KEGG   Caenorhabditis elegans (nematode): CELE_ZK593.7
Entry
CELE_ZK593.7      CDS       T00019                                 
Symbol
lsm-7
Name
(RefSeq) Sm domain-containing protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03018  RNA degradation
cel03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CELE_ZK593.7 (lsm-7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CELE_ZK593.7 (lsm-7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cel03019]
    CELE_ZK593.7 (lsm-7)
   03041 Spliceosome [BR:cel03041]
    CELE_ZK593.7 (lsm-7)
Messenger RNA biogenesis [BR:cel03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CELE_ZK593.7 (lsm-7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CELE_ZK593.7 (lsm-7)
Spliceosome [BR:cel03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    CELE_ZK593.7 (lsm-7)
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 177988
NCBI-ProteinID: NP_502034
WormBase: WBGene00003081
Ensembl: WBGene00003081
UniProt: Q23543
LinkDB
Position
IV:10933502..10934189
AA seq 104 aa
MSKDEGKRKKESVVDLTRFLDKEIRVKFQGGREASGVLRGFDQLLNMVLDDCREYLRDPQ
NPSVVGDETRQLGLIVARGTAITVVSPADGLEQIANPFATQEEE
NT seq 315 nt   +upstreamnt  +downstreamnt
atgtcgaaagacgaaggaaaacgaaagaaggagtctgtcgttgatctcaccagatttctc
gacaaagagattcgcgtcaagttccaaggaggacgtgaagcaagtggcgtgcttcgagga
ttcgatcagttgctcaatatggttcttgatgactgccgcgagtatctccgtgatccacaa
aatccttcggtcgtcggtgatgagacaagacaactgggtcttattgtggctcgcggaaca
gcaattacagtagttagcccagcagatggactcgagcaaatcgccaatccattcgcaacc
caggaagaagaataa

DBGET integrated database retrieval system