Caenorhabditis elegans (nematode): CELE_C45B2.7
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Entry
CELE_C45B2.7 CDS
T00019
Symbol
ptr-4
Name
(RefSeq) SSD domain-containing protein
Organism
cel
Caenorhabditis elegans (nematode)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
DUF4538
ACR_tran
Motif
Other DBs
NCBI-GeneID:
180876
NCBI-ProteinID:
NP_509013
WormBase:
WBGene00004219
Ensembl:
WBGene00004219
UniProt:
Q95YD0
LinkDB
All DBs
Position
X:complement(6060758..6065986)
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AA seq
960 aa
AA seq
DB search
MRLSDYGKQFEDWMQKVFFKYGIFVAKHQFWFLIVPLALTVLSIPGLFYLQINLDLYRLF
VPTDAPVRYEFERTKDFNSLSQGDLSLTPKRNRREFDCEDGSCFLPDVEMDRLKRDLQAL
EDEARLDVPFGNASSMARYKRDVNKDKEKKERERKLIPAKHDILRFYVVHRKFDNLLQSK
YLGPLFQFTQDMMKVTNEFEDEVWGLEDFCTKDPGSASCNNNLNLWIKHADVLFKDGKIK
ANPNLQLSYPVLYLFNRPKDIGNVIYGVDVKGEKNEIQGARVLTIHWFVNYPATAENNRA
YYAYRQKLNEYWESISENIDLQFIPHNDKAMDDEMLEIIKTTVPFAFPATILLTIFVLSA
NYSSDRTKSKPIEMCVGVWCVIFALIITFGVFFFFGAKFNPVTSTMPFLVLAVGVDDDFL
MMAAWRECDRKHSPAIRLGFVMADAGASITVTSFTNFFCFFLGWFMCSTPAVADFCIITA
AGVFFDYLMQITFYAAILKYSGDREETGGLASCCYKKNDDDDEDVETQREQREQSEAAKE
KEENIDFAHHEKTLDLPYMHQFFRDTFAPFVMKKWVRVASLALFPIYTAFAIYGCSILRV
DISPVKYIRDNSPIQTFVALADKYIWADNVMPNFHIMSPPDLRDEGARNRLNELVYKLES
TKYSIGRVSTNLWVWQYQQYLNDFPHINYTSDFYDRKNLREFFSQLDYSQYRDKVKILDN
VTNGEPCISAFSFQTSFYGLDSWDKRQSELFYWRDILKEFPEFDMFLSGIFSPFLIDQRH
TIAPSSMQTIGSALAMMALISFFFLPDAQSVFLMTFSLLSISMGVCGGLALLGSDLDSVS
MGCIVMAIGLAVDYSVHICYRYHRSEYKTAQEKVADTLASVGWPVTQAVCSTLVGLAITV
FVPAYLVRVFFQTVYLVNIIGLFHALVWLPQLISALDPCERVPLRERDSLISKHIPLSLH
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttagcgactatggtaaacagtttgaagactggatgcaaaaggttttcttcaaa
tatggaatatttgttgcaaaacatcaattctggtttttaattgtacctctcgccctcaca
gttctttcgattcctggattattctacttacaaattaatcttgatctctatagattattc
gttccaacagatgcaccagtcagatatgaattcgaaagaacaaaagattttaacagtttg
tcacaaggagatctcagtctgacaccaaaaaggaatcgacgagagtttgattgtgaagat
ggctcatgcttcttgcctgatgttgaaatggacagactgaagcgagatcttcaagctttg
gaagatgaagctcgactagacgtgccgttcggaaacgcatcaagtatggcaagatataaa
agggatgtgaataaggataaggaaaagaaagaacgcgaaaggaaacttattcctgccaaa
catgatatccttcgattctacgttgttcatcggaaattcgacaatcttctgcaatcaaaa
tatcttggaccacttttccagttcactcaagacatgatgaaagtgacaaacgagtttgaa
gacgaagtttggggactcgaagatttttgtacgaaagatccaggctccgcgagctgcaat
aacaacttgaatctctggatcaagcatgctgatgttcttttcaaggatggaaaaataaag
gcaaacccgaatttgcaattatcctacccagtgttatatcttttcaatcgcccaaaagat
attggaaatgttatttacggagtcgatgtaaaaggagagaaaaacgagattcaaggagct
agagttttgaccattcattggtttgtcaactatccagcaactgctgaaaacaatcgagct
tattatgcctatcgtcagaagcttaatgaatactgggagtctatttcagaaaacattgat
cttcagttcattcctcacaatgacaaggctatggatgacgaaatgctggaaatcattaaa
accacggtaccttttgctttccctgcaactattcttcttacaatcttcgtgttgtcagcc
aattacagtagtgatagaacaaaatcgaaaccaattgaaatgtgcgtcggagtttggtgt
gtcatctttgccctcattatcacttttggagtgttcttcttcttcggagctaaatttaac
ccagttacttctacgatgccgttccttgtgttagccgtgggtgtcgatgacgatttcctg
atgatggctgcttggagagaatgtgaccggaaacattcccctgctatcaggttaggcttt
gtgatggctgacgctggagcttccatcacagttacatcattcaccaacttcttctgcttc
ttcctcggttggttcatgtgctcaaccccagctgtcgctgatttctgcattattaccgct
gccggagttttctttgactatttgatgcagattactttctatgctgctattctgaaatat
tctggagatcgcgaagaaactggaggtttggctagttgttgttacaagaaaaatgacgat
gatgatgaggacgtcgaaactcaacgcgagcaacgcgagcaatccgaagccgccaaggaa
aaagaagaaaatatcgattttgcacaccacgagaaaaccttggatttgccatacatgcac
cagttcttccgtgatacatttgcaccatttgtaatgaagaagtgggttcgtgtcgcatct
cttgccctgtttccaatctatactgcatttgcaatctatggatgctcgattctgagagtt
gatatttctcctgtcaagtacatcagagataactccccaattcagacgtttgtggctcta
gcagataagtatatttgggccgacaacgtgatgccaaacttccacatcatgtcacctcct
gatcttcgcgacgagggagcacgtaatagactgaatgagttggtttacaagcttgaaagc
acgaaatactctatcggaagagtatcaaccaacttgtgggtatggcagtaccagcaatat
ttgaacgattttcctcatatcaattacacttctgatttctatgatagaaagaatttaaga
gaattcttctctcagctggactactcccaatatagagataaggtaaaaatcttggataac
gtcacaaatggagaaccttgtatttctgcattctcattccaaacatctttctacggactt
gacagttgggacaagcggcagtctgaacttttctactggcgtgacattcttaaggaattc
ccagagtttgatatgttcctttctggaattttcagtccattcttgattgatcaacggcac
acaattgctccttcatctatgcaaacaattggctcagcgcttgccatgatggctctcatt
tctttcttcttcctaccagacgcgcaatccgtattcttgatgaccttttccttactctcc
atctcaatgggtgtgtgcggaggacttgctcttcttggctcagatttggactccgtcagt
atgggttgcattgttatggctatcggattggctgttgactactcggtacacatttgctat
agatatcacagatctgaatataaaacagcacaagaaaaagtggctgacacacttgcatcc
gtcggatggcccgtcactcaagccgtgtgctcaacattggtcggactagcaatcactgtt
tttgttccagcatatttagtacgagtattcttccaaactgtttatcttgtgaacatcatt
ggacttttccacgcgctcgtctggctaccacagctcatttctgcattggatccatgcgaa
cgtgttcctcttcgagaacgtgacagcctcatctcaaaacatattccactttcactccat
taa
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