Caenorhabditis elegans (nematode): CELE_Y49E10.15
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Entry
CELE_Y49E10.15 CDS
T00019
Symbol
snr-6
Name
(RefSeq) putative small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CELE_Y49E10.15 (snr-6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cel03019
]
CELE_Y49E10.15 (snr-6)
03041 Spliceosome [BR:
cel03041
]
CELE_Y49E10.15 (snr-6)
03032 DNA replication proteins [BR:
cel03032
]
CELE_Y49E10.15 (snr-6)
Messenger RNA biogenesis [BR:
cel03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
CELE_Y49E10.15 (snr-6)
Spliceosome [BR:
cel03041
]
Complex A
U1 snRNP components
Sm proteins
CELE_Y49E10.15 (snr-6)
U2 snRNP components
CELE_Y49E10.15 (snr-6)
Complex B
U1 snRNP components
CELE_Y49E10.15 (snr-6)
U4/U6.U5 tri-snRNP components
CELE_Y49E10.15 (snr-6)
Complex C
U2 snRNP components
CELE_Y49E10.15 (snr-6)
DNA replication proteins [BR:
cel03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
CELE_Y49E10.15 (snr-6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
176668
NCBI-ProteinID:
NP_499620
WormBase:
WBGene00004919
Ensembl:
WBGene00004919
UniProt:
Q9XTU6
LinkDB
All DBs
Position
III:complement(12429172..12429629)
Genome browser
AA seq
90 aa
AA seq
DB search
MSTRKLNKVMVQPVNLIFRYLQNRTRVQIWLYEDVTHRLEGYIIGFDEFMNVVFDEAEEV
NMKTKGRNKIGRILLKGDNITLIHAAQQEA
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgagaaagctcaacaaagtgatggttcagcctgtgaacctcatcttcagatat
ctccaaaaccgcactcgggtccaaatctggttgtacgaggatgtcacccaccgtctcgag
ggctacatcatcggattcgacgagttcatgaatgtcgtgttcgacgaagccgaggaggtg
aacatgaagacgaagggacgcaacaagatcggcagaattcttctcaaaggagacaacatc
actctcatccacgccgcccaacaagaagcctaa
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integrated database retrieval system