Detailed information for compound 937020

Basic information

Technical information
  • Name: Unnamed compound
  • MW: 342.372 | Formula: C16H14N4O3S
  • H donors: 3 H acceptors: 5 LogP: 1.86 Rotable bonds: 7
    Rule of 5 violations (Lipinski): 1
  • SMILES: O=C(Nc1ccc(cc1)c1nc2c([nH]1)nccc2)CSCC(=O)O
  • InChi: 1S/C16H14N4O3S/c21-13(8-24-9-14(22)23)18-11-5-3-10(4-6-11)15-19-12-2-1-7-17-16(12)20-15/h1-7H,8-9H2,(H,18,21)(H,22,23)(H,17,19,20)
  • InChiKey: DZEOFTATUHWECW-UHFFFAOYSA-N  

Network

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Synonyms

No synonyms found for this compound

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Staphylococcus aureus DNA gyrase subunit B Starlite/ChEMBL References
Staphylococcus aureus DNA gyrase Starlite/ChEMBL References

Predicted pathogen targets for this compound

By orthology
Species Potential target Known druggable target/s Ortholog Group
Chlamydia trachomatis DNA gyrase subunit B Get druggable targets OG5_128755 All targets in OG5_128755
Plasmodium vivax DNA gyrase subunit A, putative Get druggable targets OG5_129568 All targets in OG5_129568
Treponema pallidum DNA gyrase, subunit A (gyrA) Get druggable targets OG5_129568 All targets in OG5_129568
Plasmodium falciparum DNA gyrase subunit B Get druggable targets OG5_128755 All targets in OG5_128755
Leishmania major mitochondrial DNA topoisomerase II Get druggable targets OG5_128755 All targets in OG5_128755
Chlamydia trachomatis DNA gyrase subunit A Get druggable targets OG5_129568 All targets in OG5_129568
Theileria parva DNA gyrase subunit B, putative Get druggable targets OG5_128755 All targets in OG5_128755
Leishmania mexicana mitochondrial DNA topoisomerase II Get druggable targets OG5_128755 All targets in OG5_128755
Mycobacterium ulcerans DNA gyrase subunit A Get druggable targets OG5_129568 All targets in OG5_129568
Trypanosoma cruzi mitochondrial DNA topoisomerase II, putative Get druggable targets OG5_128755 All targets in OG5_128755
Plasmodium vivax DNA gyrase subunit B, putative Get druggable targets OG5_128755 All targets in OG5_128755
Plasmodium berghei DNA gyrase subunit A, putative Get druggable targets OG5_129568 All targets in OG5_129568
Plasmodium yoelii DNA topoisomerase II, putative Get druggable targets OG5_128755 All targets in OG5_128755
Mycobacterium leprae Probable DNA gyrase (subunit A) GyrA (DNA topoisomerase (ATP-hydrolysing)) (DNA topoisomerase II) (Type II DNA topoisomerase) Get druggable targets OG5_129568 All targets in OG5_129568
Trypanosoma cruzi mitochondrial DNA topoisomerase II, putative Get druggable targets OG5_128755 All targets in OG5_128755
Babesia bovis DNA gyrase subunit B, putative Get druggable targets OG5_128755 All targets in OG5_128755
Mycobacterium tuberculosis DNA gyrase (subunit B) GyrB (DNA topoisomerase (ATP-hydrolysing)) (DNA topoisomerase II) (type II DNA topoisomerase) Get druggable targets OG5_128755 All targets in OG5_128755
Plasmodium knowlesi DNA gyrase subunit A, putative Get druggable targets OG5_129568 All targets in OG5_129568
Mycobacterium tuberculosis DNA gyrase (subunit A) GyrA (DNA topoisomerase (ATP-hydrolysing)) (DNA topoisomerase II) (type II DNA topoisomerase) Get druggable targets OG5_129568 All targets in OG5_129568
Toxoplasma gondii ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein Get druggable targets OG5_128755 All targets in OG5_128755
Plasmodium knowlesi DNA gyrase subunit B, putative Get druggable targets OG5_128755 All targets in OG5_128755
Mycobacterium leprae Probable DNA gyrase (subunit B) GyrB (DNA topoisomerase (ATP-hydrolysing)) (DNA topoisomerase II) (Type II DNA topoisomerase) Get druggable targets OG5_128755 All targets in OG5_128755
Theileria parva DNA gyrase subunit A, putative Get druggable targets OG5_129568 All targets in OG5_129568
Plasmodium yoelii DNA gyrase subunit a-related Get druggable targets OG5_129568 All targets in OG5_129568
Leishmania braziliensis mitochondrial DNA topoisomerase II Get druggable targets OG5_128755 All targets in OG5_128755
Mycobacterium ulcerans DNA gyrase subunit B Get druggable targets OG5_128755 All targets in OG5_128755
Neospora caninum hypothetical protein Get druggable targets OG5_128755 All targets in OG5_128755
Treponema pallidum DNA gyrase, subunit B (gyrB) Get druggable targets OG5_128755 All targets in OG5_128755
Toxoplasma gondii DNA gyrase/topoisomerase IV, A subunit domain-containing protein Get druggable targets OG5_129568 All targets in OG5_129568
Leishmania donovani mitochondrial DNA topoisomerase II Get druggable targets OG5_128755 All targets in OG5_128755
Neospora caninum DNA gyrase subunit A, putative Get druggable targets OG5_129568 All targets in OG5_129568
Wolbachia endosymbiont of Brugia malayi DNA gyrase, topoisomerase II, B subunit, GyrB Get druggable targets OG5_128755 All targets in OG5_128755
Trypanosoma brucei DNA topoisomerase ii Get druggable targets OG5_128755 All targets in OG5_128755
Trypanosoma congolense DNA topoisomerase II, putative Get druggable targets OG5_128755 All targets in OG5_128755
Leishmania infantum mitochondrial DNA topoisomerase II Get druggable targets OG5_128755 All targets in OG5_128755
Plasmodium berghei DNA gyrase subunit B, putative Get druggable targets OG5_128755 All targets in OG5_128755
Trypanosoma brucei gambiense DNA topoisomerase II, putative Get druggable targets OG5_128755 All targets in OG5_128755
Wolbachia endosymbiont of Brugia malayi DNA gyrase subunit A Get druggable targets OG5_129568 All targets in OG5_129568
Babesia bovis DNA gyrase A subunit, putative Get druggable targets OG5_129568 All targets in OG5_129568
Plasmodium falciparum DNA gyrase subunit A Get druggable targets OG5_129568 All targets in OG5_129568

By sequence similarity to non orthologous known druggable targets
Species Potential target Known druggable target Length Alignment span Identity
Leishmania mexicana DNA topoisomerase ii DNA gyrase subunit B   644 aa 668 aa 23.1 %
Leishmania braziliensis mitochondrial DNA topoisomerase II DNA gyrase   644 aa 622 aa 23.8 %
Mycobacterium ulcerans DNA gyrase subunit B DNA gyrase   644 aa 663 aa 54.0 %
Toxoplasma gondii DNA topoisomerase 2, putative DNA gyrase subunit B   644 aa 664 aa 24.1 %
Leishmania infantum DNA topoisomerase ii DNA gyrase subunit B   644 aa 666 aa 23.6 %
Leishmania mexicana mitochondrial DNA topoisomerase II DNA gyrase   644 aa 620 aa 23.4 %
Trypanosoma cruzi DNA topoisomerase II, putative DNA gyrase subunit B   644 aa 674 aa 23.0 %
Trypanosoma brucei gambiense DNA topoisomerase II, putative DNA gyrase subunit B   644 aa 676 aa 23.4 %
Trypanosoma congolense DNA topoisomerase II, putative DNA gyrase subunit B   644 aa 678 aa 22.9 %
Trypanosoma congolense DNA topoisomerase II, putative DNA gyrase subunit B   644 aa 678 aa 22.7 %
Trypanosoma brucei DNA topoisomerase II beta, putative DNA gyrase subunit B   644 aa 570 aa 24.0 %
Theileria parva DNA gyrase subunit B, putative DNA gyrase   644 aa 638 aa 37.1 %
Schistosoma mansoni DNA topoisomerase II DNA gyrase subunit B   644 aa 633 aa 24.3 %
Onchocerca volvulus Ectoderm-expressed 4 homolog DNA gyrase subunit B   644 aa 673 aa 24.1 %
Babesia bovis DNA topoisomerase II, putative DNA gyrase subunit B   644 aa 587 aa 22.7 %
Leishmania donovani DNA topoisomerase ii DNA gyrase subunit B   644 aa 666 aa 23.4 %
Plasmodium berghei DNA gyrase subunit B, putative DNA gyrase   644 aa 662 aa 36.3 %
Theileria parva DNA topoisomerase II, putative DNA gyrase subunit B   644 aa 683 aa 23.9 %
Trypanosoma brucei DNA topoisomerase II alpha, putative DNA gyrase subunit B   644 aa 676 aa 23.4 %
Wolbachia endosymbiont of Brugia malayi DNA gyrase, topoisomerase II, B subunit, GyrB DNA gyrase   644 aa 561 aa 50.4 %
Candida albicans DNA topoisomerase II similar to S. cerevisiae TOP2 (YNL088W) DNA gyrase subunit B   644 aa 625 aa 25.6 %
Leishmania donovani mitochondrial DNA topoisomerase II DNA gyrase   644 aa 624 aa 23.2 %
Brugia malayi DNA topoisomerase II, alpha isozyme DNA gyrase subunit B   644 aa 659 aa 24.3 %
Trypanosoma cruzi mitochondrial DNA topoisomerase II, putative DNA gyrase   644 aa 615 aa 22.6 %
Trypanosoma brucei gambiense DNA topoisomerase II, putative DNA gyrase   644 aa 619 aa 25.7 %
Loa Loa (eye worm) TOPoisomerase family member DNA gyrase subunit B   644 aa 668 aa 26.2 %
Echinococcus multilocularis DNA topoisomerase 2 alpha DNA gyrase subunit B   644 aa 612 aa 25.8 %
Brugia malayi Probable DNA topoisomerase II DNA gyrase subunit B   644 aa 672 aa 25.9 %
Dictyostelium discoideum DNA topoisomerase II DNA gyrase subunit B   644 aa 655 aa 23.8 %
Echinococcus granulosus DNA topoisomerase 2 alpha DNA gyrase subunit B   644 aa 613 aa 25.9 %
Mycobacterium tuberculosis DNA gyrase (subunit B) GyrB (DNA topoisomerase (ATP-hydrolysing)) (DNA topoisomerase II) (type II DNA topoisomerase) DNA gyrase   644 aa 661 aa 53.0 %
Brugia malayi DNA gyrase/topoisomerase IV, A subunit family protein DNA gyrase subunit B   644 aa 548 aa 25.7 %
Trypanosoma congolense DNA topoisomerase II, putative DNA gyrase   644 aa 617 aa 24.8 %
Leishmania braziliensis DNA topoisomerase ii DNA gyrase subunit B   644 aa 675 aa 23.0 %
Leishmania major DNA topoisomerase ii DNA gyrase subunit B   644 aa 672 aa 23.4 %
Onchocerca volvulus DNA gyrase subunit B   644 aa 618 aa 26.5 %
Plasmodium falciparum DNA topoisomerase 2 DNA gyrase subunit B   644 aa 647 aa 23.2 %
Neospora caninum hypothetical protein DNA gyrase subunit B   644 aa 693 aa 24.1 %
Leishmania infantum mitochondrial DNA topoisomerase II DNA gyrase   644 aa 624 aa 23.2 %
Trypanosoma brucei gambiense DNA topoisomerase II, putative DNA gyrase subunit B   644 aa 666 aa 23.4 %
Trypanosoma cruzi DNA topoisomerase II, putative DNA gyrase subunit B   644 aa 674 aa 23.0 %
Candida albicans DNA topoisomerase II similar to S. cerevisiae TOP2 (YNL088W) DNA gyrase subunit B   644 aa 625 aa 25.6 %
Trypanosoma brucei DNA topoisomerase ii DNA gyrase   644 aa 619 aa 25.7 %
Trypanosoma cruzi mitochondrial DNA topoisomerase II, putative DNA gyrase   644 aa 615 aa 22.6 %
Plasmodium knowlesi DNA gyrase subunit B, putative DNA gyrase   644 aa 517 aa 36.0 %
Entamoeba histolytica DNA topoisomerase II, putative DNA gyrase subunit B   644 aa 544 aa 25.0 %
Leishmania major mitochondrial DNA topoisomerase II DNA gyrase   644 aa 624 aa 23.1 %
Chlamydia trachomatis DNA gyrase subunit B DNA gyrase   644 aa 561 aa 55.3 %
Onchocerca volvulus DNA gyrase subunit B   644 aa 624 aa 25.8 %
Mycobacterium leprae Probable DNA gyrase (subunit B) GyrB (DNA topoisomerase (ATP-hydrolysing)) (DNA topoisomerase II) (Type II DNA topoisomerase) DNA gyrase   644 aa 667 aa 53.1 %

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species
Trypanosoma cruzi mitochondrial DNA topoisomerase II, putative 0.0128 0.4253 1
Wolbachia endosymbiont of Brugia malayi DNA gyrase, topoisomerase II, B subunit, GyrB 0.0224 1 1
Trypanosoma cruzi mitochondrial DNA topoisomerase II, putative 0.0128 0.4253 1
Leishmania major PIF1 helicase-like protein, putative,DNA repair and recombination protein, mitochondrial precursor, putative 0.0114 0.3406 0.8009
Mycobacterium leprae Probable DNA gyrase (subunit A) GyrA (DNA topoisomerase (ATP-hydrolysing)) (DNA topoisomerase II) (Type II DNA topoisomerase) 0.0065 0.0494 0.5
Echinococcus granulosus ATP dependent DNA helicase PIF1 0.0114 0.3406 1
Leishmania major PIF1 helicase-like protein, putative,DNA repair and recombination protein, mitochondrial precursor, putative 0.0114 0.3406 0.8009
Trypanosoma cruzi DNA repair and recombination helicase protein PIF7, putative 0.0114 0.3406 0.8009
Toxoplasma gondii DNA gyrase/topoisomerase IV, A subunit domain-containing protein 0.0136 0.4741 1
Trypanosoma brucei DNA topoisomerase ii 0.0128 0.4253 1
Trypanosoma brucei DNA repair and recombination helicase protein PIF6 0.0114 0.3406 0.8009
Treponema pallidum DNA gyrase, subunit B (gyrB) 0.0224 1 1
Brugia malayi DNA topoisomerase II, alpha isozyme 0.0075 0.1116 0.5
Entamoeba histolytica hypothetical protein, conserved 0.0114 0.3406 1
Plasmodium vivax DNA gyrase subunit A, putative 0.0136 0.4741 0.4081
Mycobacterium ulcerans DNA gyrase subunit B 0.0224 1 1
Trichomonas vaginalis conserved hypothetical protein 0.0114 0.3406 1
Brugia malayi DNA gyrase/topoisomerase IV, A subunit family protein 0.0075 0.1116 0.5
Plasmodium vivax DNA gyrase subunit B, putative 0.0224 1 1
Entamoeba histolytica DNA repair and recombination protein, putative 0.0114 0.3406 1
Echinococcus multilocularis ATP dependent DNA helicase PIF1 0.0114 0.3406 1
Loa Loa (eye worm) TOPoisomerase family member 0.0075 0.1116 0.5
Onchocerca volvulus DNA topoisomerase 2 homolog 0.0075 0.1116 0.5
Chlamydia trachomatis DNA gyrase subunit B 0.0172 0.6864 0.4036
Mycobacterium tuberculosis DNA gyrase (subunit B) GyrB (DNA topoisomerase (ATP-hydrolysing)) (DNA topoisomerase II) (type II DNA topoisomerase) 0.0224 1 1
Giardia lamblia Rrm3p helicase 0.0114 0.3406 1
Schistosoma mansoni hypothetical protein 0.0114 0.3406 1
Brugia malayi Probable DNA topoisomerase II 0.0075 0.1116 0.5
Plasmodium falciparum DNA gyrase subunit B 0.0224 1 1
Onchocerca volvulus DNA topoisomerase 2 homolog 0.0075 0.1116 0.5
Onchocerca volvulus Putative DNA topoisomerase 2, mitochondrial 0.0075 0.1116 0.5
Trypanosoma brucei DNA repair and recombination helicase protein PIF7 0.0114 0.3406 0.8009
Leishmania major mitochondrial DNA topoisomerase II 0.0128 0.4253 1
Toxoplasma gondii ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein 0.0114 0.341 0.6327
Plasmodium falciparum DNA gyrase subunit A 0.0136 0.4741 0.4081
Trypanosoma cruzi DNA repair and recombination helicase protein PIF6, putative 0.0114 0.3406 0.8009
Trypanosoma cruzi DNA repair and recombination helicase protein PIF7, putative 0.0114 0.3406 0.8009

Activities

Activity type Activity value Assay description Source Reference
IC50 (binding) = 1.7 uM Inhibition of Staphylococcus aureus DNA gyrase-mediated supercoiling of relaxed DNA using pBR 322 as substrate by agarose gel electrophoresis analysis ChEMBL. 25288496
IC50 (binding) = 2.31 uM Inhibition of Staphylococcus aureus DNA gyrase B ATPase activity ChEMBL. 25288496
Inhibition (ADMET) = 31.86 % Cytotoxicity against human HEK293 cells assessed as reduction in cell viability at 100 uM after 72 hrs by MTT assay ChEMBL. 25288496

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

No literature references available for this target.

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