Caenorhabditis elegans (nematode): CELE_W03B1.4
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Entry
CELE_W03B1.4 CDS
T00019
Symbol
sars-2
Name
(RefSeq) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CELE_W03B1.4 (sars-2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cel01007
]
CELE_W03B1.4 (sars-2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cel03016
]
CELE_W03B1.4 (sars-2)
Enzymes [BR:
cel01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CELE_W03B1.4 (sars-2)
Amino acid related enzymes [BR:
cel01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CELE_W03B1.4 (sars-2)
Transfer RNA biogenesis [BR:
cel03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CELE_W03B1.4 (sars-2)
Prokaryotic type
CELE_W03B1.4 (sars-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
177200
NCBI-ProteinID:
NP_500549
WormBase:
WBGene00005662
Ensembl:
WBGene00005662
UniProt:
G5EF77
LinkDB
All DBs
Position
IV:<4357636..>4359947
Genome browser
AA seq
441 aa
AA seq
DB search
MQRLSQALRSTRISQGIGFARRFTSSEASTSEESSSAPPVMRPDLNFEFLLDEKNLEAIR
ENILNRKGVGDIDKVHKKWAVIQKMMKSGEKQTNGAVSEQKYKQLWDELYDEAILIPNMT
QDGVPRGSEDQAKIVAEWGEKREDECLTAEKLVQTWRSLLHPTDASGQRSYVFLGALASL
EKALLDYAHERVCALGFRPITVPDIVSGEVTQACGVMQRSDHPIQYTLAGEESHTKLSGT
AEMGIAAFLRGRTFNQDQLPIRLVSLSRCFRTEISKSASEAKLYRVHEFSKVEMFVVSTP
EQSAAELDYLVEVQKGTFQALGVHCRQLEMPSEELGASAARKFDIEAWMPGRKLYGEVSS
ASNCTDFQSRRLGIKYKTADGTTKYAHTCNGTALASTRALISVLETFQNDKKGLGELPEP
LRKRVKQRGSPLRFQPAKSLV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagattaagccaagctcttcggagcactagaataagtcaaggaatcgggtttgcc
agaagattcacgtcatcagaagcttcaacatcagaagaaagctcatctgcaccgcctgtc
atgaggccagacttgaatttcgaatttttactggatgagaagaatttagaagcaattcga
gagaacattttaaatcgaaaaggagttggcgatattgacaaagtgcacaaaaaatgggcc
gtaattcaaaaaatgatgaaatccggtgaaaagcagacaaatggagctgtctccgagcaa
aaatataagcagctgtgggatgagctctacgatgaggcgattcttataccgaatatgaca
caggacggtgtgccacgtggcagtgaagatcaggcgaaaattgtggccgaatggggtgaa
aaacgagaagatgaatgtttgacagcggagaaattggtccaaacctggagatcactgctt
catccaactgatgcttcaggtcaacgctcttacgtattcctcggagccctggcaagtctg
gaaaaagcccttctggattatgctcacgaaagagtatgtgctctaggctttcgtccaatt
acagtacccgatatagtgtctggagaggtgacacaagcctgtggagttatgcaacgaagt
gatcatccaattcaatacaccttagctggagaagaatcacacacaaaactctcaggaact
gctgaaatgggaatcgccgcgtttttacggggacgaactttcaaccaagatcaacttccg
attcgattggtctcactgagtcgatgcttccgaactgagatcagcaagtcggcgagcgag
gcgaagttgtacagagttcatgagttcagcaaggttgagatgttcgtggtgagcacgccg
gagcaaagtgcggcagagctggattatttggtggaggtgcagaagggaacattccaggcg
ttgggtgttcattgcagacaacttgaaatgccatccgaagagcttggagcctctgccgcc
cggaaattcgacattgaagcttggatgccggggcgaaaactctacggagaggtttcatcg
gccagtaattgcacggatttccagtctcgacgcctcggaatcaagtataaaactgctgat
ggaacgacgaaatacgctcatacgtgtaatggaaccgctcttgcgtcgactagagctctc
atttctgtgctggaaacttttcagaatgacaaaaaaggactcggcgagcttccagaacct
cttcgaaaacgtgtcaagcaacgtggaagcccacttcgtttccaaccagcgaaatcactt
gtttag
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