Caenorhabditis elegans (nematode): CELE_C47E12.1
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Entry
CELE_C47E12.1 CDS
T00019
Symbol
sars-1
Name
(RefSeq) putative serine--tRNA ligase, cytoplasmic
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CELE_C47E12.1 (sars-1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cel01007
]
CELE_C47E12.1 (sars-1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cel03016
]
CELE_C47E12.1 (sars-1)
Enzymes [BR:
cel01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CELE_C47E12.1 (sars-1)
Amino acid related enzymes [BR:
cel01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CELE_C47E12.1 (sars-1)
Transfer RNA biogenesis [BR:
cel03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CELE_C47E12.1 (sars-1)
Prokaryotic type
CELE_C47E12.1 (sars-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Phage_TAC_7
Motif
Other DBs
NCBI-GeneID:
177859
NCBI-ProteinID:
NP_001379106
WormBase:
WBGene00005663
Ensembl:
WBGene00005663
LinkDB
All DBs
Position
IV:10003726..10005578
Genome browser
AA seq
487 aa
AA seq
DB search
MVLDIDMFRTEKGGNPEIIRKSQQDRFKDPKLVDEVIELDEKWRKERFVADQLNRQKNAI
SKAIGEKMKKKEPQGTDDSVADDIVARLAELKIDELSQLTVVQLKKLRVLVDEKSVQTAA
AVIANENARHEKLIQIGNLIHSSVVVSKDEANNKIERTFGDLSTKKKYSHVDLVVMVDGF
DGERGTVVAGGRGYFLKGPLVFLEQAIIQLALQRLNVKGYVPLYTPFFMRKEVMQEVAQL
SQFDDELYKVSSKGSEIAGDTSVDEKYLIATSEQPIAAYHRNEWIKETELPIKYAGVSTC
FRQEVGSHGRDTRGIFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAESYYQELQIPYQ
VVNIVSGELNNAAAKKFDLEAWFPGSGAYRELVSCSNCLDYQSRRLKVRYGQTKKLSGEV
PFVHMLNATMCATTRVICAILENNQTEEGINVPTAIQQWMPENYRTFIPFVKPAPIDEDA
KKATGKK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggttctcgacattgacatgttccgtactgaaaagggtggaaacccagaaatcattcgt
aagtcgcagcaggaccgtttcaaggatccgaagttggtcgacgaagtgattgaattggat
gagaaatggagaaaggagagatttgtggctgatcaacttaatcgccagaagaatgctatt
tctaaagctattggggagaaaatgaagaagaaggaaccacaaggaacagacgattccgtt
gctgatgacattgtcgcacgtcttgctgaattgaaaattgatgagctgtctcagttaacc
gttgttcaactgaaaaagctcagagtccttgtcgatgagaagtctgttcaaactgcagct
gccgtcatcgccaacgaaaatgcacgccatgagaagctcattcaaatcggaaacttgatt
cactctagtgtcgtcgtatcaaaagatgaagctaacaacaaaattgagagaactttcgga
gatttaagcaccaagaagaagtattcacacgttgatttggttgtgatggttgatggcttt
gatggagagcgcggaacagttgttgctggaggtcgtggatatttcttgaagggcccactt
gtcttcttggagcaagctattattcagttagctctgcaacgtctcaatgtcaagggatac
gttccactatatactccatttttcatgaggaaagaggtcatgcaagaagttgctcaacta
agtcaattcgatgatgaactctacaaggtcagctcgaagggatcggaaatcgcaggtgat
acatctgtcgacgagaagtatttgattgcaacttctgaacagccaattgccgcctatcat
cgaaatgagtggatcaaagagactgagcttccaatcaaatatgctggtgtctccacttgc
ttccgacaagaagtcggaagtcacggtagagatacacgcggtattttccgtgttcatcaa
tttgaaaagatcgagcaattcgttctgtgcagtcccaacgataatgaatcatggacactc
ttcgatgagatgattggaaatgcagagagctattaccaggagcttcaaattccataccaa
gtcgtcaatattgtctctggagaactcaacaatgctgccgcgaaaaagttcgatttggaa
gcctggttcccaggatctggagcttatcgtgagcttgtttcgtgctctaactgcttggat
tatcaatcccggcgactcaaggttcgatatggacagaccaagaaactgagtggagaggtt
ccatttgtacatatgctcaacgcaacaatgtgtgctacaactcgtgtcatttgcgccatc
ctcgaaaataatcaaactgaagaaggaatcaatgtaccaaccgctattcaacaatggatg
ccagaaaactaccgtacattcattccattcgttaaaccagcgccgatcgacgaggatgcc
aaaaaggcgacaggaaagaaataa
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