Caenorhabditis elegans (nematode): CELE_R06F6.2
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Entry
CELE_R06F6.2 CDS
T00019
Symbol
vps-11
Name
(RefSeq) Vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04140
Autophagy - animal
cel04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
CELE_R06F6.2 (vps-11)
04148 Efferocytosis
CELE_R06F6.2 (vps-11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cel04131
]
CELE_R06F6.2 (vps-11)
Membrane trafficking [BR:
cel04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
CELE_R06F6.2 (vps-11)
Hops complex
CELE_R06F6.2 (vps-11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
VPS11_C
zf-C3H2C3
zf-rbx1
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-ANAPC11
TPR_11
zf-RING-like
DUF4508
zf-RING_5
TPR_2
Motif
Other DBs
NCBI-GeneID:
174661
NCBI-ProteinID:
NP_496322
WormBase:
WBGene00011067
Ensembl:
WBGene00011067
UniProt:
Q09600
LinkDB
All DBs
Position
II:complement(10788106..10793493)
Genome browser
AA seq
980 aa
AA seq
DB search
MTEFGWRRFNFFDRSVVFDKDDPKQKFMGLKDVAVDCWCSSGGSVYLGEAKGGVFQLTNQ
FSEYYWKAYQKSLASLHSADKYLFSIGEDDETVNTLLKIWDPERVEKNTPHVMRTIRMSP
LNPTSSSPACSIAVHSSLQSVVVGYTDGTVLFYQGDVLHDKSLNSRWIKVRDSSVGEGSV
TGLAIAVLPASKTVVFVITQKHVHSYVLENGRTVIAHKKHDANGATADCWTFDESTGQLI
VASREMLFFYDADQCIDMDGGEVGRCLQLGRGHEKLQLVASGQYLALLTKHHSLIQKERD
SEFMTMLSVYDIKGQYVGFSCSLPNLCRLFIAGSTMLVLSHDGLLSELIEKNLATKLDIL
VKKSMFDVAVLIAKNSRDGGDYLKGIHAKYGNYLYGKGDYENAIQQYKETIGMLEPSYVM
KRYLDSSKIKELCIYLECLHDAKRDNEHQTKILMNAYAKQGEKKKLMEFVNKITDGTRVS
RMRDVFEILLKWNYLAEASLLATKFQMHEDALNVIIHHMHKYTMGVTYISKMPIESVIEM
TGKFGRDLLIHARDDLMHMLWEKIQENTDAKKNNFMRIFDIFMGDMDASRVFLSYIENQT
NEHDEFIIPILECQMRLFKVNSDWSQERLEEDIYRFINKKNEDAALQMAQLFDCTPVIEH
ILMRCHKSKELMMYHQKKRDLEAIIRLCQSCSKEEKRRLWLDALSFIGKHATARDELIII
DLLKEIEASEQIHPLVVLELLAKNEHLTISSVRDYIIAWLRKQQIIIEEDRNTIKENNKA
MGELDGTVESLKFNAQIMQVTKCSACDTPLQLPTVHFLCKHAYHVHCFESYNMDGSDKCP
ACQTTRDTTRDEEISYHKFQKELAEASNGMELIAMYLQRGLFDEKTKKTKKSEAKKDPFS
TGRASTTTNPFDDDEVTTISRTMSTVSSNMATPSRQRSITRKDDDSTNPFFNSDSGTRLS
TYDESKNPFGAPAPSTNPFD
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgacggaattcgggtggcgtcgattcaattttttcgatcgatcagtggtattcgacaag
gatgatccaaagcagaaatttatgggtttgaaagatgtggcagttgattgttggtgcagt
tctggaggatctgtgtatcttggagaagccaagggcggcgtttttcaactgaccaatcaa
ttcagtgaatactactggaaagcgtatcaaaaatcgctcgcctcccttcactctgccgac
aaatacctattttccattggagaagacgatgaaacagtcaatacattgctaaagatctgg
gatccagaacgagttgaaaagaatactcctcatgtgatgagaacaattcgaatgtctcca
cttaatccaacttcatcatcaccagcatgtagtattgcagtacattcaagtcttcaatca
gttgtagttggttatacagatggaactgttttattttatcaaggagatgtacttcatgat
aaaagtttgaattcacgatggattaaagttcgagattcttcagttggagagggttcagtt
acaggactggctattgcagttcttcccgcttcaaaaaccgttgtatttgtaattactcaa
aagcacgtacattcttatgtcctagaaaatggacgaactgtaattgctcataagaaacac
gatgcaaacggagcaactgcagattgttggacttttgatgaaagtactggacaattgatt
gtggcgagtcgggaaatgctctttttctacgatgctgatcagtgtattgatatggatggt
ggagaagttggaagatgtttgcagttgggtagaggacatgaaaagcttcaattagttgct
agtggacaatatttggctttgctcaccaagcatcattctcttattcaaaaagaacgcgat
tcggagtttatgacaatgctcagcgtctacgatatcaaaggacaatacgtcggattctca
tgttcacttcccaatctttgtcgcctattcattgccggaagtaccatgcttgtgctaagt
cacgatggccttttatcagagctgattgagaagaatcttgctacaaaattggatatttta
gtgaaaaagagcatgtttgatgtggcagtgctcattgcaaagaatagcagagatggtgga
gattatttgaaaggaattcatgctaaatatggaaattatttgtatggaaaaggcgattat
gagaatgcgattcaacagtataaggaaacaattggaatgttggaaccatcatatgtgatg
aaaagatatttggatagctccaaaattaaagaattatgtatctacttggaatgccttcac
gatgcaaaacgagataatgagcatcagacaaagattctaatgaacgcctacgcaaagcaa
ggagaaaagaagaaacttatggaatttgtgaataaaattacagatggaacaagagtttct
agaatgagagatgtttttgagatccttctaaagtggaattacctggccgaagcatcactg
ttagcgacgaaatttcaaatgcatgaagatgctcttaatgtgataattcatcatatgcat
aaatatacaatgggtgtcacttatatctcaaaaatgccaattgaaagtgtaattgaaatg
actggaaagtttggaagagatctattgattcatgcacgagatgacctgatgcatatgtta
tgggagaagattcaagagaatacggacgctaaaaagaacaattttatgcgaatttttgac
attttcatgggtgatatggatgcttctcgagtctttttgagctatattgagaatcaaaca
aatgaacatgatgagttcattattccgattcttgagtgccagatgagattatttaaagtt
aacagtgattggagccaggagcgtcttgaagaggatatctatcgatttattaataaaaag
aatgaggacgcggctcttcaaatggcacagttatttgattgtactccagtgattgagcac
attttgatgagatgtcataagtcgaaggaattaatgatgtatcatcagaaaaaaagagat
ttggaggcgattattaggctgtgccaaagctgttcgaaagaggaaaaacgccgcttgtgg
ctcgatgcactgtctttcattggaaaacacgcgacagcgagggacgaattaattattatt
gatctactgaaagaaattgaagcatccgagcaaattcatccgcttgtcgtcctggagctt
cttgctaaaaatgagcatttgacaatttcctcggttagggattatattatcgcgtggctt
cgaaagcaacaaattatcattgaagaagacagaaatacgattaaagaaaataataaggca
atgggagaattggatggaactgttgaatcgttgaagttcaacgctcaaataatgcaagta
accaagtgctcggcgtgtgatacacctctacaacttccaactgtacactttttatgcaaa
cacgcatatcatgtacactgcttcgaatcgtataatatggatggaagtgacaagtgtcct
gcatgtcagacaactcgtgacaccactcgagatgaggagattagttatcacaagtttcaa
aaggagttggcagaagcttcgaatggaatggaacttattgcgatgtatctacaaagagga
ctttttgatgagaaaacgaagaaaactaagaaatctgaggctaaaaaagacccattctcc
accggcagagcctctaccacaacaaatccgttcgacgacgatgaagtaacgacaatctcg
agaacaatgtcaacagtatccagtaatatggcaacaccgtcccgacagagatcaatcaca
cggaaagacgatgattcaacgaatccattcttcaattctgattctggaactcggctgagc
acatatgacgagtcgaagaatccatttggagcaccagctccgtccactaacccgtttgat
taa
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