functional) 35.4813 uM PUBCHEM_BIOASSAY: qHTS for Inhibitors of TGF-b. (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID588856, AID588860] ChEMBL. No reference
Potency (functional) 35.4813 uM PUBCHEM_BIOASSAY: qHTS for Inhibitors of TGF-b: Cytotox Counterscreen. (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID588855, AID588860] ChEMBL. No reference
Potency (functional) = 39.8107 um PUBCHEM_BIOASSAY: qHTS Assay for Promiscuous and Specific Inhibitors of Cruzain (without detergent). (Class of assay: confirmatory) [Related pubchem assays: 2158 (Confirmation qHTS Assay for Inhibitors of Cruzain), 2249 (Probe Development Summary of Promiscuous Inhibitors (Artifacts) of Cruzain), 2161 (qHTS Assay for Inhibitors of Papain: Counterscreen for Cruzain Assay), 1478 (qHTS Assay for Promiscuous and Specific Inhibitors of Cruzain (with detergent))] ChEMBL. No reference
Potency (functional) 79.4328 uM PUBCHEM_BIOASSAY: HTS for Inhibitors of HP1-beta Chromodomain Interactions with Methylated Histone Tails. (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID488962] ChEMBL. No reference
Potency (functional) = 112.2018 um PUBCHEM_BIOASSAY: qHTS Inhibitors of AmpC Beta-Lactamase (assay with detergent). (Class of assay: confirmatory) [Related pubchem assays: 1002 (Confirmation Concentration-Response Assay for Inhibitors of AmpC Beta-Lactamase (assay with detergent)), 585 (Promiscuous and Specific Inhibitors of AmpC Beta-Lactamase (assay without detergent) - a screen old NIH MLSMR collection), 584 (Promiscuous and Specific Inhibitors of AmpC Beta-Lactamase (assay with detergent) - a screen of the old NIH MLSMR collection), 1003 (Confirmation Cuvette-Based Assay for Inhibitors of AmpC Beta-Lactamase (assay with detergent))] ChEMBL. No reference

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

No literature references available for this target.

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