Detailed view for TGME49_304480

Basic information

TDR Targets ID: 260702
Toxoplasma gondii, 3-oxo-5-alpha-steroid 4-dehydrogenase
Source Database / ID:  ToxoDB 

pI: 8.5374 | Length (AA): 324 | MW (Da): 36443 | Paralog Number: 0

Signal peptide: N | GPI Anchor: N | Predicted trans-membrane segments: 3

Druggability Group : DG5

Targets have been classified into druggability groups (DG) according to their druggability score in network driven prioritizations. DGs range from 1 to 5; the higher the group number, the higher the chance of the target to be druggable

Pfam domains

PF02544   3-oxo-5-alpha-steroid 4-dehydrogenase

Gene Ontology

Mouse over links to read term descriptions.
GO:0016627   oxidoreductase activity, acting on the CH-CH group of donors  
GO:0016021   integral to membrane  
GO:0005737   cytoplasm  
GO:0006629   lipid metabolic process  

Metabolic Pathways

This gene is not mapped to any metabolic pathway in KEGG.

Structural information

Modbase 3D models:

No model available for this protein in Modbase.

PDB Structures:

No structure availble in the PDB for this protein

Expression

Upregulation Percent Ranking Stage Dataset
Lower 20-40% percentile ME49 merozoite. Hehl AB
Upregulation Percent Ranking Stage Dataset
Lower 0-20% percentile VEG Tachyzoite, ME49 Tachyzoite, ME49 Oocyst, ME49 Bradyzoite. Gregory Fritz HM Sibley/Greg
Show/Hide expression data references
  • Sibley/Greg ToxoDB
  • Gregory ToxoDB
  • Hehl AB Asexual expansion of Toxoplasma gondii merozoites is distinct from tachyzoites and entails expression of non-overlapping gene families to attach, invade, and replicate within feline enterocytes.
  • Fritz HM Transcriptomic analysis of toxoplasma development reveals many novel functions and structures specific to sporozoites and oocysts.

Orthologs

Ortholog group members (OG5_128852)

Species Accession Gene Product
Arabidopsis thaliana AT2G38050   probable steroid reductase DET2
Brugia malayi Bm1_06570   3-oxo-5-alpha-steroid 4-dehydrogenase 1
Caenorhabditis elegans CELE_F42F12.3   Protein F42F12.3
Caenorhabditis elegans CELE_F19H6.4   Protein F19H6.4
Entamoeba histolytica EHI_197070   steroid 5-alpha reductase, putative
Homo sapiens ENSG00000145545   steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)
Homo sapiens 6716   steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)
Leishmania braziliensis LbrM.17.1210   3-oxo-5-alpha-steroid 4-dehydrogenase-like protein
Leishmania donovani LdBPK_171200.1   3-oxo-5-alpha-steroid 4-dehydrogenase-like protein
Leishmania infantum LinJ.17.1200   3-oxo-5-alpha-steroid 4-dehydrogenase-like protein
Leishmania major LmjF.17.1100   3-oxo-5-alpha-steroid 4-dehydrogenase-like protein
Leishmania mexicana LmxM.17.1100   3-oxo-5-alpha-steroid 4-dehydrogenase-like protein
Loa Loa (eye worm) LOAG_07203   hypothetical protein
Mus musculus ENSMUSG00000021594   steroid 5 alpha-reductase 1
Mus musculus ENSMUSG00000038541   steroid 5 alpha-reductase 2
Mycobacterium ulcerans MUL_3208   hypothetical protein
Oryza sativa 9272051   Os11g0184100
Oryza sativa 4324809   Os01g0851600
Schmidtea mediterranea mk4.000630.02   3-oxo-5-alpha-steroid 4-dehydrogenase 1
Schmidtea mediterranea mk4.000630.01  
Trypanosoma brucei gambiense Tbg972.8.1930   3-oxo-5-alpha-steroid 4-dehydrogenase-like, putative
Trypanosoma brucei Tb927.8.2480   3-oxo-5-alpha-steroid 4-dehydrogenase-like, putative
Trypanosoma cruzi TcCLB.509331.70   3-oxo-5-alpha-steroid 4-dehydrogenase, putative
Trypanosoma cruzi TcCLB.504427.70   3-oxo-5-alpha-steroid 4-dehydrogenase, putative
Toxoplasma gondii TGME49_304480   3-oxo-5-alpha-steroid 4-dehydrogenase
Trichomonas vaginalis TVAG_146690   3-oxo-5-alpha-steroid 4-dehydrogenase, putative
Trichomonas vaginalis TVAG_391520   3-oxo-5-alpha-steroid 4-dehydrogenase, putative
Trichomonas vaginalis TVAG_096490   3-oxo-5-alpha-steroid 4-dehydrogenase, putative

Essentiality

TGME49_304480 has direct evidence of essentiality
Gene/Ortholog Organism Phenotype Source Study
Tb927.8.2480 Trypanosoma brucei no significant loss or gain of fitness in bloodstream forms (3 days) alsford
Tb927.8.2480 Trypanosoma brucei significant gain of fitness in bloodstream forms (6 days) alsford
Tb927.8.2480 Trypanosoma brucei no significant loss or gain of fitness in procyclic forms alsford
Tb927.8.2480 Trypanosoma brucei no significant loss or gain of fitness in differentiation of procyclic to bloodstream forms alsford
CELE_F19H6.4 Caenorhabditis elegans embryonic lethal wormbase
TGME49_304480 this record Toxoplasma gondii Probably non-essential sidik
Show/Hide essentiality data references
  • yeastgenome Systematic deletion of yeast genes Saccharomyces Genome Database
  • neb C. elegans RNAi phenotypes Data obtained from Wormbase WS150, curated by K. Chaudary and T. Carlow, New England Biolabs
  • sidik A Genome-wide CRISPR Screen in Toxoplasma Identifies Essential Apicomplexan Genes. Sidik, Saima M., et al. "A genome-wide CRISPR screen in toxoplasma identifies essential apicomplexan genes." Cell 166.6 (2016): 1423-1435.
  • nmpdr Genome-scale essentiality datasets from published studies (M. tuberculosis) National Microbial Pathogen Data Resource
  • blattner Systematic mutagenesis of the E. coli (MG1655) genome J Bacteriol 2004, 186:4921-4930
  • gerdes Experimental determination and system-level analysis of essential genes in E. coli MG1655 Gerdes et al., J Bacteriol. 2003 185:5673-84
  • keio Systematic single-gene knock-out mutants of E. coli K12 The Keio Collection
  • wormbase C. elegans RNAi experiments WormBase web site, http://www.wormbase.org, release WS170
  • shigen Profiling of E. coli Chromosome (PEC) National Institute of Genetics, Japan
  • alsford High-throughput phenotyping using parallel sequencing of RNA interference targets in the African trypanosome Genome Res 2011, 21:915-924
  • goodall The Essential Genome of Escherichia coli K-12 (Transposon directed high-throughput mutagenesis) Goodall, Emily CA, et al. "The essential genome of Escherichia coli K-12." mBio 9.1 (2018): e02096-17.
  • plasmo Functional Profiling of a Plasmodium Genome Reveals an Abundance of Essential Genes. Bushell, Ellen, et al. "Functional profiling of a Plasmodium genome reveals an abundance of essential genes." Cell 170.2 (2017): 260-272.

Phenotypes and Validation (curated)

We have no manually annotated phenotypes for this target. What does this mean? / Care to help?

In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.

In any case, if you have information about papers containing relevant validation data for this target, please contact us.

Annotated validation

No validation data for this target

Associated compounds / Druggability

Druggability index (range: 0 to 1): 0.8

Known modulators for this target

No chemical compounds associated to this gene

Predicted associations

By orthology with druggable targets
Species Known druggable target Linked compounds Reference
Rattus norvegicus Steroid 5-alpha-reductase 1 Compounds References
Rattus norvegicus Steroid 5-alpha-reductase 2 Compounds References
Homo sapiens steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1) Compounds References
Homo sapiens steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2) Compounds References
By sequence similarity to non orthologous druggable targets
Species Target Length Identity Alignment span Linked Drugs Reference
Rattus norvegicus Steroid 5-alpha-reductase 254 aa 36.1% 255 aa Compounds References
Obtained from network model

Ranking Plot

Putative Drugs List

Compound Raw Global Species
0.0437 0.28 1
0.0487 0.6657 1
0.0363 0.5272 1
0.0566 0.5 0.5
0.1113 1 1
0.073 1 1
4.4851 0.8173 1
0.0689 1 1
0.0189 0.5 0.5
0.6629 1 1
0.1306 1 1
0.1329 1 1
0.8673 1 1
0.0563 0.8771 1
0.0748 0.4228 1
0.0189 0.5341 1
0.0344 0.4035 1
0.0826 0.3134 1
0.049 0.2971 0.5
0.0985 1 1
0.0314 0.322 1
0.1571 1 1
0.4378 1 1
4.489 0.3714 1
0.0452 0.3788 1
0.0366 1 1
0.0377 1 1
0.0329 0.3912 1
0.0893 0.2575 1
0.099 0.282 1
0.0377 1 1
0.1251 0.5 0.5
4.489 0.3714 1
2.9289 0.7476 1
0.0345 0.6525 1
4.489 0.3714 1
0.8989 0.6351 1
0.0313 0.8421 1
0.2419 1 1
0.5091 0.3109 1
0.1042 0.3075 1
0.0312 1 1
0.3306 1 1
0.0348 0.2684 1
0.0389 0.4987 1
2.9289 0.7476 1
0.5407 1 1
2.9289 0.7476 1
2.1965 0.4016 1
0.0965 0.3246 1
0.0377 0.5 0.5
4.5018 0.9192 1
0.0303 0.5421 1
4.489 0.3714 1
0.0934 0.3552 1
2.4884 0.3644 1
0.0354 0.4116 1
3.1097 0.5677 1
4.489 0.3714 1
0.257 0.9203 1
3.1097 0.5677 1
0.0362 0.3971 1
0.0213 1 1
0.0377 0.5 0.5
0.0242 0.6261 1
3.1097 0.5677 1
0.1731 0.5 0.5
0.329 0.4053 0.8606
0.0117 1 1
0.0957 0.5373 1
0.1507 1 1
2.4884 0.3644 1
0.4759 1 1
0.6826 1 1
4.489 0.3714 1
2.4208 1 1
0.0051 1 0.5
4.489 0.3714 1
0.0755 0.7879 1
0.071 1 1
1.1633 0.2926 1
4.489 0.3714 1
0.0563 1 1
2.4884 0.3644 1
0.0303 0.5421 1
0.0935 0.5305 1
0.0355 0.5 0.5
0.0365 0.2517 0
0.0814 1 1
0.0157 0.3981 1
0.0377 0.5 0.5
0.0511 0.5521 1
0.0348 0.5083 1
0.0823 0.3092 0.6988
0.097 0.3611 1
0.0242 0.6261 1
0.0301 0.5 0.5
4.489 0.3714 1
0.158 0.9588 1
2.4208 1 1
1.6747 1 1
0.0377 1 1
0.1391 1 1
0.0377 0.5 0.5
3.1097 0.5677 1
0.0377 0.6708 1
0.0368 0.5 0.5
0.077447 1 1
1.2335 1 1
4.489 0.3714 1
0.0281 0.2553 1
0.2677 0.2881 1
0.0643 0.9943 1
1.4767 1 1
0.6629 1 1
0.8989 0.6351 1
0.0357 0.402 1
0.0314 0.5 0.5
0.0377 0.5 0.5
0.0205 0.8755 1
4.489 0.3714 1
0.0464 1 1
0.0377 0.5 0.5
0.0748 0.4228 1
0.0307 0.3699 1
4.489 0.3714 1
0.0897 0.2515 1
0.0377 0.5 0.5
0.0493 0.2861 1
0.0619 0.3261 1
0.0554 1 1
0.1243 0.2811 1
4.489 0.3714 1
0.0886 0.415 1
0.0348 0.2684 1
0.0318 1 1
0.1887 0.5154 1
2.1702 0.8756 1
0.0973 0.2994 0.6538
0.0574 0.8506 1
0.0365 0.4195 1
0.0646 0.6808 1
0.0411 0.3277 1
0.1408 0.2812 1
0.0303 1 1
0.7853 1 1
0.0134 0.2794 1
0.1873 1 1
0.0149 1 1
0.0948 1 1
0.0303 0.3759 1
0.0189 0.5124 1
0.0878 0.2705 1
0.0618 1 1
0.043 0.5 0.5
0.1229 0.7404 1
0.0304 0.3036 0.5069
0.0044 0.5 0.5
0.096 0.5 0.5
0.3433 1 1
4.489 0.3714 1
0.0377 0.3591 1
0.1224 0.6488 1
0.049 0.288 1
0.0298 0.2733 0.7607
0.0308 0.7534 1
0.0309 0.3491 1
0.0897 0.2503 1
1.6062 0.3145 1
0.0781 0.9869 1
0.0377 0.4229 1
4.489 0.3714 1
0.065 1 1
0.0658 1 1
0.1399 1 1
0.0377 0.4329 1
0.1246 0.3177 1
2.9289 0.7476 1
0.1019 0.2937 1
0.0349 0.74 1
0.0377 0.9858 1
0.1535 1 1
2.4884 0.3644 1
0.257 0.3579 1
0.0377 0.4924 0.6464
0.2411 0.36 0.7738
0.1268 1 1
0.0044 1 1
0.2698 1 1
0.0097 1 0.5
0.5694 0.3317 1
0.099 0.3357 1
0.0309 0.3491 1
0.0155 0.4365 1
0.1343 1 1
0.0199 1 1
0.1538 0.4643 1
0.0189 0.4476 1
3.0912 0.4564 1
0.0544 1 1
0.0199 0.2732 1
0.1084 1 1
0.0402 0.2972 0.6641
1.7874 0.3467 1
2.4208 1 1
0.3518 0.2985 0.9065
0.0641 1 1
0.0897 0.2506 1
0.0345 1 1
0.1096 0.7751 1
0.1391 1 1
4.489 0.3714 1
4.489 0.3714 1
0.5823 1 1
0.0377 0.7787 1
0.0377 1 1
0.0152 0.4198 1
0.0309 0.5 0.5
0.2514 0.6871 1
0.2145 0.6847 1
0.1577 1 1
4.489 0.3714 1
0.0485 0.593 1
0.3051 1 1
4.489 0.3714 1
0.0655 1 1
0.2406 0.3775 1
0.0948 0.2612 1
0.0228 0.2809 1
0.0377 0.5 0.5
0.0314 0.4181 1
0.098 1 1
0.142 1 1
0.7044 0.5 0.5
0.0504 1 0.5
0.024 0.2848 1
0.0302 0.291 1
0.1246 0.317 1
0.2116 1 1
0.0453 1 1
0.0195 0.2728 1
0.0309 0.3491 1
2.1769 0.9098 1
4.489 0.3714 1
0.0405 0.3161 1
0.2163 1 1
0.0375 0.426 1
0.1293 0.2621 1
0.372 1 1
0.0293121 0.328987 1
0.0377 0.5 0.5
0.0479 0.2935 0.9354
0.0258 0.2757 1
0.0043 1 0.5
0.0314 1 1
0.0348 0.3079 0.7472
0.0348 0.2684 1
0.0402 0.2972 0.6641
0.0305 1 1
0.0931 0.3761 0.3828
0.7058 1 1
0.2336 1 1
0.0344 0.3819 1
0.2192 1 1
0.1262 0.3484 1
0.4677 1 1
0.0307 0.4529 1
0.0973 0.2994 0.6538
0.0897 0.4197 1
0.0503 0.3134 1
0.0613 0.2615 1
0.3168 1 1
0.092 1 1
0.0659 1 1
2.8807 0.2721 1
0.0314 0.5 0.5
0.0134 0.2794 1
3.266 0.7475 1
0.1733 1 1
0.0042 0.3015 1
3.1097 0.5677 1
0.5732 0.5 0.5
0.0332 1 1
0.0193 0.5623 0.8026
4.489 0.3714 1
0.3023 1 1
0.0043 1 0.5
4.489 0.3714 1
0.5722 0.5 0.5
0.0206 0.4742 0.8592
0.0377 0.5 0.5
3.1097 0.5677 1
0.05 0.5783 1
0.0156 0.5 0.5
0.0189 0.3409 1
0.1354 1 1
0.0189 0.9366 1
0.0238614 0.448189 1
0.2833 1 1
0.1721 1 1
0.062 1 0.5
0.0736 0.3876 1
0.1571 1 1
0.1504 0.5737 1
2.4208 1 1
0.3116 1 1
0.126 1 1
0.0654 1 1
4.489 0.3714 1
0.0044 1 0.5
0.243 0.6783 1
0.0821 0.474 1
0.7897 1 1
0.1575 1 1
0.0502 0.386 1
4.489 0.3714 1
0.2881 1 1
0.4782 1 1
0.1538 0.4643 1
0.0966 1 1
0.0365 0.4195 1
1.6356 0.4141 1
0.0303 0.5421 1
4.3073 0.4416 1
0.0771 0.4257 1
0.0202 0.4653 1
0.0329 1 1
0.043 0.3766 0.5
0.0827 0.4018 1
0.0203 0.5803 0.7975
3.1097 0.5677 1
0.1415 0.5 0.5
0.1716 0.2611 1
0.0826 0.3134 1
0.0341 0.7943 1
0.0189 1 1
0.0171 0.2656 1
0.9311 1 1
0.1391 1 1
0.0973 0.2994 0.6538
0.0156 0.3728 1
0.097 0.3372 1
0.1268 1 1
0.0948 0.2759 1
0.0949 1 1
0.0377 0.882 0.5
2.65399 0.594144 1
0.9763 0.8569 1
0.1281 0.5 0.5
0.6876 0.3461 1
1.8945 0.4286 1
0.049 0.2971 0.5
0.0502 0.2999 1
0.0166 1 1
0.0309 0.283 1
0.0302 0.4254 1
0.0931 0.3761 0.3828
0.0423 0.4423 1
0.192 1 1
0.0889 0.263 1
0.0157 0.2704 0
0.0377 1 1
2.9289 0.7476 1
2.5946 0.4038 1
0.0646 0.3829 1
4.489 0.3714 1
2.756 0.3218 1
0.0303 0.5421 1
0.1306 0.411 1
0.0189 1 0.5
0.0154 0.7728 1
0.2576 0.3056 1
0.1655 1 1
0.2406 0.3775 1
0.0189 0.3504 1
0.0972 0.68 0.9156
0.0319 0.8794 1
0.0651 0.8102 1
2.4884 0.3644 1
0.0312 0.3936 1
0.0307 0.676 1
2.9289 0.7476 1
0.3312 0.5 0.5
0.1376 0.5 0.5
2.4208 1 1
2.4884 0.3644 1
0.0719 1 1
0.0285 0.4078 1
0.2086 1 1
0.7143 1 1
0.0307 0.6387 1
0.0205 0.5881 0.828
0.0807 0.5 0.5
0.0377 0.5 0.5
6.6201 0.9269 1
0.0377 0.5 0.5
0.0284 1 1
0.0224319 0.265403 1
2.4208 1 1
0.0613 0.2615 1
0.7058 1 1
0.9403 1 1
0.2192 1 1
2.4884 0.3644 1
0.0102 1 1
0.0156 1 1
0.047 1 1
0.0176 0.2748 1
0.1134 0.5002 1
0.0882 0.252 1
0.0326 1 1
0.058 0.4301 0.818
0.0498 0.5 0.5
0.0652 0.7792 1
0.1666 0.4654 1
0.1844 0.3744 1
0.0365 1 0.5
1.7503 0.3499 1
0.0726 0.6373 1
4.489 0.3714 1
0.6449 1 1
0.0473 0.4032 1
0.0508 0.5987 1
0.0362 0.4141 1
0.0314 0.3508 1
0.0925 0.5 0.5
0.4575 1 1
0.2121 1 1
0.0242 1 1
0.2889 1 1
0.0332 0.5 0.5
0.0716 0.5 0.5
2.4208 1 1
0.165 0.6386 1
0.0303 1 1
0.0552 0.313 1
2.4208 1 1
0.031 1 1
0.0816 1 1
4.489 0.3714 1
0.748 1 1
0.0973 0.2746 0.5445
0.257 0.9203 1
0.683 1 1
2.4509 0.2728 1
0.087 0.5558 1
0.0345 0.4802 0.974
0.19 1 1
0.1014 1 1
0.0159 0.3062 1
0.0826 0.3134 1
1.3266 1 1
0.126 1 1
0.0377 0.5 0.5
4.489 0.3714 1
0.0597 0.7472 1
0.0156 0.439 1
0.0159 1 0.5
0.1538 0.4643 1
4.489 0.3714 1
0.0931 0.2689 1
0.0377 0.5 0.5
0.1014 1 1
2.4208 1 1
0.0305 0.3759 1
4.489 0.3714 1
0.0242 0.7105 1
0.0784 0.5244 1
0.1047 1 0.5
0.0653 0.9313 1
0.0501 0.2676 1
0.0377 0.7809 0.7809
2.8815 0.5485 1
0.179 1 1
0.0882 0.3007 1
3.7359 0.3149 1
0.4432 0.6324 1
0.0566 0.2777 0.3847
0.0614 1 1
0.125 1 1
0.4845 1 1
0.7424 0.3281 1
0.0305 0.3759 1
0.7518 1 1
0.0789 0.4355 1
0.0302 0.5 0.5
0.0641 0.3152 1
0.0377 1 1
0.1634 0.9335 1
0.0304 0.3508 1
0.0189 0.3094 0.9351
0.0339 0.3938 1
0.0252 0.6255 1
0.2576 0.3056 1
0.1825 0.532 1
0.0377 0.5 0.5
0.0631 0.3275 1
2.9289 0.7476 1
0.257 0.9203 1
0.0869 0.3798 1
0.2917 1 1
0.016 0.3705 1
0.022 1 1
0.2145 0.6847 1
0.1827 1 0.5
0.0051 1 0.5
4.489 0.3714 1
0.043 0.9214 1
0.0641 0.6371 1
0.257 0.9203 1
0.0242 0.2701 1
0.143 0.3823 1
0.0602 1 1
0.2271 0.5 0.5
0.1504 0.263 1
0.0163 1 0.5
0.0568 0.3271 1
0.0189 1 1
0.0787 0.2883 0.9614
0.085 1 1
2.7217 0.3452 1
0.0189 0.5 0.5
0.107 0.3899 1
0.128 0.4016 1
0.0967 1 1
0.0201 1 0.5
0.0419 0.6755 1
4.489 0.3714 1
0.0708 1 1
0.0972 0.68 0.9156
0.0462 0.6752 1
0.0193 0.5001 0.7386
0.0197 0.5826 1
0.0897 0.2515 1
0.0627 1 1
0.0189 1 1
0.0613 1 1
0.0976 1 1
0.0189 1 1
2.4208 1 1
0.0854 0.3683 1
0.0444 1 1
2.6086 0.481 1
0.0505 0.3178 1
1.6936 0.6165 1
0.7058 1 1
0.0612 0.6382 1
4.489 0.3714 1
0.3273 0.4511 1
4.489 0.3714 1
0.0272117 0.919713 1
2.1705 0.5125 1
0.3273 0.4511 1
0.2958 1 1
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