Caenorhabditis elegans (nematode): CELE_F25B5.4
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Entry
CELE_F25B5.4 CDS
T00019
Symbol
ubq-1
Name
(RefSeq) Ubiquitin-related
KO
K08770
ubiquitin C
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04120
Ubiquitin mediated proteolysis
cel04137
Mitophagy - animal
cel04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CELE_F25B5.4 (ubq-1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
CELE_F25B5.4 (ubq-1)
04137 Mitophagy - animal
CELE_F25B5.4 (ubq-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cel04121
]
CELE_F25B5.4 (ubq-1)
Ubiquitin system [BR:
cel04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
CELE_F25B5.4 (ubq-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
TBK1_ULD
Rad60-SLD_2
Ubiquitin_5
DUF2604
Motif
Other DBs
NCBI-GeneID:
175840
NCBI-ProteinID:
NP_741157
WormBase:
WBGene00006727
UniProt:
P0CG71
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All DBs
Position
III:5940986..5943827
Genome browser
AA seq
838 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEAS
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGDI
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcttcgtcaaaacgttgactggaaaaactatcaccctggaggtggaggcttcc
gataccatcgaaaatgtcaaagccaagatccaagacaaggaaggaattccaccagatcag
cagcgtctcatcttcgccggaaagcagctcgaggacggccgcaccctgtctgactacaac
atccagaaggaatctactcttcacttggttcttcgtcttagaggaggaatgcagatcttt
gtcaagactttgactggaaagaccatcacacttgaagttgaagcttccgacacgatcgag
aacgtcaaggccaagattcaagacaaggagggaatcccaccagatcagcagcgtcttatc
tttgctggaaagcaattggaagatggacgcacactctctgattacaatattcagaaagag
tctactctccacttggtgctccgcctcagaggaggtatgcagatcttcgtcaagacattg
actggaaagaccatcacacttgaagtcgaagcttccgacacgatcgaaaatgtcaaggct
aagattcaagataaagaaggaatcccaccagatcagcaaagacttatcttcgccggaaag
cagctcgaggacggccgcaccctttcggactacaacatccagaaggaatcaactcttcat
ttggttctccgtttgagaggaggtatgcagatcttcgtcaagacattgaccggaaagacc
atcaccctcgaagtcgaagcctccgacaccatcgaaaatgtcaaggccaagatccaagac
aaggaaggaattccaccagatcagcagagacttatttttgctggaaagcaactcgaggat
ggccgtaccctttcggactacaatatccagaaggaatcaaccctccatttggtgctccgc
ctaagaggaggaatgcagatcttcgtcaagactttgaccggaaagactattactcttgag
gttgaagcttctgacactattgagaacgtgaaggccaagatccaagacaaggaaggtatc
ccaccagatcaacagcgtttgatctttgccggaaagcaactcgaggatggccgtactctc
tccgattacaacatccaaaaggagtctactcttcatttggttctccgtctccgaggagga
atgcaaatcttcgtcaagactcttatcggaaagaccatcaccctcgaagtcgaagcctcc
gataccatcgagaacgtgaaggccaagattcaggacaaggaaggaattcctccagatcag
caacgtctcatcttcgctggaaagcagctcgaagacggccgcaccctttcggactacaac
atccagaaggaatcaactcttcatttggttctccgtttgagaggaggtatgcaaatcttc
gtgaagactttgactggaaagactatcaccctcgaagtcgaagcctctgataccatcgaa
aatgtgaaggccaagatccaagacaaggaaggaatcccaccagatcagcagcgtcttatc
tttgccggaaagcaattggaagatgggcgcacgctctctgattacaacattcagaaggaa
tctactcttcacttggttctccgtctccgaggaggaatgcagatcttcgtcaagactctt
acaggaaagaccatcacgctcgaggtggaagcttctgacactattgagaacgtgaaggcc
aagatccaagacaaagaaggtatcccaccagatcagcaacgcttgatcttcgccggaaag
caactcgaggatggccgtaccctttcggactacaatatccagaaggaatcaaccctccat
ttggtgctccgtctcagaggaggtatgcagatcttcgtcaagacattgactggaaagacc
atcacacttgaagtcgaagcctctgataccatcgagaatgtgaaggccaagattcaagac
aaggaaggaatcccaccagatcagcagagactcatcttcgccggaaaacaactcgaagac
ggtcgtaccctctccgactacaacatccaaaaggagtctactcttcatttggttctccgt
ctgagaggaggtatgcagatcttcgtcaagacattgaccggaaagaccatcaccctcgaa
gtcgaagcctccgacaccatcgaaaatgtcaaggccaagatccaagacaaggaaggaatt
ccaccagatcagcagagacttattttcgctggaaagcaactcgaggatggccgtaccctt
tcggactacaatatccagaaggagtctactcttcatttggtgctccgtctcagaggaggt
atgcagatcttcgtcaagactttgactggaaaaaccatcactctcgaggtcgaagcttcg
gacaccattgagaatgtcaaagccaaaatccaggataaggagggaatcccaccagatcag
caacgtttgatctttgctggaaagcagctcgaggatggacgcactctatccgattacaac
atccaaaaggagtcgacacttcatctcgttcttcgtcttcgcggaggagacatttaa
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