KEGG   Caenorhabditis elegans (nematode): CELE_C08B11.5
Entry
CELE_C08B11.5     CDS       T00019                                 
Symbol
sap-49
Name
(RefSeq) Splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CELE_C08B11.5 (sap-49)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cel03041]
    CELE_C08B11.5 (sap-49)
Spliceosome [BR:cel03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    CELE_C08B11.5 (sap-49)
 Complex B
    CELE_C08B11.5 (sap-49)
 Complex C
   U2 SnRNP specific factors
    CELE_C08B11.5 (sap-49)
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_5 OB_RNB
Other DBs
NCBI-GeneID: 4363023
NCBI-ProteinID: NP_001379265
WormBase: WBGene00004723
Ensembl: WBGene00004723
LinkDB
Position
II:complement(8034335..>8035767)
AA seq 388 aa
MSAGPIVERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVE
FMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTF
SAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKR
DSKGERHGTAAERMLAAQNPLFPKDRPHQVFSDVPLGVPANTPLAMPGVHAAIAAHATGR
PGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPP
PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP
GMYPPPPPSRPPAPPSGHGMIPPPPPPS
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgtcagcagggccgatagtggaaagaaaccaagatgcaacaatttacgttggtggatta
gacgagaaggtgtcagagtccatcctatgggaacttatggtacaagcaggacctgttgtc
agtgtcaatatgccgaaagatcgagtaactgccaatcatcaaggtttcggatttgtggag
ttcatgggagaagaagatgcagattatgcaatcaaaattttaaacatgatcaaattatac
ggaaagccaattaaagtgaacaaagcatcggctcatgaaaagaatatggatgttggtgca
aatatttttgttggaaatctggatccagaagtcgatgagaaattgctatacgatacgttc
agtgcttttggagttattcttcaagttccaaaaatcatgagagatgttgattcgggaacg
tctaaaggattcgcgttcatcaacttcgcttcattcgaagcttcagatacagcattagaa
gctatgaacggccaatttctttgcaatcgagctatcaccgtctcatacgctttcaagaga
gattcaaaaggagaaagacacggaacagcagcggagcgtatgctggctgcacaaaatcca
ctgtttccaaaagaccggccacatcaagtattttctgacgttccacttggtgttccagct
aacacacctttggccatgccaggagttcatgctgctattgctgctcatgcaacaggacgc
ccaggctatcaaccaccaccattgatgggaatggctcaatctggatatcaaggacaatat
ccaccagtaccaccacctccaccaagtgtgacaccaatgccacctccaatgccgccaacg
ccaggaatgactcctcgtccaccaccaccaccatcatctggaatgtggccgccaccacca
ccgcctccaccaggaagaactccaggaccaccaggtatgcctggtatgcctccaccacca
ccaccatcacgatttggtcctccaggaatgggtggaatgccgccgccacctccaccaggg
atgagatatccgggaggcatgccgccaccaccaccgccgcgatatccttctgctggacca
ggaatgtatccacctccaccaccaagtcgtcctccagcaccaccatctggtcatggaatg
atcccacctccaccacctccatcataa

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