Caenorhabditis elegans (nematode): CELE_ZC513.4
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Entry
CELE_ZC513.4 CDS
T00019
Symbol
vars-1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CELE_ZC513.4 (vars-1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cel01007
]
CELE_ZC513.4 (vars-1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cel03016
]
CELE_ZC513.4 (vars-1)
Enzymes [BR:
cel01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
CELE_ZC513.4 (vars-1)
Amino acid related enzymes [BR:
cel01007
]
Aminoacyl-tRNA synthetase
Class I (U)
CELE_ZC513.4 (vars-1)
Transfer RNA biogenesis [BR:
cel03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CELE_ZC513.4 (vars-1)
Prokaryotic type
CELE_ZC513.4 (vars-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
179184
NCBI-ProteinID:
NP_505070
WormBase:
WBGene00006935
Ensembl:
WBGene00006935
UniProt:
Q23360
LinkDB
All DBs
Position
V:8031411..8035025
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AA seq
978 aa
AA seq
DB search
MGKLNRLALFHRSRRQCAYSPTIITRESSSSFNIDEVTQNFEQRTEFAAANYRKNGSLFR
MVLPPPNVTGKLHLGHALTVAVEDAICRHQRNQGNKAEWIPGFDHAGIATQVVVEKILAK
NGKRRLEMTREEFVKECHLWGEKCSSEIRQQLTRMGASLDWTQSYYTLDSKFSEAVTKAF
CILEQEDLITRGKRLVHWCPTLSSTLSSQEVNRIDVPSDGYINLSSSSGTRRRVKFGQMH
VIRYNLVDSESEFIEVGTTRPETLFADVAVAVHPEDDRYSKFHGKHVWSPVTPGRKLFVI
TDSAVSVEKGTGAVKITPSHDALDYEIWNRWILNAGQNTIEEFACIDAEGKMTNSGEDFD
GMDRFEAREKVIQKLSELGNYNGLMKHEGAQVNICSRTGDIIEPRLTEQWFLDCKDMFAR
SADAIKSGKIEVFPEYQSHRLADWFENQEPWCLSRQLWWGHRIPAYNVPGQSKWMVTTDE
EEARRELGDKMQQDPDVLDTWFSSALVPLVKNGWLEGAPIQTPSLNVMETGWDISGFWVA
RMIALNMKLSSGETPFGKVVLHGLVRDNEGRKMSKSLGNVIDPLDVLDGITFEKMIERVK
SSAHEKEEIDNAVKDLTKRFPNGISRCGPDALRFALLKYDVLSTDIPIDVSNAAIEGLHF
CNKIWNLAAYYDQLAEKCEVIKDVDSDRLVDEWIMARLSTTVSTVDAHMNKFSLHLALST
LHKFITSDICDIYLESTKKALWNNDIARIREARSILQRVLQPTLVQLNAFMPFVSEYIYE
RIFKRETGSILFDVVKPSLFIFHRNEELEEAMKLITAMMAAIRSTRQTLQLPQRITFSGI
LEMAPTDTSPSELRILADEVTQTCGFELQKVCREVDEDIKKDHMACPVPGHDAKLWMRID
ADCKEMFILSLKRQLEKTKTRQEQFQARIASYEAICENPNSKPSNVTKTKRKAENARKVV
ENAKEEAERIKQLILNQS
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaattgaatcgattagcactttttcatcgttcaagaaggcaatgtgcttactca
ccgacaattattacacgtgaaagtagtagctcctttaacatcgacgaggtaacacaaaat
tttgaacaaagaacagagtttgccgctgcaaattatcgaaagaatggcagtctatttcgt
atggttttacccccgccaaacgtaactggtaaactgcatttgggacatgctctaacagtt
gcagtggaagatgctatttgtcgacaccagagaaatcagggaaataaagccgaatggatt
cctggatttgatcacgcaggaatcgccacacaagtagtcgtggaaaaaatattggcaaaa
aatggaaagcgacgacttgagatgacacgcgaagagtttgtgaaagaatgccatttgtgg
ggtgaaaaatgctcatctgaaattcgacagcaattgactcgaatgggagcttctctcgac
tggactcaatcatattatactctcgattcaaaattttccgaagccgtcacaaaagctttt
tgcattcttgagcaagaagatttgattacacgtggcaaacgattagttcattggtgtcca
acactatcatctacattatcgagtcaagaagtaaatcgaattgatgttccatctgatggt
tacatcaatttatcgtcgtcaagtggaacacggagaagagtgaagttcggtcaaatgcat
gtaattagatacaatctggtagattctgaatctgaattcattgaagttggaacaactcgc
ccagaaactttgttcgcggatgtggccgtagcagttcatccagaagatgatagatattca
aagttccacggaaaacatgtttggtctccagtaacaccgggaaggaaacttttcgtaatt
actgattcagcagtttccgtggaaaaaggaacgggagctgtaaaaatcacaccatcccat
gatgctcttgattacgaaatttggaatcgttggatattgaatgctggacagaatacaatc
gaagagtttgcatgtattgatgctgagggaaaaatgacaaattctggtgaagattttgat
ggaatggatcgatttgaagccagagaaaaagtgattcaaaaattgtcagaattgggaaac
tacaacggacttatgaaacatgaaggtgcacaagttaatatttgttctagaactggagat
attattgagccgagactcacagaacaatggtttttggattgcaaagatatgttcgccaga
tcagctgatgccataaaatccggaaagattgaagtgtttccggaatatcaatcacacaga
ttggctgactggtttgaaaatcaagaaccatggtgtttaagccggcaactttggtgggga
caccgaattccagcatataatgttcctggtcaatcgaaatggatggtaactacagacgaa
gaagaagctcgacgagaacttggtgacaaaatgcaacaggatccggatgttcttgatact
tggttcagttctgcattggttccactcgtcaaaaatggatggctcgaaggtgccccaatt
cagacgccttcgttgaatgttatggagacaggatgggatatttctggattttgggttgca
cgaatgatagctttaaatatgaaattatcatctggagagacaccatttggaaaagtagtc
ttacatggattggttcgagataatgaaggccgaaaaatgagtaaatcgctgggaaacgta
attgatccattggacgttttggatggtatcacatttgaaaaaatgattgaaagagtgaaa
tcaagtgctcatgaaaaggaagaaatcgataatgctgttaaagatctaacgaaaagattc
ccaaatggaatctccagatgtggaccagatgcacttcgttttgcacttttgaagtatgat
gttctatcaacagatattccaatcgatgtttcaaatgctgcaattgaaggtcttcacttc
tgtaataaaatttggaatttggctgcatattacgatcagcttgctgaaaagtgtgaagtc
atcaaggatgttgattcagatcgacttgtggacgaatggattatggctagactttcgact
acagtttccactgtcgatgctcacatgaacaagttttccctccatttagctctgtctaca
cttcataagttcataacttcggatatttgtgatatttatctggagtccaccaaaaaagct
ttatggaataatgatattgctagaattcgagaagcaagatctatacttcaaagagttcta
caaccgactctagttcaactcaatgcttttatgccatttgttagtgaatatatttatgaa
cggattttcaaacgagaaactggaagtatcctctttgacgtcgtcaagccatcgcttttt
attttccatagaaatgaagaactggaagaagctatgaaattgattactgcaatgatggct
gctattcgatctactcgtcaaacactgcaacttccacaacgaattaccttttctggtatt
ttagaaatggcgccaactgacacatcaccttcggaacttcgaatattagccgacgaagtc
acacaaacttgtggttttgaattgcaaaaagtgtgcagagaagttgatgaagatatcaaa
aaagatcacatggcttgcccagttccaggacatgatgcaaaattgtggatgagaatcgat
gctgactgtaaagaaatgttcattttgagtctcaaacgacaactggaaaagacaaaaacc
cgtcaggaacagtttcaagcaagaattgcatcgtatgaagcaatttgtgagaatcctaat
tccaaaccatcaaatgtaacaaaaacaaaacggaaagctgaaaatgcaagaaaagtcgtc
gaaaatgcaaaagaagaagctgaacggattaaacagctaattttgaatcaaagttag
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