Caenorhabditis elegans (nematode): CELE_C41C4.8
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Entry
CELE_C41C4.8 CDS
T00019
Symbol
cdc-48.2
Name
(RefSeq) Transitional endoplasmic reticulum ATPase homolog 2
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04137
Mitophagy - animal
cel04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CELE_C41C4.8 (cdc-48.2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
CELE_C41C4.8 (cdc-48.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cel03019
]
CELE_C41C4.8 (cdc-48.2)
03009 Ribosome biogenesis [BR:
cel03009
]
CELE_C41C4.8 (cdc-48.2)
04131 Membrane trafficking [BR:
cel04131
]
CELE_C41C4.8 (cdc-48.2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cel04147
]
CELE_C41C4.8 (cdc-48.2)
Messenger RNA biogenesis [BR:
cel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CELE_C41C4.8 (cdc-48.2)
Ribosome biogenesis [BR:
cel03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
CELE_C41C4.8 (cdc-48.2)
Membrane trafficking [BR:
cel04131
]
SNARE
SNARE associated proteins
Others
CELE_C41C4.8 (cdc-48.2)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CELE_C41C4.8 (cdc-48.2)
Exosome [BR:
cel04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CELE_C41C4.8 (cdc-48.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_14
AAA_22
TIP49
RNA_helicase
AAA_28
AAA_18
Mg_chelatase
Parvo_NS1
IstB_IS21
nSTAND3
Vps4_C
AAA_17
ABC_tran
AAA_7
AAA_25
Bac_DnaA
ATPase_2
UFD1
ResIII
Sigma54_activat
Sigma54_activ_2
NACHT
AAA_3
Zeta_toxin
TsaE
DUF815
Viral_helicase1
NB-ARC
Rad17
bpMoxR
Motif
Other DBs
NCBI-GeneID:
174309
NCBI-ProteinID:
NP_495705
WormBase:
WBGene00008053
Ensembl:
WBGene00008053
UniProt:
P54812
LinkDB
All DBs
Position
II:8138496..8141230
Genome browser
AA seq
810 aa
AA seq
DB search
MASVPTQRDEKEKKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRG
DSVILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSAQLEYGKRVH
VLPIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACI
VAPDTVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGV
KPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEK
NSPAILFIDEIDAIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDG
ALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLC
SEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTMENFRFAMGKSSPSALREAVVETPNTT
WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC
QANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGG
AADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQ
IFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQEKERQD
RSARGEELMEDELADPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNN
FKFPGEAPSAGQPVGGNGGSGGNDDDDLYN
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagttccgactcagagagacgagaaggaaaagaagaatgatgagctggctacg
gctatcttgaaagacaaaaaacgcccaaacagactcattatcgatcagtctgacaatgac
gacaactccatggtcatgctctcacaggccaaaatggacgagctgggactcttccgtgga
gattcggtgattttgaaaggaaagaaacgaagagagactgtctctatcgttcttaatgcg
gacaattgcccgaatgacaagatcaagatgaacaaagtggttcgaaacaacctcagaagc
cgtcttggagacgttgtcagtatctcaagtgctcaactcgaatatggaaaaagggttcat
gttcttccaattgatgacacaatcgagggattgactggaaatctatttgatgtcttcctt
cggccatactttaccgacgcctaccgcccagtgcacaagggagacatattcactgttcaa
gctgcaatgagaactgtcgagttcaaagttgtcgagacggatcctgctccggcgtgtatt
gttgctccagatactgttattcactatgaaggagatccaattaaaagagaggaagaagag
gaggctctcaatgaagttggatacgatgatctcggaggtgttcgtaaacaactcgctcag
atcaaggaaatggttgagctcccacttcgccatccccaacttttcaaggctatcggagtg
aaaccaccacgtggaattcttctgttcggtccaccaggaaccggtaagacactgatcgca
agagctgtcgccaacgaaacaggagcattcttcttcctcattaacggaccggaaattatg
tctaaaatgtctggagagtcggaatcgaatcttcgtaaagcatttgccgagtgtgagaag
aactcacctgctattttgttcattgacgagatcgatgcgattgctccaaagagagaaaag
gctcacggtgaagtcgagaagcgtatcgtctcgcaacttctcacacttatggatggactt
aaaactcgcgctcatgttgtcgtgatcgccgctactaatcgtcctaactctattgatgga
gcccttcgtcgtttcggtcgctttgatcgtgaaattgacattggaatccctgatgctgtt
ggccgtctggaaattctcagaattcataccaagaacatgaaattaggagaagacgttgat
ttggaacaagttgcaaacgaatgccacggatttgtcggagctgatttggcttccctctgc
tctgaggctgctattcagcaaattcgcgaaaagatggagctgattgatttggaggatgat
acaattgatgctgaagttctcaattctttggcggtcactatggagaactttagattcgca
atgggaaaatcatccccatctgctcttcgcgaagccgttgtggaaactccaaatactact
tggtccgacatcggaggtcttcaaaacgtcaagcgcgaacttcaggagctcgttcaatac
cctgtagagcatccagaaaagtatctcaagttcggaatgcaaccatctcgtggagttttg
ttctacggtccaccaggatgcggtaaaacacttctcgctaaagcgattgccaatgaatgc
caggctaacttcatttccatcaagggacccgagcttcttactatgtggttcggagaatcc
gaagctaatgttcgcgacgtgtttgataaagctcgtgctgccgctccatgcgttctcttc
tttgacgaactcgattcgatcgcaaaggccagaggaggaagtgtaggagatgctggaggt
gctgccgatcgtgttatcaaccaggttctcactgaaatggatggtatgaatgccaagaaa
aacgtgttcattattggagctaccaatcgtcctgatatcattgatccagctgttcttcgt
ccaggacgtctcgatcagttgatctacattcctcttcctgacgaagcatctagacttcaa
attttcaaggcctcactccgcaaaacgcccctttccgccgatctcgatttgaacttcctt
gccaagaacaccgtcggtttttcgggagccgacttaaccgaaatttgccaaagagcatgc
aagcttgccattcgtgaatcaattgaacgggaaattcgtcaggaaaaggagcgtcaggac
agaagtgctcgtggagaagaacttatggaggatgaactggctgacccagttccagaaata
actagagcacacttcgaggaggcaatgaagttcgctagacgttccgtgactgataacgat
atcagaaaatacgagatgttcgcccagactcttcaacaatctcgtggatttggaaacaac
ttcaagttcccaggagaagctccttctgctggacaacctgttggaggaaacggtggctcc
ggtggaaatgacgatgatgacctgtacaactag
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