Caenorhabditis elegans (nematode): CELE_Y71H2AM.19
Help
Entry
CELE_Y71H2AM.19 CDS
T00019
Symbol
laf-1
Name
(RefSeq) ATP-dependent RNA helicase laf-1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cel03019
]
CELE_Y71H2AM.19 (laf-1)
03041 Spliceosome [BR:
cel03041
]
CELE_Y71H2AM.19 (laf-1)
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_Y71H2AM.19 (laf-1)
Enzymes [BR:
cel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CELE_Y71H2AM.19 (laf-1)
Messenger RNA biogenesis [BR:
cel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CELE_Y71H2AM.19 (laf-1)
mRNA cycle factors
Common to processing body (P body) and stress granule
CELE_Y71H2AM.19 (laf-1)
Spliceosome [BR:
cel03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CELE_Y71H2AM.19 (laf-1)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CELE_Y71H2AM.19 (laf-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
UTP25
ResIII
Motif
Other DBs
NCBI-GeneID:
190611
NCBI-ProteinID:
NP_001254859
WormBase:
WBGene00002244
Ensembl:
WBGene00002244
UniProt:
D0PV95
LinkDB
All DBs
Position
III:complement(2769356..2779053)
Genome browser
AA seq
708 aa
AA seq
DB search
MESNQSNNGGSGNAALNRGGRYVPPHLRGGDGGAAAAASAGGDDRRGGAGGGGYRRGGGN
SGGGGGGGYDRGYNDNRDDRDNRGGSGGYGRDRNYEDRGYNGGGGGGGNRGYNNNRGGGG
GGYNRQDRGDGGSSNFSRGGYNNRDEGSDNRGSGRSYNNDRRDNGGDGQNTRWNNLDAPP
SRGTSKWENRGARDERIEQELFSGQLSGINFDKYEEIPVEATGDDVPQPISLFSDLSLHE
WIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDA
VHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTPITSALLYGGRENYKDQI
HKLRLGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRMLDMGFEPQIRQIVECNRM
PSKEERITAMFSATFPKEIQLLAQDFLKENYVFLAVGRVGSTSENIMQKIVWVEEDEKRS
YLMDLLDATGDSSLTLVFVETKRGASDLAYYLNRQNYEVVTIHGDLKQFEREKHLDLFRT
GTAPILVATAVAARGLDIPNVKHVINYDLPSDVDEYVHRIGRTGRVGNVGLATSFFNDKN
RNIARELMDLIVEANQELPDWLEGMSGDMRSGGGYRGRGGRGNGQRFGGRDHRYQGGSGN
GGGGNGGGGGFGGGGQRSGGGGGFQSGGGGGRQQQQQQRAQPQQDWWS
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtaaccaatcgaacaatggaggcagtggtaatgctgcattaaatagaggagga
cgttatgtaccaccacatcttcgcggaggagatggtggagctgctgctgctgcttctgca
ggaggtgatgatcgccgcggtggagctggaggcggtggataccgtcgtggaggtggaaac
agtggcggcggcggtggcggaggatatgatcgcggatacaatgacaatcgtgacgatcgt
gacaaccgtggaggaagtggtggttatggaagagatcgtaactacgaggatcgtggttac
aacggcggtggaggtggaggtggaaaccgtggatacaataataatcgcgggggcggtggc
ggaggatataaccgtcaggatagaggtgatggtggatcatcaaacttctcaagaggagga
tataataaccgtgatgaaggttctgataacagaggatccggtagatcatacaataatgat
cgtcgggataatggaggcgatggccaaaacactcgctggaacaatctcgacgcgccacca
agcagaggcacatcaaaatgggagaatcgtggagcccgcgatgagcgtatcgagcaggag
ctcttctccggacagctttccggcattaatttcgacaaatacgaggagattccagttgaa
gcgaccggtgacgatgttccacagccaatcagcctcttctcggatctcagccttcacgaa
tggatcgaagagaatattaaaaccgccggatacgatcggccgacacctgttcagaaatat
tccattccagcattgcagggaggtcgtgacttgatgtcatgtgctcagactggatctgga
aaaactgcggctttcctggttccactggttaatgctattcttcaagatggtcctgatgct
gttcatcgttctgttacaagttctggtggaagaaagaagcagtatccaagtgctcttgtg
ctctcaccgactcgtgagctttcccttcagatcttcaacgagtctcgaaaattcgcctac
cgtaccccaatcacatcagcacttctttacggaggacgcgaaaactacaaggatcaaatt
cacaagcttcgactcggttgtcacattctgatcgcgactccaggtcgtctaatcgatgta
atggatcaaggattaattggaatggaaggatgccgttatttagtgctcgacgaggctgat
cgtatgcttgatatgggtttcgagccacaaatccgtcaaatagtcgaatgtaatcgtatg
ccatcaaaagaagaacgtattactgcaatgttctcagctacattcccaaaagaaattcaa
cttctcgctcaggatttcttgaaagaaaattatgttttcttggctgttggacgtgtcgga
tcaacatctgagaatattatgcaaaagattgtttgggttgaagaagacgaaaaaaggtcg
tatttaatggatcttcttgatgcaactggtgacagttctctaactcttgtattcgttgag
acgaagcgtggagcttctgatttggcatactatttgaatcgtcaaaactatgaagttgtc
actattcatggagatttgaagcaatttgagagagagaaacatttggatctttttagaacc
ggaacagctccaattcttgtcgcaaccgcagtggccgctcgtggtctggatatacctaat
gtgaagcacgtcatcaattatgatctaccatccgacgttgacgagtatgttcaccgtatc
ggacgtaccggacgtgtcggaaacgtcggccttgccacctcgttcttcaacgataaaaat
cgaaatatcgctcgcgagctgatggatttgattgttgaagccaatcaagagttgccggat
tggcttgaaggaatgtctggagatatgagaagtggaggcggataccgtggacgtggtgga
cgtggaaatggacaacgcttcggaggtcgcgatcaccgttatcaaggtggaagtggaaac
ggcggaggcggcaacggaggcggcggtggcttcggaggcggtggacaacgttccggtgga
ggcggtggattccagtcaggcggtggtggaggtcgccaacagcaacaacagcaacgtgct
cagcctcaacaggattggtggagttaa
DBGET
integrated database retrieval system
