Caenorhabditis elegans (nematode): CELE_Y32F6A.3
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Entry
CELE_Y32F6A.3 CDS
T00019
Symbol
pap-1
Name
(RefSeq) Poly(A) polymerase
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CELE_Y32F6A.3 (pap-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cel03019
]
CELE_Y32F6A.3 (pap-1)
Enzymes [BR:
cel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CELE_Y32F6A.3 (pap-1)
Messenger RNA biogenesis [BR:
cel03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
CELE_Y32F6A.3 (pap-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
Nrap_D2
YtxC
DNA_pol_B_palm
Motif
Other DBs
NCBI-GeneID:
179458
NCBI-ProteinID:
NP_001379022
WormBase:
WBGene00012528
Ensembl:
WBGene00012528
LinkDB
All DBs
Position
V:10441981..10446467
Genome browser
AA seq
655 aa
AA seq
DB search
MSATEKDKTPLLGVSQPISLAHPDSKDIAQTTLLIETLKKFGSYEPKEETEQRMEVLRNL
NRLVKEWVKNVTAMKIPNGEGVNAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRSDF
FTSFKEMLNNDPNVTELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDNL
LRNLDQESVRSLNGCRVAEQLLKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGITW
AILVARACQLYPNASPSRLVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRR
KNTDRFHVMPIITPAFPEQNSTHNVTRSTATVIKNEICEALEICRDISEGKSKWTALFEE
VNFFSRYKHFIALIMAAPNEEEELNYGGFLESRIRLLVQSLERNQDIIIAHNDPNKHKPS
PNAKFDVNPENKRVTVWFIGLEFAEHAKTLDLTNEIQRFKTNVELQASNVKGIGPNCQVQ
IDMFYVKRNSLIQVISAADLRRGRRWKKVVPIATNTSVSSSTPRSVVRTTSTSSVPTTPT
GLAAPKTPLSASVSATNEPDSTTNGTPLSRKRSMDEESSTTVTSQISDESVPKKKTRDDT
LEENRVSMVVEVSNVVVEQRTKVVQEIVDLQADNGLNTSNGLEASEQKMEVPQSV
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgaccgaaaaggacaaaactccacttttgggtgtttctcaacccatttcgcta
gcccatccagattcaaaagacattgcacagacgactttattgatagaaacattgaaaaag
tttggaagctatgaaccaaaagaagaaacagaacaaagaatggaagtacttcgtaatttg
aatcgtctagtcaaagaatgggttaagaatgtaactgccatgaagatcccgaatggagag
ggtgtgaatgcgggtggaaaactttttacttttggatcatatcgtcttggagttcacagt
tctggtgctgatattgacacacttgctgttgtaccacgtcatatcgatcgatcagacttt
ttcacatcattcaaagagatgctcaataacgatccaaatgtgacagaattgcatggtgtt
gaagaagctttcgttccagttatgaaacttaaatattctggtgttgagcttgatattctc
tttgctcgacttgctttgaaagaagtacctgatacccaagagctttctgatgacaacctt
ctcaggaatttggaccaagaaagtgttagatcactaaatggatgcagagtcgctgagcaa
ctgttgaaactggttccacgtcaaaaagaattctgtgtaactctacgagccatcaaacta
tgggcaaaaaatcacggaatttattccaattcgatgggattttttggaggcatcacatgg
gcgattctcgttgctcgagcttgtcagttatatccaaatgcaagtccatcaagacttgtt
catagaatgttcttcattttctcaacgtggacttggcctcatccagtagtactaaatgaa
atgaacaacgacagaaacgatattccgacactgtgcgagttggtttgggatcctcgacga
aaaaatacagatagattccacgtaatgccaattattactccagcattcccagaacagaat
tcgactcataatgtgactcgatccaccgccactgttataaagaacgaaatatgcgaagcc
cttgaaatttgtcgagatatcagtgaaggaaaatcgaaatggactgctttatttgaagaa
gtcaactttttcagcagatataagcattttattgctcttatcatggctgctcctaacgag
gaagaagaattaaactacggtggtttccttgaatcacgtatccgtcttcttgtgcaaagc
cttgaacgtaatcaagatattataatagcccacaacgacccgaataagcataaaccatct
ccaaatgcaaagtttgatgtaaatccagaaaacaagagggttactgtatggtttattggt
cttgaattcgcggaacatgctaaaactcttgatttgacaaatgaaattcaacgattcaaa
acaaatgtcgaactacaagcgagtaatgtgaagggtattggaccaaattgtcaagtgcag
attgatatgttctatgtaaagagaaacagtctgattcaagtgattagtgctgctgatctt
cgccgtggccgtcgctggaagaaagttgttccaattgctacgaatacttccgtcagcagt
tctacaccccgaagtgttgtgcgaactacaagtactagctctgtaccaactactccaact
ggacttgctgctccaaaaacaccactatctgcatcagtttctgccacgaatgaacctgat
tcaacaacaaatggtactccattatcaagaaaacgtagtatggatgaagaatcatcaact
actgtaacttcacaaatttctgatgaatctgtaccaaaaaagaaaacacgtgatgataca
ttagaagagaatagagtttcaatggttgttgaagtttcgaatgttgtggttgaacaaaga
acaaaagttgttcaagaaatagttgatttgcaagctgataatggattgaatacatcaaat
ggtttggaagccagtgaacagaaaatggaggttccacaaagtgtttaa
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