Caenorhabditis elegans (nematode): CELE_T26A5.5
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Entry
CELE_T26A5.5 CDS
T00019
Symbol
jhdm-1
Name
(RefSeq) JmjC domain-containing histone demethylation protein 1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
CELE_T26A5.5 (jhdm-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cel03000
]
CELE_T26A5.5 (jhdm-1)
04121 Ubiquitin system [BR:
cel04121
]
CELE_T26A5.5 (jhdm-1)
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_T26A5.5 (jhdm-1)
Enzymes [BR:
cel01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
CELE_T26A5.5 (jhdm-1)
Transcription factors [BR:
cel03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
CELE_T26A5.5 (jhdm-1)
Ubiquitin system [BR:
cel04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
CELE_T26A5.5 (jhdm-1)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
CELE_T26A5.5 (jhdm-1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
CELE_T26A5.5 (jhdm-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cupin_8
JmjC
JmjC_2
JHD
Cupin_1
Motif
Other DBs
NCBI-GeneID:
175919
NCBI-ProteinID:
NP_498418
WormBase:
WBGene00020821
Ensembl:
WBGene00020821
UniProt:
Q95Q98
LinkDB
All DBs
Position
III:<6454483..>6460014
Genome browser
AA seq
1149 aa
AA seq
DB search
MPPKRKSNGKTPANGKKGAKKARKESSSEHEHSASEGEETTGFDKSSLQRCVNFDFEALM
NDPSFQHPEFVHTMDPEALNLEFYDKNGLDNPIHFRCDPKRIGMTLPSPDFSVDDVLELV
GGNRMIEVVQVQNQGSVKMSLQEFINFYKTPQEKREVLYNVLSLEFSQTPLEDLVKSPEL
VRQIDWVGNQWPDALRQRWISFNGRDKKFYNPHHTFPKVQNYCLMSVANCYTDFHIDFSG
TSVWYHVLKGRKVFWLIPPTETNFFIYQEFIKTVNDNAFFGKSVEKCHVAILEPGDTMLI
PSGWIHAVYTPDDSLVFGGNFLHSQSCKTQLRVYQVENKLNITRKFRLPYNEELIFYVIA
DYVKQWTGREYVRPLRIEDAKYDYVGDKWKTAGGHHKKIEYSDYETGVELTNDMIKGDEE
STKDEVKVIAMHAENSLFGYPMVSKATFSADTGLEEEADEDEVKYQETKEEMDARRDAEI
DELANSNSLIFYKNRTHDFVRNKCVPDHKLPIGHEPPIYFNDDEISRISPRLLDELETLG
TYIRRKARVEVAEGICQPASLINTFQTVLKKRRSELTGKKFEFNQIMPRRYTRSTMETGE
YDFQPTQEVPQESARRSTRFKVDNFPDELLESEVTDKPIILPQQPSSGPLEYLPAPKDEI
KEDINGFEEEFEEEYEGIGQRDDQEEEEYDAEEPEDQEEEEEDEYQAEEYTPTPVTRRSS
SRRSGAKNDESEEVSVKKDKKEKMEKVEKDEKRRNSKSKKDKISKEKKKKERERIELESQ
LDAELRAAHGGGSSKSKKKKPEKPAFVGGLPTSSIQIDPVVSNPYNYDPRMEMMKLGTGQ
LKSAYRKTKNNVELHIEKNLYKIEPKRGSEEGSQSREQSMEPEHSTPVFTTFDDINEANN
DHYDGQKPPTKRAKYEAISVDTYETPSSSRNKEHKEYRPSPNAAPTPSPSHHQKPKLSSP
AMVSSTNEYQLRKHMSSERRSSDAGSAMKKGVYMPAMSRQDKMIAEGASAPSSRHSSISS
ERRPSFIPDFNSSRNSSIDTPYTPTTVTPSRSSWLPNTSSINRHSIEDDSPIDVVNDSLS
PINIASSPTYPTAITPPPVTLSDLKKDMSNGRKSHSQHHDDGHKHKIPSKEAIAELKLLV
GKLKAINDS
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgaaacggaaatcaaatggaaaaacgccagcgaacggtaaaaagggcgcaaag
aaggctaggaaagagtcaagttcagagcacgaacatagtgcttcagaaggtgaagaaact
actggattcgataagtcgtcacttcaacgatgtgtgaattttgatttcgaagctctgatg
aatgatccgtctttccaacatcccgaatttgtacatacaatggacccagaagctttaaat
ttggagttctacgacaaaaatggacttgacaacccgatacatttccgatgtgatccaaaa
agaataggaatgacacttccctcaccagatttctcagtggatgatgtcctcgaactggta
ggcggaaatcgaatgatagaagttgttcaagtccagaatcaaggaagtgtgaaaatgtcg
ttacaggaatttataaacttctacaaaacgccacaagaaaaacgagaagtactgtacaat
gttctatctctagaattttcccaaactcccttagaagatctcgtaaaatctccagaactt
gttcgtcaaatcgactgggttggaaaccagtggccagatgctctgcgccagaggtggatc
tcattcaacggaagagacaaaaaattctacaatccgcatcatacttttccaaaagttcaa
aactactgcctgatgagcgtagcgaactgttatacagattttcacattgattttagtgga
acatctgtgtggtatcatgtactgaaaggtcgtaaagtcttttggttgattccaccaacc
gaaaccaacttttttatttatcaagaatttattaaaactgtcaacgataatgcgttcttt
ggaaagtcggtcgaaaagtgccacgtggctatcttggagccaggagacacgatgctaatt
ccaagtggatggattcatgccgtatatactccagatgatagtctcgtttttggaggcaat
tttcttcactcacaatcatgcaaaacacaattaagagtttatcaagttgaaaataagttg
aatatcactagaaaatttcgcttaccgtacaatgaagaacttattttctacgttatagct
gattatgtaaaacaatggacaggaagagaatatgtgagaccacttcgaatcgaagatgca
aaatatgactatgttggagacaaatggaaaaccgctggtggccatcataagaaaatcgaa
tactcagattacgaaactggagttgaattgacaaacgatatgattaaaggagacgaggaa
tccacaaaagatgaagttaaagtgattgcaatgcacgcggagaattcactatttggttat
cctatggtcagcaaagcaacgttttcagctgacacgggtcttgaagaagaagctgacgaa
gatgaagtcaagtatcaagaaactaaagaagaaatggatgctcgacgcgatgctgaaatc
gatgaactagctaattcaaattcattaattttctacaagaaccgtacgcacgattttgtt
cgaaataaatgcgtgccggaccacaaacttccaattggacacgagccgccaatctacttt
aacgatgatgagatttctaggatatcccctcgacttttggatgaacttgaaactcttggc
acttatattcgtcgaaaagcacgtgtcgaagtggctgaaggaatatgccagccagcgtct
ctcattaacacattccaaactgttttgaaaaaaagacgttctgaattgacagggaagaaa
tttgaattcaaccagataatgcctcgaagatatactcgatccaccatggaaaccggtgaa
tatgacttccagccgacgcaagaagtaccacaagaatctgcgagaagaagcacaagattc
aaagttgataactttcccgatgagcttttagaatcggaagtgactgataagcctattata
ttgcctcaacaaccatcatcaggacctctcgaatatcttcctgcacccaaagatgaaatt
aaagaggatattaatggttttgaagaagaatttgaggaggaatatgaaggaattgggcaa
cgtgatgatcaggaggaagaggaatacgatgccgaagagccggaagatcaagaggaggaa
gaagaagatgaatatcaagccgaagaatatactccaactccagttacaagacgttctagt
tcaagacgttcaggtgctaaaaatgatgaatcagaagaagtgtcagtaaagaaggacaaa
aaggaaaagatggagaaagttgaaaaagacgagaagagaaggaattcgaagagtaagaaa
gacaaaatttcgaaggaaaagaagaagaaggagagagaacgtattgaattggaaagtcaa
ctcgatgcagagctcagagctgctcatggaggaggatcgagcaaatctaaaaagaaaaag
ccagagaagccggcatttgttggtggacttccaacttcatctattcaaatcgatccagtt
gtttcaaatccgtataactatgatcccagaatggagatgatgaagcttggaactggacag
ctcaagtcagcatacagaaaaacgaaaaataacgtcgaacttcatattgaaaagaatctc
tacaagattgagccgaaacgaggaagtgaggaaggaagtcaaagccgcgagcaaagtatg
gaaccagagcacagtactccagttttcacgacttttgatgatataaatgaagcaaataat
gatcattacgatggacagaagcctccaactaaaagagctaaatatgaggcaattagtgtt
gacacatatgaaactccatcgtcttcaagaaataaagaacacaaagaatatcgtcccagt
ccgaacgctgctccaactccatcaccatcccatcatcaaaaaccaaaactttcatctcca
gcaatggtctcatcgacaaacgaatatcagttacgaaaacacatgtcgagcgaacggcga
agcagtgatgcaggatcggcaatgaaaaagggcgtatatatgcctgcaatgtctcgtcag
gataagatgattgctgagggagcatctgctccctcgtcacgtcactcctcgatctcatct
gaacgtcgtccgagtttcatacctgatttcaactcttctcgtaattcatctattgataca
ccatacactccgactactgtaacaccttcaagatcttcttggctcccgaacacgtcgtcc
attaatcgtcactcaattgaagatgattctccaatagatgttgtcaatgattcattatca
ccaataaatatagccagctcgccgacctacccaactgcaatcactccaccaccggttact
ctcagcgatttgaagaaggatatgtcaaatggacgcaaaagtcatagtcagcatcatgac
gatgggcacaagcacaagattccatcaaaagaagcgattgcagagctgaagcttctcgtc
ggaaaacttaaagctatcaatgattcctag
DBGET
integrated database retrieval system
